Long-observation-window band-selective homonuclear decoupling: Increased sensitivity and resolution in solid-state NMR spectroscopy of proteins

Journal of Magnetic Resonance

Volumn 236, Issue , 2013, Pages 89-94

  Struppe, Jochem O ^a   Yang, Chen ^b   Wang, Yachong ^b   Hernandez, Roy V ^c   Shamansky, Lisa M ^c   Mueller, Leonard J ^b  

^a BRUKER BIOSPIN CORPORATION   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c CALIFORNIA STATE UNIVERSITY   (United States)

Author keywords

Band selective homonuclear decoupling; Correlation spectroscopy; Increased resolution; Increased sensitivity; Protein solid state NMR

Indexed keywords

AMINO ACIDS; CORRELATION METHODS; LIGHT POLARIZATION; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY;

BAND-SELECTIVE; BAND-SELECTIVE HOMONUCLEAR DECOUPLING; CORRELATION SPECTROSCOPY; HOMONUCLEAR DECOUPLING; INCREASED RESOLUTION; INCREASED SENSITIVITY; OBSERVATION WINDOW; PROTEIN SOLID-STATE NMR; SOLID STATE NMR; SOLID-STATE NMR SPECTROSCOPY;

PROTEINS;

CARBON; GLYCINE; GUANINE NUCLEOTIDE BINDING PROTEIN; IMMUNOGLOBULIN G; PROTEIN; TRYPTOPHAN SYNTHASE;

ARTICLE; BAND-SELECTIVE HOMONUCLEAR DECOUPLING; CHEMISTRY; CORRELATION SPECTROSCOPY; ENZYMOLOGY; INCREASED RESOLUTION; INCREASED SENSITIVITY; ISOTOPE LABELING; METHODOLOGY; NUCLEAR MAGNETIC RESONANCE; PROTEIN SOLID-STATE NMR; SALMONELLA TYPHIMURIUM; SIGNAL NOISE RATIO;

BAND-SELECTIVE HOMONUCLEAR DECOUPLING; CORRELATION SPECTROSCOPY; INCREASED RESOLUTION; INCREASED SENSITIVITY; PROTEIN SOLID-STATE NMR;

CARBON ISOTOPES; GLYCINE; GTP-BINDING PROTEINS; IMMUNOGLOBULIN G; ISOTOPE LABELING; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PROTEINS; SALMONELLA TYPHIMURIUM; SIGNAL-TO-NOISE RATIO; TRYPTOPHAN SYNTHASE;

EID: 84884767347     PISSN: 10907807     EISSN: 10960856     Source Type: Journal    
DOI: 10.1016/j.jmr.2013.09.001     Document Type: Article

References (38)

1. V. Chevelkov, Z.J. Chen, W. Bermel, and B. Reif Resolution enhancement in MAS solid-state NMR by application of C-13 homonuclear scalar decoupling during acquisition J. Magn. Reson. 172 2005 56 62
2. R. Verel, T. Manolikas, A.B. Siemer, and B.H. Meier Improved resolution in C-13 solid-state spectra through spin-state-selection J. Magn. Reson. 184 2007 322 329 (Pubitemid 46177662)
3. 13C-labeled proteins J. Am. Chem. Soc. 131 2009 10816 10817
4. T.I. Igumenova, and A.E. McDermott Homo-nuclear C-13 J-decoupling in uniformly C-13-enriched solid proteins J. Magn. Reson. 175 2005 11 20 (Pubitemid 40753503)
5. L.C. Shi, X.H. Peng, M.A.M. Ahmed, D. Edwards, L.S. Brown, and V. Ladizhansky Resolution enhancement by homonuclear J-decoupling: application to three-dimensional solid-state magic angle spinning NMR spectroscopy J. Biomol. NMR 41 2008 9 15
6. C. Kehlet, J.T. Nielsen, Z. Tosner, and N.C. Nielsen Resolution-enhanced solid-state NMR C-13-C-13 correlation spectroscopy by optimal control dipolar-driven spin-state-selective coherence transfer J. Phys. Chem. Lett. 2 2011 543 547
7. L. Chen, J.M. Kaiser, T. Polenova, J. Yang, C.M. Rienstra, and L.J. Mueller Backbone assignments in solid-state proteins using J-based 3D heteronuclear correlation spectroscopy J. Am. Chem. Soc. 129 2007 10650 10651 (Pubitemid 350067463)
8. L.L. Chen, J.M. Kaiser, J.F. Lai, T. Polenova, J. Yang, C.M. Rienstra, and L.J. Mueller J-based 2D homonuclear and heteronuclear correlation in solid-state proteins Magn. Reson. Chem. 45 2007 S84 S92
9. L.L. Chen, R.A. Olsen, D.W. Elliott, J.M. Boettcher, D.H.H. Zhou, C.M. Rienstra, and L.J. Mueller Constant-time through-bond C-13 correlation spectroscopy for assigning protein resonances with solid-state NMR spectroscopy J. Am. Chem. Soc. 128 2006 9992 9993 (Pubitemid 44201066)
10. M.M. Maricq, and J.S. Waugh NMR in rotating solids J. Chem. Phys. 70 1979 3300 3316
11. A. McDermott, T. Polenova, A. Bockmann, K.W. Zilm, E.K. Paulsen, R.W. Martin, and G.T. Montelione Partial NMR assignments for uniformly (C-13, N-15)-enriched BPTI in the solid state J. Biomol. NMR 16 2000 209 219 (Pubitemid 30217109)
12. S.K. Straus, T. Bremi, and R.R. Ernst Resolution enhancement by homonuclear J decoupling in solid-state MAS NMR Chem. Phys. Lett. 262 1996 709 715 (Pubitemid 126161571)
13. Y. Li, B.J. Wylie, and C.M. Rienstra Selective refocusing pulses in magic-angle spinning NMR: characterization and applications to multi-dimensional protein spectroscopy J. Magn. Reson. 179 2006 206 216
14. W. Bermel, I. Bertini, I.C. Felli, R. Kummerle, and R. Pierattelli C-13 direct detection experiments on the paramagnetic oxidized monomeric copper, zinc superoxide dismutase J. Am. Chem. Soc. 125 2003 16423 16429 (Pubitemid 38020667)
15. G. De Paepe, N. Giraud, A. Lesage, P. Hodgkinson, A. Bockmann, and L. Emsley Transverse dephasing optimized solid-state NMR spectroscopy J. Am. Chem. Soc. 125 2003 13938 13939 (Pubitemid 37420881)
16. L. Zhong, V.V. Bamm, M.A.M. Ahmed, G. Harauz, and V. Ladizhansky Solid-state NMR spectroscopy of 18.5 kDa myelin basic protein reconstituted with lipid vesicles: Spectroscopic characterisation and spectral assignments of solvent-exposed protein fragments Biochim. Biophys. Biomembr. 1768 2007 3193 3205 (Pubitemid 350236084)
17. L. Duma, S. Hediger, B. Brutscher, A. Bockmann, and L. Emsley Resolution enhancement in multidimensional solid-state NMR spectroscopy of proteins using spin-state selection J. Am. Chem. Soc. 125 2003 11816 11817 (Pubitemid 37175405)
18. L. Duma, S. Hediger, A. Lesage, and L. Emsley Spin-state selection in solid-state NMR J. Magn. Reson. 164 2003 187 195
19. N.C. Nielsen, H. Thogersen, and O.W. Sorensen Doubling the sensitivity of inadequate for tracing out the carbon skeleton of molecules by NMR J. Am. Chem. Soc. 117 1995 11365 11366
20. I. Bertini, L. Emsley, I.C. Felli, S. Laage, A. Lesage, J.R. Lewandowski, A. Marchetti, R. Pierattelli, and G. Pintacuda High-resolution and sensitivity through-bond correlations in ultra-fast magic angle spinning (MAS) solid-state NMR Chem. Sci. 2 2011 345 348
21. A.L. Webber, A.J. Pell, E. Barbet-Massin, M.J. Knight, I. Bertini, I.C. Felli, R. Pierattelli, L. Emsley, A. Lesage, and G. Pintacuda Combination of DQ and ZQ coherences for sensitive through-bond NMR correlation experiments in biosolids under ultra-fast MAS ChemPhysChem 13 2012 2405 2411
22. E. Barbet-Massin, A.J. Pell, M.J. Knight, A.L. Webber, I.C. Felli, R. Pierattelli, L. Emsley, A. Lesage, and G. Pintacuda 13C-detected through-bond correlation experiments for protein resonance assignment by ultra-fast MAS solid-state NMR ChemPhysChem 2013 10.1002/cphc.201201097
23. J.P. Jesson, P. Meakin, and G. Kneissel Homonuclear decoupling and peak elimination in Fourier-transform nuclear magnetic-resonance J. Am. Chem. Soc. 95 1973 618 620
24. A. Hammarstrom, and G. Otting Improved spectral resolution in H-1-Nmr spectroscopy by homonuclear semiselective shaped pulse decoupling during acquisition J. Am. Chem. Soc. 116 1994 8847 8848
25. B. Vogeli, H. Kovacs, and K. Pervushin Simultaneous H-1- or H-2-, N-15- and multiple-band-selective C-13-decoupling during acquisition in C-13-detected experiments with proteins and oligonucleotides J. Biomol. NMR 31 2005 1 9 (Pubitemid 40796346)
26. W.T. Franks, D.H. Zhou, B.J. Wylie, B.G. Money, D.T. Graesser, H.L. Frericks, G. Sahota, and C.M. Rienstra Magic-angle spinning solid-state NMR spectroscopy of the beta 1 immunoglobulin binding domain of protein G (GB1): N-15 and C-13 chemical shift assignments and conformational analysis J. Am. Chem. Soc. 127 2005 12291 12305 (Pubitemid 41279253)
27. Y. Tian, L.L. Chen, D. Niks, J.M. Kaiser, J.F. Lai, C.M. Rienstra, M.F. Dunn, and L.J. Mueller J-based 3D sidechain correlation in solid-state proteins Phys. Chem. Chem. Phys. 11 2009 7078 7086
28. E.W. Miles, R. Bauerle, and S.A. Ahmed Tryptophan synthase from Escherichia coli and Salmonella typhimurium Methods Enzymol. 142 1987 398 414
29. Y. Yamagata, K. Ogasahara, Y. Hioki, S.J. Lee, A. Nakagawa, H. Nakamura, M. Ishida, S. Kuramitsu, and K. Yutani Entropic stabilization of the tryptophan synthase alpha-subunit from a hyperthermophile, Pyrococcus furiosus - X-ray analysis and calorimetry J. Biol. Chem. 276 2001 11062 11071 (Pubitemid 38089288)
30. A. Detken, E.H. Hardy, M. Ernst, and B.H. Meier Simple and efficient decoupling in magic-angle spinning solid-state NMR: the XiX scheme Chem. Phys. Lett. 356 2002 298 304
31. M. Baldus, A.T. Petkova, J. Herzfeld, and R.G. Griffin Cross polarization in the tilted frame: assignment and spectral simplification in heteronuclear spin systems Mol. Phys. 95 1998 1197 1207 (Pubitemid 128495249)
32. L. Emsley, and G. Bodenhausen Phase-shifts induced by transient Bloch-Siegert effects in Nmr Chem. Phys. Lett. 168 1990 297 303
33. R.N. Bracewell The Fourier Transform and Its Applications 2000 McGraw Hill Boston
34. G.A. Morris, H. Barjat, and T.J. Horne Reference deconvolution methods Prog. Nucl. Magn. Reson. Spectrosc. 31 1997 197 257 (Pubitemid 127427695)
35. D. Moskau Application of real time digital filters in NMR spectroscopy Concepts Magn. Reson. 15 2002 164 176
36. P. Andersson, J. Weigelt, and G. Otting Spin-state selection filters for the measurement of heteronuclear one-bond coupling constants J. Biomol. NMR 12 1998 435 441 (Pubitemid 128511309)
37. M. Ottiger, F. Delaglio, and A. Bax Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra J. Magn. Reson. 131 1998 373 378 (Pubitemid 128450579)
38. W. Bermel, I. Bertini, L. Duma, I.C. Felli, L. Emsley, R. Pierattelli, and P.R. Vasos Complete assignment of heteronuclear protein resonances by protonless NMR spectroscopy Angew. Chem., Int. Ed. 44 2005 3089 3092 (Pubitemid 40689850)