The origins and mechanisms of karrikin signalling

Current Opinion in Plant Biology

Volumn 16, Issue 5, 2013, Pages 667-673

  Waters, Mark T ^a   Scaffidi, Adrian ^a   Flematti, Gavin R ^a   Smith, Steven M ^a  

^a UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS;

3 METHYL 2H FURO(2,3 C)PYRAN 2 ONE; 3-METHYL-2H-FURO(2,3-C)PYRAN-2-ONE; ARABIDOPSIS PROTEIN; FURAN DERIVATIVE; HTL PROTEIN, ARABIDOPSIS; HYDROLASE; LACTONE; PYRAN DERIVATIVE; STRIGOL;

ARABIDOPSIS; BIOLOGICAL MODEL; CHEMISTRY; GENETICS; METABOLISM; MOLECULAR EVOLUTION; PHYSIOLOGY; REVIEW; SIGNAL TRANSDUCTION;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; EVOLUTION, MOLECULAR; FURANS; HYDROLASES; LACTONES; MODELS, BIOLOGICAL; PYRANS; SIGNAL TRANSDUCTION;

EID: 84885372807     PISSN: 13695266     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pbi.2013.07.005     Document Type: Review

References (57)

1. Nelson D.C., Flematti G.R., Ghisalberti E.L., Dixon K.W., Smith S.M. Regulation of seed germination and seedling growth by chemical signals from burning vegetation. Ann Rev Plant Biol 2012, 63:107-130.
2. Flematti G.R., Ghisalberti E.L., Dixon K.W., Trengove R.D. A compound from smoke that promotes seed germination. Science 2004, 305:977.
3. Flematti G.R., Ghisalberti E.L., Dixon K.W., Trengove R.D. Identification of alkyl substituted 2H-furo[2,3-c]pyran-2-ones as germination stimulants present in smoke. J Agric Food Chem 2009, 57:9475-9480.
4. Flematti G.R., Scaffidi A., Dixon K.W., Smith S.M., Ghisalberti E.L. Production of the seed germination stimulant karrikinolide from combustion of simple carbohydrates. J Agric Food Chem 2011, 59:1195-1198.
5. Scaffidi A., Waters M.T., Skelton B.W., Bond C.S., Sobolev A.N., Bythell-Douglas R., McKinley A.J., Dixon K.W., Ghisalberti E.L., Smith S.M., et al. Solar irradiation of the seed germination stimulant karrikinolide produces two novel head-to-head cage dimers. Org Biomol Chem 2012, 10:4069-4073.
6. Cardoso C., Ruyter-Spira C., Bouwmeester H.J. Strigolactones and root infestation by plant-parasitic Striga, Orobanche and Phelipanche spp. Plant Sci 2011, 180:414-420.
7. Flematti G.R., Goddard-Borger E.D., Merritt D.J., Ghisalberti E.L., Dixon K.W., Trengove R.D. Preparation of 2H-furo[2,3-c]pyran-2-one derivatives and evaluation of their germination-promoting activity. J Agric Food Chem 2007, 55:2189-2194.
8. Flematti G.R., Scaffidi A., Goddard-Borger E.D., Heath C.H., Nelson D.C., Commander L.E., Stick R.V., Dixon K.W., Smith S.M., Ghisalberti E.L. Structure-activity relationship of karrikin germination stimulants. J Agric Food Chem 2010, 58:8612-8617.
9. Scaffidi A., Waters M.T., Bond C.S., Dixon K.W., Smith S.M., Ghisalberti E.L., Flematti G.R. Exploring the molecular mechanism of karrikins and strigolactones. Bioorg Med Chem Lett 2012, 22:3743-3746.
10. Nelson D.C., Riseborough J.-A., Flematti G.R., Stevens J., Ghisalberti E.L., Dixon K.W., Smith S.M. Karrikins discovered in smoke trigger Arabidopsis seed germination by a mechanism requiring gibberellic acid synthesis and light. Plant Physiol 2009, 149:863-873.
11. Zwanenburg B., Mwakaboko A.S., Reizelman A., Anilkumar G., Sethumadhavan D. Structure and function of natural and synthetic signalling molecules in parasitic weed germination. Pest Manag Sci 2009, 65:478-491.
12. Boyer F.-D., de Saint Germain A., Pillot J.-P., Pouvreau J.-B., Chen V.X., Ramos S., Stévenin A., Simier P., Delavault P., Beau J.-M., et al. Structure-activity relationship studies of strigolactone-related molecules for branching inhibition in garden pea: molecule design for shoot branching. Plant Physiol 2012, 159:1524-1544.
13. Fukui K., Ito S., Ueno K., Yamaguchi S., Kyozuka J., Asami T. New branching inhibitors and their potential as strigolactone mimics in rice. Bioorg Med Chem Lett 2011, 21:4905-4908.
14. Footitt S., Huang Z., Clay H.A., Mead A., Finch-Savage W.E. Temperature, light and nitrate sensing coordinate Arabidopsis seed dormancy cycling, resulting in winter and summer annual phenotypes. Plant J 2013, 10.1111/tpj.12186.
15. Merritt D., Turner S., Clarke S., Dixon K. Seed dormancy and germination stimulation syndromes for Australian temperate species. Aust J Bot 2007, 55:336-344.
16. Long R.L., Stevens J.C., Griffiths E.M., Adamek M., Gorecki M.J., Powles S.B., Merritt D.J. Seeds of Brassicaceae weeds have an inherent or inducible response to the germination stimulant karrikinolide. Ann Bot 2011, 108:933-944.
17. Nelson D.C., Flematti G.R., Riseborough J.-A., Ghisalberti E.L., Dixon K.W., Smith S.M. Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. Proc Natl Acad Sci U S A 2010, 107:7095-7100.
18. Nelson D.C., Scaffidi A., Dun E.A., Waters M.T., Flematti G.R., Dixon K.W., Beveridge C.A., Ghisalberti E.L., Smith S.M. F-box protein MAX2 has dual roles in karrikin and strigolactone signaling in Arabidopsis thaliana. Proc Natl Acad Sci U S A 2011, 108:8897-8902.
19. Sun X.-D., Ni M. HYPOSENSITIVE TO LIGHT, an alpha/beta fold protein, acts downstream of ELONGATED HYPOCOTYL 5 to regulate seedling de-etiolation. Mol Plant 2011, 4:116-126.
20. Arite T., Umehara M., Ishikawa S., Hanada A., Maekawa M., Yamaguchi S., Kyozuka J. d14, a strigolactone-insensitive mutant of rice, shows an accelerated outgrowth of tillers. Plant Cell Physiol 2009, 50:1416-1424.
21. Waters M.T., Nelson D.C., Scaffidi A., Flematti G.R., Sun Y.K., Dixon K.W., Smith S.M. Specialisation within the DWARF14 protein family confers distinct responses to karrikins and strigolactones in Arabidopsis. Development 2012, 139:1285-1295.
22. Nardini M., Dijkstra B.W. Alpha/beta hydrolase fold enzymes: the family keeps growing. Curr Opin Struct Biol 1999, 9:732-737.
23. Ueguchi-Tanaka M., Ashikari M., Nakajima M., Itoh H., Katoh E., Kobayashi M., Chow T.-Y., Hsing Y-IC, Kitano H., Yamaguchi I., et al. GIBBERELLIN INSENSITIVE DWARF1 encodes a soluble receptor for gibberellin. Nature 2005, 437:693-698.
24. Beveridge C.A., Kyozuka J. New genes in the strigolactone-related shoot branching pathway. Curr Opin Plant Biol 2010, 13:34-39.
25. Hamiaux C., Drummond Revel S.M., Janssen B.J., Ledger S.E., Cooney J.M., Newcomb R.D., Snowden K.C. DAD2 is an α/β hydrolase likely to be involved in the perception of the plant branching hormone, strigolactone. Curr Biol 2012, 22:2032-2036.
26. Zhao L.-H., Zhou X.E., Wu Z.-S., Yi W., Xu Y., Li S., Xu T.-H., Liu Y., Chen R.-Z., Kovach A., et al. Crystal structures of two phytohormone signal-transducing α/β hydrolases: karrikin-signaling KAI2 and strigolactone-signaling DWARF14. Cell Res 2013, 23:436-439.
27. Kagiyama M., Hirano Y., Mori T., Kim S.-Y., Kyozuka J., Seto Y., Yamaguchi S., Hakoshima T. Structures of D14 and D14L in the strigolactone and karrikin signaling pathways. Genes Cells 2013, 18:147-160.
28. Bythell-Douglas R., Waters M.T., Scaffidi A., Flematti G.R., Smith S.M., Bond C.S. The structure of the karrikin-insensitive protein (KAI2) in Arabidopsis thaliana. PLoS ONE 2013, 8:e54758.
29. Guo Y., Zheng Z., La Clair J.J., Chory J., Noel J.P. Smoke-derived karrikin perception by the α/β-hydrolase KAI2 from Arabidopsis. Proc Natl Acad Sci U S A 2013, 10.1073/pnas.1306265110.
30. Waters M.T., Smith S.M. KAI2- and MAX2-mediated responses to karrikins and strigolactones are largely independent of HY5 in Arabidopsis seedlings. Mol Plant 2013, 6:63-75.
31. Janssen B.J., Snowden K.C. Strigolactone and karrikin signal perception: receptors, enzymes, or both?. Front Plant Sci 2012, 3:296-309.
32. Delaux P.-M., Xie X., Timme R.E., Puech-Pagès V., Dunand C., Lecompte E., Delwiche C.F., Yoneyama K., Bécard G., Séjalon-Delmas N. Origin of strigolactones in the green lineage. New Phytol 2012, 195:857-871.
33. Bouwmeester H.J., Roux C., Lopez-Raez J.A., Bécard G. Rhizosphere communication of plants, parasitic plants and AM fungi. Trends Plant Sci 2007, 12:224-230.
34. Wang B., Qiu Y.-L. Phylogenetic distribution and evolution of mycorrhizas in land plants. Mycorrhiza 2006, 16:299-363.
35. Yoshida S., Kameoka H., Tempo M., Akiyama K., Umehara M., Yamaguchi S., Hayashi H., Kyozuka J., Shirasu K. The D3 F-box protein is a key component in host strigolactone responses essential for arbuscular mycorrhizal symbiosis. New Phytol 2012, 196:1208-1216.
36. Proust H., Hoffmann B., Xie X., Yoneyama K., Schaefer D.G., Yoneyama K., Nogué F., Rameau C. Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens. Development 2011, 138:1531-1539.
37. Kramer E.M. Patterns of gene duplication and functional evolution during the diversification of the AGAMOUS subfamily of MADS box genes in angiosperms. Genetics 2004, 166:1011-1023.
38. Zahn L.M. The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history. Genetics 2005, 169:2209-2223.
39. Glasspool I., Edwards D., Axe L. Charcoal in the Silurian as evidence for the earliest wildfire. Geology 2004, 32:381-383.
40. Scott A.C., Glasspool I.J. The diversification of Paleozoic fire systems and fluctuations in atmospheric oxygen concentration. Proc Natl Acad Sci U S A 2006, 103:10861-10865.
41. Lamont B.B., He T. Fire-adapted Gondwanan angiosperm floras evolved in the Cretaceous. BMC Evol Biol 2012, 12:223-233.
42. He T., Pausas J.G., Belcher C.M., Schwilk D.W., Lamont B.B. Fire-adapted traits of Pinusarose in the fiery Cretaceous. New Phytol 2012, 194:751-759.
43. Tomato Genome Consortium The tomato genome sequence provides insights into fleshy fruit evolution. Nature 2012, 485:635-641.
44. Flematti G.R., Merritt D.J., Piggott M.J., Trengove R.D., Smith S.M., Dixon K.W., Ghisalberti E.L. Burning vegetation produces cyanohydrins that liberate cyanide and stimulate seed germination. Nat Commun 2011, 2:360.
45. Baldwin I.T., Staszak-Kozinski L., Davidson R. Up in smoke: I. Smoke-derived germination cues for postfire annual, Nicotiana attenuata torr. Ex. Watson. J Chem Ecol 1994, 20:2345-2371.
46. Light M.E., Burger B.V., Staerk D., Kohout L., Van Staden J. Butenolides from plant-derived smoke: natural plant-growth regulators with antagonistic actions on seed germination. J Nat Prod 2010, 73:267-269.
47. Flematti G.R., Waters M.T., Scaffidi A., Merritt D.J., Ghisalberti E.L., Dixon K.W., Smith S.M. Karrikin and cyanohydrin smoke signals provide clues to new endogenous plant signaling compounds. Mol Plant 2013, 6:29-37.
48. Scaffidi A., Waters M.T., Ghisalberti E.L., Dixon K.W., Flematti G.R., Smith S.M. Carlactone-independent seedling morphogenesis in Arabidopsis. Plant J 2013, 10.1111/tpj.12265.
49. Shen H., Zhu L., Bu Q.-Y., Huq E. MAX2 affects multiple hormones to promote photomorphogenesis. Mol Plant 2012, 5:224-236.
50. Shinohara N., Taylor C., Leyser O. Strigolactone can promote or inhibit shoot branching by triggering rapid depletion of the auxin efflux protein PIN1 from the plasma membrane. PLoS Biol 2013, 11:e1001474.
51. Stirnberg P., van De Sande K., Leyser H.M.O. MAX1 and MAX2 control shoot lateral branching in Arabidopsis. Development 2002, 129:1131-1141.
52. Ishikawa S., Maekawa M., Arite T., Onishi K., Takamure I., Kyozuka J. Suppression of tiller bud activity in tillering dwarf mutants of rice. Plant Cell Physiol 2005, 46:79-86.
53. Woo H.R., Chung K.M., Park J.H., Oh S.A., Ahn T., Hong S.H., Jang S.K., Nam H.G. ORE9, an F-box protein that regulates leaf senescence in Arabidopsis. Plant Cell 2001, 13:1779-1790.
54. Drummond Revel S.M., Sheehan H., Simons J.L., Martínez-Sánchez N.M., Turner R.M., Putterill J., Snowden K.C. The expression of petunia strigolactone pathway genes is altered as part of the endogenous developmental program. Front Plant Sci 2012, 2.
55. Johnson X., Brcich T., Dun E.A., Goussot M., Haurogné K., Beveridge C.A., Rameau C. Branching genes are conserved across species. Genes controlling a novel signal in pea are coregulated by other long-distance signals. Plant Physiol 2006, 142:1014-1026.
56. Gao Z., Qian Q., Liu X., Yan M., Feng Q., Dong G., Liu J., Han B. Dwarf 88, a novel putative esterase gene affecting architecture of rice plant. Plant Mol Biol 2009, 71:265-276.
57. Liu W., Wu C., Fu Y., Hu G., Si H., Zhu L., Luan W., He Z., Sun Z. Identification and characterization of HTD2: a novel gene negatively regulating tiller bud outgrowth in rice. Planta 2009, 230:649-658.