A computerized MRI biomarker quantification scheme for a canine model of Duchenne muscular dystrophy

International Journal of Computer Assisted Radiology and Surgery

Volumn 8, Issue 5, 2013, Pages 763-774

  Wang, Jiahui ^a   Fan, Zheng ^a   Vandenborne, Krista ^b   Walter, Glenn ^b   Shiloh Malawsky, Yael ^a   An, Hongyu ^a   Kornegay, Joe N ^a,d   Styner, Martin A ^a,c  

^a UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF FLORIDA   (United States)

^c University of North Carolina   (United States)

^d TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Canine model; Duchenne muscular dystrophy; Golden retriever muscular dystrophy; MRI; Segmentation; Statistical texture analysis

Indexed keywords

BIOLOGICAL MARKER;

ACCURACY; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; AUTOMATION; CONTROLLED STUDY; DISEASE COURSE; DOG; DUCHENNE MUSCULAR DYSTROPHY; GOLDEN RETRIEVER MUSCULAR DYSTROPHY; IMAGE ANALYSIS; IMAGE DISPLAY; IMAGE PROCESSING; IMAGE QUALITY; MOLECULAR IMAGING; MUSCLE MASS; MUSCULAR DYSTROPHY; NONHUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; NUCLEAR MAGNETIC RESONANCE SCANNER; PRIORITY JOURNAL; PROCESS DEVELOPMENT;

ANIMALS; BIOLOGICAL MARKERS; DISEASE PROGRESSION; DOGS; MAGNETIC RESONANCE IMAGING; MUSCLE, SKELETAL; MUSCULAR DYSTROPHY, ANIMAL; MUSCULAR DYSTROPHY, DUCHENNE;

EID: 84884910403     PISSN: 18616410     EISSN: 18616429     Source Type: Journal    
DOI: 10.1007/s11548-012-0810-6     Document Type: Article

References (39)

1. Moser H (1984) Duchenne muscular dystrophy: pathogenetic aspects and genetic prevention. Hum Genet 66:17-40
2. Hoffman EP, Brown RH Jr, Kunkel LM (1987) Dystrophin: the protein product of the Duchenne muscular dystrophy locus. Cell 51:919-928
3. Koenig M, Hoffman EP, Bertelson CJ, Monaco AP, Feener C, Kunkel LM (1987) Complete cloning of the Duchenne muscular dystrophy (DMD) cDNA and preliminary genomic organization of the DMD gene in normal and affected individuals. Cell 50:509-517
4. Bulfield G, Siller WG, Wight PA, Moore KJ (1984) X chromosome-linked muscular dystrophy (mdx) in the mouse. Proc Natl Acad Sci USA 81:1189-1192
5. Gaschen FP, Hoffman EP, Gorospe JR, Uhl EW, Senior DF, Cardinet GH 3rd, Pearce LK (1992) Dystrophin deficiency causes lethal muscle hypertrophy in cats. J Neurol Sci 110:149-159
6. Kornegay JN, Tuler SM, Miller DM, Levesque DC (1988) Muscular dystrophy in a litter of golden retriever dogs. Muscle Nerve 11:1056-1064
7. Cooper BJ, Winand NJ, Stedman H, Valentine BA, Hoffman EP, Kunkel LM, Scott MO, Fischbeck KH, Kornegay JN, Avery RJ, Williams JR, Schmickel RD, Sylvester JE (1988) The homologue of the Duchenne locus is defective in X-linked muscular dystrophy of dogs. Nature 334:154-156
8. Kornegay JN, Bogan JR, Bogan DJ, Childers MK, Li J, Nghiem P, Detwiler DA, Larsen CA, Grange RW, Bhavaraju-Sanka RK, Tou S, Keene BP, Howard JF Jr, Wang J, Fan Z, Schatzberg SJ, Styner MA, Flanigan KM, Xiao X, Hoffman EP (2012) Canine models of Duchenne muscular dystrophy and their use in therapeutic strategies. Mamm Genome 23:85-108
9. Kobayashi M, Nakamura A, Hasegawa D, Fujita M, Orima H, Takeda S (2009) Evaluation of dystrophic dog pathology by fat-suppressed T2-weighted imaging. Muscle Nerve 40:815-826
10. Thibaud JL, Monnet A, Bertoldi D, Barthelemy I, Blot S, Carlier PG (2007) Characterization of dystrophic muscle in golden retriever muscular dystrophy dogs by nuclear magnetic resonance imaging. Neuromuscul Disord 17:575-584
11. Yokota T, Lu QL, Partridge T, Kobayashi M, Nakamura A, Takeda S, Hoffman E (2009) Efficacy of systemic morpholino exon-skipping in Duchenne dystrophy dogs. Ann Neurol 65:667-676
12. Lamminen AE (1990) Magnetic resonance imaging of primary skeletal muscle diseases: patterns of distribution and severity of involvement. Br J Radiol 63:946-950
13. Lovitt S, Moore SL, Marden FA (2006) The use of MRI in the evaluation of myopathy. Clin Neurophysiol 117:486-495
14. Marden FA, Connolly AM, Siegel MJ, Rubin DA (2005) Compositional analysis of muscle in boys with Duchenne muscular dystrophy using MR imaging. Skeletal Radiol 34:140-148
15. Liu GC, Jong YJ, Chiang CH, Jaw TS (1993) Duchenne muscular dystrophy: MR grading system with functional correlation. Radiology 186:475-480
16. Karpati G, Ajdukovic D, Arnold D, Gledhill RB, Guttmann R, Holland P, Koch PA, Shoubridge E, Spence D, Vanasse M, Watters GV, Abrahamowicz M, Duff C, Worton RG (1993) Myoblast transfer in Duchenne muscular dystrophy. Ann Neurol 34: 8-17
17. Miller RG, Sharma KR, Pavlath GK, Gussoni E, Mynhier M, Lanctot AM, Greco CM, Steinman L, Blau HM (1997) Myoblast implantation in Duchenne muscular dystrophy: the San Francisco study. Muscle Nerve 20:469-478
18. Mathur S, Lott DJ, Senesac C (2010) Age-related differences in lower-limb muscle cross-sectional area and torque production in boys with Duchenne muscular dystrophy. Arch Phys Med Rehabil 91:1051-1058
19. Kornegay JN, Cundiff DD, Bogan DJ, Bogan JR, Okamura CS (2003) The cranial sartorius muscle undergoes true hypertrophy in dogs with golden retriever muscular dystrophy. Neuromuscul Disord 13:493-500
20. Childers MK, Okamura CS, Bogan DJ, Bogan JR, Sullivan MJ, Kornegay JN (2001) Myofiber injury and regeneration in a canine homologue of Duchenne muscular dystrophy. Am J Phys Med Rehabil 80:175-181
21. Wang J, Fan Z, Kornegay J, Styner M (2011) MRI-based quantification of Duchenne muscular dystrophy in a canine model. Proc SPIE Med Imaging 7965:79650G1-79650G9
22. Yushkevich PA, Piven J, Hazlett HC, Smith RG, Ho S, Gee JC, Gerig G (2006) User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability. Neuroimage 31:1116-1128
23. Hou Z (2006) A review on MR image intensity inhomogeneity correction. Proc Int J Biomed Imaging 2006:49515-1-49515-11
24. Tustison NJ, Avants BB, Cook PA, Zheng Y, Egan A, Yushkevich PA, Gee JC (2010) N4ITK: improved N3 bias correction. IEEE Trans Med Imaging 29:1310-1320
25. Sled JG, Zijdenbos AP, Evans AC (1998) A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans Med Imaging 17:87-97
26. Kim HK, Laor T, Horn PS, Racadio JM, Wong B, Dardzinski BJ (2010) T2 mapping in Duchenne muscular dystrophy: distribution of disease activity and correlation with clinical assessments. Radiology 255:899-908
27. Pluim JP, Maintz JB, Viergever MA (2003) Mutual-information-based registration of medical images: a survey. IEEE Trans Med Imaging 22:986-1004
28. Perona P, Malik J (1990) Scale-space and edge detection using anisotropic diffusion. IEEE Trans Pattern Anal Mach Intell 12: 629-639
29. Chuah TK, Poh CL, Sheah K (2011) Quantitative texture analysis of MRI images for detection of cartilage-related bone marrow edema. Proc IEEE Eng Med Biol Soc 2011:5112-5115
30. Mayerhoefer ME, Schima W, Trattnig S, Pinker K, Berger-Kulemann V, Ba-Ssalamah A (2010) Texture-based classification of focal liver lesions on MRI at 3.0 Tesla: a feasibility study in cysts and hemangiomas. J Magn Reson Imaging 32:352-359
31. Holli K, Laaperi AL, Harrison L, Luukkaala T, Toivonen T, Ryymin P, Dastidar P, Soimakallio S, Eskola H (2010) Characterization of breast cancer types by texture analysis of magnetic resonance images. Acad Radiol 17:135-141
32. Zhang J, Yu C, Jiang G, Liu W, Tong L (2012) 3D texture analysis on MRI images of Alzheimer's disease. Brain Imaging Behav 6:61-69
33. Herlidou S, Rolland Y, Bansard JY, Le Rumeur E, De Certaines JD (1999) Comparison of automated and visual texture analysis in MRI: characterization of normal and diseased skeletal muscle. Magn Reson Imaging 17:1393-1397
34. Mahmoud-Ghoneim D, Cherel Y, Lemaire L, De Certaines JD, Maniere A (2006) Texture analysis of magnetic resonance images of rat muscles during atrophy and regeneration. Magn Reson Imaging 24:167-171
35. Galloway M (1975) Texture analysis using gray level run lengths. Comput Graph Imaging Proc 4:172-179
36. Bryk AS, Raudenbush SW (1992) Hierarchical linear models: applications and data analysis methods. Sage, Newbury Park
37. Tegeler C, Grange R, Bogan D, Markert C, Case D, Kornegay J, Childers M (2010) Eccentric contractions induce rapid isometric torque drop in dystrophic-deficient dogs. Muscle Nerve 42:130-132
38. Childers M, Bogan J, Bogan D, Greiner H, Holder M, Grange R, Kornegay J (2011) Chronic administration of a leupeptin-derived calpain inhibitor fails to ameliorate severe muscle pathology in a canine model of Duchenne muscular dystrophy. Front Pharmacol 2:89
39. Abramoff M, Magalhaes P, Ram S (2004) Image processing with image J. Biophoton Intern 11:36-42