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Volumn 84, Issue , 2014, Pages 406-419

Evaluation of group-specific, whole-brain atlas generation using Volume-based Template Estimation (VTE): Application to normal and Alzheimer's populations

Author keywords

MRI; Study specific atlas; Volume based Template Estimation (VTE); Volume surface analysis

Indexed keywords

ACCURACY; ADULT; AGED; ALZHEIMER DISEASE; ARTICLE; BRAIN SIZE; CLINICAL ARTICLE; CONTROLLED STUDY; FEMALE; HUMAN; IMAGE ANALYSIS; MALE; NEUROIMAGING; NORMAL HUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; POSTCENTRAL GYRUS; PRIMARY MOTOR CORTEX; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; SUBCORTEX; VOLUME BASED TEMPLATE ESTIMATION; ALGORITHM; AUDIOVISUAL EQUIPMENT; AUTOMATED PATTERN RECOGNITION; BAYES THEOREM; BIOLOGICAL MODEL; BRAIN; COMPUTER ASSISTED DIAGNOSIS; COMPUTER SIMULATION; DIFFERENTIAL DIAGNOSIS; IMAGE ENHANCEMENT; IMAGE SUBTRACTION; ORGAN SIZE; PATHOLOGY; PROCEDURES; REFERENCE VALUE; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; THREE DIMENSIONAL IMAGING;

EID: 84884944608     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2013.09.011     Document Type: Article
Times cited : (20)

References (60)
  • 1
    • 64949185299 scopus 로고    scopus 로고
    • Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy
    • Aljabar P., Heckemann R.A., Hammers A., Hajnal J.V., Rueckert D. Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy. Neuroimage 2009, 46:726-738.
    • (2009) Neuroimage , vol.46 , pp. 726-738
    • Aljabar, P.1    Heckemann, R.A.2    Hammers, A.3    Hajnal, J.V.4    Rueckert, D.5
  • 3
    • 4444258303 scopus 로고    scopus 로고
    • Research consent for cognitively impaired adults: recommendations for institutional review boards and investigators
    • Alzheimer's Association Research consent for cognitively impaired adults: recommendations for institutional review boards and investigators. Alzheimer Dis. Assoc. Disord. 2004, 18:171-175.
    • (2004) Alzheimer Dis. Assoc. Disord. , vol.18 , pp. 171-175
    • Alzheimer's Association1
  • 5
    • 7044239648 scopus 로고    scopus 로고
    • Geodesic estimation for large deformation anatomical shape averaging and interpolation
    • Avants B., Gee J.C. Geodesic estimation for large deformation anatomical shape averaging and interpolation. Neuroimage 2004, 23(Supplement 1):S139-S150.
    • (2004) Neuroimage , vol.23 , Issue.SUPPL. 1
    • Avants, B.1    Gee, J.C.2
  • 6
    • 33750942692 scopus 로고    scopus 로고
    • Computing an average anatomical atlas using LDDMM and geodesic shooting
    • Biomedical Imaging: Nano to Macro, 2006
    • Beg M.F., Khan A. Computing an average anatomical atlas using LDDMM and geodesic shooting. 3rd IEEE International Symposium on 2006, 1116-1119.
    • (2006) 3rd IEEE International Symposium on , pp. 1116-1119
    • Beg, M.F.1    Khan, A.2
  • 7
    • 5444276422 scopus 로고    scopus 로고
    • Computing large deformation metric mappings via geodesic flows of diffeomorphisms
    • Beg M.F., Michael I.M., Alain T., Laurent Y. Computing large deformation metric mappings via geodesic flows of diffeomorphisms. Int. J. Comput. Vis. 2005, 61:139-157.
    • (2005) Int. J. Comput. Vis. , vol.61 , pp. 139-157
    • Beg, M.F.1    Michael, I.M.2    Alain, T.3    Laurent, Y.4
  • 10
    • 0032769093 scopus 로고    scopus 로고
    • Cortical surface-based analysis. I. Segmentation and surface reconstruction
    • Dale A.M., Fischl B., Sereno M.I. Cortical surface-based analysis. I. Segmentation and surface reconstruction. Neuroimage 1999, 9:179-194.
    • (1999) Neuroimage , vol.9 , pp. 179-194
    • Dale, A.M.1    Fischl, B.2    Sereno, M.I.3
  • 14
    • 84861191169 scopus 로고    scopus 로고
    • Atlas-based analysis of resting-state functional connectivity: evaluation for reproducibility and multi-modal anatomy-function correlation studies
    • Faria A.V., Joel S.E., Zhang Y., Oishi K., van Zjil P.C.M., Miller M.I., Pekar J.J., Mori S. Atlas-based analysis of resting-state functional connectivity: evaluation for reproducibility and multi-modal anatomy-function correlation studies. NeuroImage 2012, 61:613-621.
    • (2012) NeuroImage , vol.61 , pp. 613-621
    • Faria, A.V.1    Joel, S.E.2    Zhang, Y.3    Oishi, K.4    van Zjil, P.C.M.5    Miller, M.I.6    Pekar, J.J.7    Mori, S.8
  • 15
    • 4043092663 scopus 로고    scopus 로고
    • Principal geodesic analysis for the study of nonlinear statistics of shape
    • Fletcher P.T., Conglin L., Pizer S.M., Sarang J. Principal geodesic analysis for the study of nonlinear statistics of shape. IEEE Trans. Med. Imaging 2004, 23:995-1005.
    • (2004) IEEE Trans. Med. Imaging , vol.23 , pp. 995-1005
    • Fletcher, P.T.1    Conglin, L.2    Pizer, S.M.3    Sarang, J.4
  • 16
    • 65549141835 scopus 로고    scopus 로고
    • The geometric median on Riemannian manifolds with application to robust atlas estimation
    • Fletcher P.T., Venkatasubramanian S., Joshi S. The geometric median on Riemannian manifolds with application to robust atlas estimation. Neuroimage 2009, 45:S143-S152.
    • (2009) Neuroimage , vol.45
    • Fletcher, P.T.1    Venkatasubramanian, S.2    Joshi, S.3
  • 19
    • 67651042555 scopus 로고    scopus 로고
    • Implicit reference-based group-wise image registration and its application to structural and functional MRI
    • Geng X., Christensen G.E., Gu H., Ross T.J., Yang Y. Implicit reference-based group-wise image registration and its application to structural and functional MRI. Neuroimage 2009, 47:1341-1351.
    • (2009) Neuroimage , vol.47 , pp. 1341-1351
    • Geng, X.1    Christensen, G.E.2    Gu, H.3    Ross, T.J.4    Yang, Y.5
  • 21
    • 0032298437 scopus 로고    scopus 로고
    • Computational anatomy: an emerging discipline
    • Grenander U., Miller M.I. Computational anatomy: an emerging discipline. Q. Appl. Math. 1998, 56:617-694.
    • (1998) Q. Appl. Math. , vol.56 , pp. 617-694
    • Grenander, U.1    Miller, M.I.2
  • 22
    • 33748784605 scopus 로고    scopus 로고
    • Automatic anatomical brain MRI segmentation combining label propagation and decision fusion
    • Heckemann R.A., Hajnal J.V., Aljabar P., Rueckert D., Hammers A. Automatic anatomical brain MRI segmentation combining label propagation and decision fusion. Neuroimage 2006, 33:115-126.
    • (2006) Neuroimage , vol.33 , pp. 115-126
    • Heckemann, R.A.1    Hajnal, J.V.2    Aljabar, P.3    Rueckert, D.4    Hammers, A.5
  • 25
    • 67649512401 scopus 로고    scopus 로고
    • Multi-atlas-based segmentation with local decision fusion - application to cardiac and aortic segmentation in CT scans
    • Isgum I., Staring M., Rutten A., Prokop M., Viergever M.A., van Ginneken B. Multi-atlas-based segmentation with local decision fusion - application to cardiac and aortic segmentation in CT scans. IEEE Trans. Med. Imaging 2009, 28:1000-1010.
    • (2009) IEEE Trans. Med. Imaging , vol.28 , pp. 1000-1010
    • Isgum, I.1    Staring, M.2    Rutten, A.3    Prokop, M.4    Viergever, M.A.5    van Ginneken, B.6
  • 27
    • 77952419496 scopus 로고    scopus 로고
    • ABSORB: atlas building by self-organized registration and bundling
    • Jia H., Wu G., Wang Q., Shen D. ABSORB: atlas building by self-organized registration and bundling. Neuroimage 2010, 51:1057-1070.
    • (2010) Neuroimage , vol.51 , pp. 1057-1070
    • Jia, H.1    Wu, G.2    Wang, Q.3    Shen, D.4
  • 28
    • 80054102992 scopus 로고    scopus 로고
    • Iterative multi-atlas-based multi-image segmentation with tree-based registration
    • Jia H., Yap P.-T., Shen D. Iterative multi-atlas-based multi-image segmentation with tree-based registration. Neuroimage 2012, 59:422-430.
    • (2012) Neuroimage , vol.59 , pp. 422-430
    • Jia, H.1    Yap, P.-T.2    Shen, D.3
  • 29
    • 7044260966 scopus 로고    scopus 로고
    • Unbiased diffeomorphic atlas construction for computational anatomy
    • Joshi S., Davis B., Jomier M., Gerig G. Unbiased diffeomorphic atlas construction for computational anatomy. Neuroimage 2004, 23:S151-S160.
    • (2004) Neuroimage , vol.23
    • Joshi, S.1    Davis, B.2    Jomier, M.3    Gerig, G.4
  • 32
    • 0017360990 scopus 로고
    • The measurement of observer agreement for categorical data
    • Landis J.R., Koch G.G. The measurement of observer agreement for categorical data. Biometrics 1977, 33:159-174.
    • (1977) Biometrics , vol.33 , pp. 159-174
    • Landis, J.R.1    Koch, G.G.2
  • 35
    • 33846630372 scopus 로고    scopus 로고
    • An unbiased iterative group registration template for cortical surface analysis
    • Lyttelton O., Boucher M., Robbins S., Evans A. An unbiased iterative group registration template for cortical surface analysis. Neuroimage 2007, 34:1535-1544.
    • (2007) Neuroimage , vol.34 , pp. 1535-1544
    • Lyttelton, O.1    Boucher, M.2    Robbins, S.3    Evans, A.4
  • 36
    • 45849088792 scopus 로고    scopus 로고
    • Bayesian template estimation in computational anatomy
    • Ma J., Miller M.I., Trouv A., Younes L. Bayesian template estimation in computational anatomy. Neuroimage 2008, 42:252-261.
    • (2008) Neuroimage , vol.42 , pp. 252-261
    • Ma, J.1    Miller, M.I.2    Trouv, A.3    Younes, L.4
  • 37
    • 77957846674 scopus 로고    scopus 로고
    • A Bayesian generative model for surface template estimation
    • (Article ID 974957)
    • Ma J., Miller M.I., Younes L. A Bayesian generative model for surface template estimation. Int. J. Biomed. Imaging 2010, 2010:14. (Article ID 974957).
    • (2010) Int. J. Biomed. Imaging , vol.2010 , pp. 14
    • Ma, J.1    Miller, M.I.2    Younes, L.3
  • 38
    • 77954625078 scopus 로고    scopus 로고
    • In-vivo measurement of cortical morphology: means and meanings
    • Mangin J.F., Jouvent E., Cachia A. In-vivo measurement of cortical morphology: means and meanings. Curr. Opin. Neurol. 2010, 23:359-367.
    • (2010) Curr. Opin. Neurol. , vol.23 , pp. 359-367
    • Mangin, J.F.1    Jouvent, E.2    Cachia, A.3
  • 41
    • 0036403673 scopus 로고    scopus 로고
    • On the metrics and Euler-Lagrange equations of computational anatomy
    • Miller M.I., Trouvé A., Younes L. On the metrics and Euler-Lagrange equations of computational anatomy. Annu. Rev. Biomed. Eng. 2002, 4:375-405.
    • (2002) Annu. Rev. Biomed. Eng. , vol.4 , pp. 375-405
    • Miller, M.I.1    Trouvé, A.2    Younes, L.3
  • 43
    • 0027425211 scopus 로고
    • The Clinical Dementia Rating (CDR): current version and scoring rules
    • Morris J.C. The Clinical Dementia Rating (CDR): current version and scoring rules. Neurology 1993, 43:2412-2414.
    • (1993) Neurology , vol.43 , pp. 2412-2414
    • Morris, J.C.1
  • 45
    • 33749642835 scopus 로고    scopus 로고
    • Intrinsic statistics on Riemannian manifolds: basic tools for geometric measurements
    • Pennec X. Intrinsic statistics on Riemannian manifolds: basic tools for geometric measurements. J. Math. Imaging Vis. 2006, 25:127-154.
    • (2006) J. Math. Imaging Vis. , vol.25 , pp. 127-154
    • Pennec, X.1
  • 46
    • 77952658238 scopus 로고    scopus 로고
    • Atlas generation for subcortical and ventricular structures with its applications in shape analysis
    • Qiu A., Brown T., Fischl B., Ma J., Miller M.I. Atlas generation for subcortical and ventricular structures with its applications in shape analysis. IEEE Trans. Image Process. 2010, 19:1539-1547.
    • (2010) IEEE Trans. Image Process. , vol.19 , pp. 1539-1547
    • Qiu, A.1    Brown, T.2    Fischl, B.3    Ma, J.4    Miller, M.I.5
  • 48
    • 1842452933 scopus 로고    scopus 로고
    • Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains
    • Rohlfing T., Brandt R., Menzel R., Maurer C.R. Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains. Neuroimage 2004, 21:1428-1442.
    • (2004) Neuroimage , vol.21 , pp. 1428-1442
    • Rohlfing, T.1    Brandt, R.2    Menzel, R.3    Maurer, C.R.4
  • 51
    • 0033961408 scopus 로고    scopus 로고
    • Mathematical/computational challenges in creating deformable and probabilistic atlases of the human brain
    • Thompson P.M., Woods R.P., Mega M.S., Toga A.W. Mathematical/computational challenges in creating deformable and probabilistic atlases of the human brain. Hum. Brain Mapp. 2000, 9:81-92.
    • (2000) Hum. Brain Mapp. , vol.9 , pp. 81-92
    • Thompson, P.M.1    Woods, R.P.2    Mega, M.S.3    Toga, A.W.4
  • 53
    • 27344452992 scopus 로고    scopus 로고
    • A population-average, landmark- and surface-based (PALS) atlas of human cerebral cortex
    • Van Essen D.C. A population-average, landmark- and surface-based (PALS) atlas of human cerebral cortex. Neuroimage 2005, 28:635-662.
    • (2005) Neuroimage , vol.28 , pp. 635-662
    • Van Essen, D.C.1
  • 55
    • 79957521924 scopus 로고    scopus 로고
    • SharpMean: groupwise registration guided by sharp mean image and tree-based registration
    • Wu G., Jia H., Wang Q., Shen D. SharpMean: groupwise registration guided by sharp mean image and tree-based registration. Neuroimage 2011, 56:1968-1981.
    • (2011) Neuroimage , vol.56 , pp. 1968-1981
    • Wu, G.1    Jia, H.2    Wang, Q.3    Shen, D.4
  • 56
    • 48749129352 scopus 로고    scopus 로고
    • Effects of registration regularization and atlas sharpness on segmentation accuracy
    • Yeo B.T.T., Sabuncu M.R., Desikan R., Fischl B., Golland P. Effects of registration regularization and atlas sharpness on segmentation accuracy. Med. Image Anal. 2008, 12:603-615.
    • (2008) Med. Image Anal. , vol.12 , pp. 603-615
    • Yeo, B.T.T.1    Sabuncu, M.R.2    Desikan, R.3    Fischl, B.4    Golland, P.5
  • 57
    • 0032050058 scopus 로고    scopus 로고
    • Computable elastic distances between shapes
    • Younes L. Computable elastic distances between shapes. SIAM J. Appl. Math. 1998, 58:565-586.
    • (1998) SIAM J. Appl. Math. , vol.58 , pp. 565-586
    • Younes, L.1
  • 60
    • 77953291272 scopus 로고    scopus 로고
    • Quantitative evaluation of LDDMM, FreeSurfer, and CARET for cortical surface mapping
    • Zhong J., Phua D.Y., Qiu A. Quantitative evaluation of LDDMM, FreeSurfer, and CARET for cortical surface mapping. Neuroimage 2010, 52:131-141.
    • (2010) Neuroimage , vol.52 , pp. 131-141
    • Zhong, J.1    Phua, D.Y.2    Qiu, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.