-
1
-
-
41849139980
-
Prediction of human disease genes by human-mouse conserved coexpression analysis
-
10.1371/journal.pcbi.1000043, 2268251, 18369433
-
Ala U, Piro RM, Grassi E, Damasco C, Silengo L, Oti M, Provero P, Di Cunto F. Prediction of human disease genes by human-mouse conserved coexpression analysis. PLoS Comput Biol 2008, 4(3):e1000043. 10.1371/journal.pcbi.1000043, 2268251, 18369433.
-
(2008)
PLoS Comput Biol
, vol.4
, Issue.3
-
-
Ala, U.1
Piro, R.M.2
Grassi, E.3
Damasco, C.4
Silengo, L.5
Oti, M.6
Provero, P.7
Di Cunto, F.8
-
2
-
-
77952811111
-
Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations
-
10.1016/j.ygeno.2010.03.002, 20211243
-
Hume DA, Summers KM, Raza S, Baillie JK, Freeman TC. Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations. Genomics 2010, 95(6):328-338. 10.1016/j.ygeno.2010.03.002, 20211243.
-
(2010)
Genomics
, vol.95
, Issue.6
, pp. 328-338
-
-
Hume, D.A.1
Summers, K.M.2
Raza, S.3
Baillie, J.K.4
Freeman, T.C.5
-
3
-
-
49249095893
-
Functional annotation and identification of candidate disease genes by computational analysis of normal tissue gene expression data
-
10.1371/journal.pone.0002439, 2409962, 18560577
-
Miozzi L, Piro RM, Rosa F, Ala U, Silengo L, Di Cunto F, Provero P. Functional annotation and identification of candidate disease genes by computational analysis of normal tissue gene expression data. PLoS One 2008, 3(6):e2439. 10.1371/journal.pone.0002439, 2409962, 18560577.
-
(2008)
PLoS One
, vol.3
, Issue.6
-
-
Miozzi, L.1
Piro, R.M.2
Rosa, F.3
Ala, U.4
Silengo, L.5
Di Cunto, F.6
Provero, P.7
-
4
-
-
80054818700
-
An atlas of tissue-specific conserved coexpression for functional annotation and disease gene prediction
-
10.1038/ejhg.2011.96, 3198151, 21654723
-
Piro RM, Ala U, Molineris I, Grassi E, Bracco C, Perego GP, Provero P, Di Cunto F. An atlas of tissue-specific conserved coexpression for functional annotation and disease gene prediction. Eur J Hum Genet 2011, 19(11):1173-1180. 10.1038/ejhg.2011.96, 3198151, 21654723.
-
(2011)
Eur J Hum Genet
, vol.19
, Issue.11
, pp. 1173-1180
-
-
Piro, R.M.1
Ala, U.2
Molineris, I.3
Grassi, E.4
Bracco, C.5
Perego, G.P.6
Provero, P.7
Di Cunto, F.8
-
5
-
-
77958451137
-
Co-expression of FBN1 with mesenchyme-specific genes in mouse cell lines: implications for phenotypic variability in Marfan syndrome
-
10.1038/ejhg.2010.91, 2987476, 20551991
-
Summers KM, Raza S, van Nimwegen E, Freeman TC, Hume DA. Co-expression of FBN1 with mesenchyme-specific genes in mouse cell lines: implications for phenotypic variability in Marfan syndrome. Eur J Hum Genet 2010, 18(11):1209-1215. 10.1038/ejhg.2010.91, 2987476, 20551991.
-
(2010)
Eur J Hum Genet
, vol.18
, Issue.11
, pp. 1209-1215
-
-
Summers, K.M.1
Raza, S.2
van Nimwegen, E.3
Freeman, T.C.4
Hume, D.A.5
-
6
-
-
44249093277
-
Expression analysis of G protein-coupled receptors in mouse macrophages
-
10.1186/1745-7580-4-5, 2394514, 18442421
-
Lattin JE, Schroder K, Su AI, Walker JR, Zhang J, Wiltshire T, Saijo K, Glass CK, Hume DA, Kellie S, et al. Expression analysis of G protein-coupled receptors in mouse macrophages. Immunome Res 2008, 4:5. 10.1186/1745-7580-4-5, 2394514, 18442421.
-
(2008)
Immunome Res
, vol.4
, pp. 5
-
-
Lattin, J.E.1
Schroder, K.2
Su, A.I.3
Walker, J.R.4
Zhang, J.5
Wiltshire, T.6
Saijo, K.7
Glass, C.K.8
Hume, D.A.9
Kellie, S.10
-
7
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
10.1073/pnas.0400782101, 395923, 15075390
-
Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, Block D, Zhang J, Soden R, Hayakawa M, Kreiman G, et al. A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci USA 2004, 101(16):6062-6067. 10.1073/pnas.0400782101, 395923, 15075390.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.16
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
-
8
-
-
80052965910
-
A high-resolution molecular atlas of the fetal mouse lower urogenital trac
-
10.1002/dvdy.22730, 3583531, 21905163
-
Abler LL, Keil KP, Mehta V, Joshi PS, Schmitz CT, Vezina CM. A high-resolution molecular atlas of the fetal mouse lower urogenital trac. Dev Dyn 2011, 240(10):2364-2377. 10.1002/dvdy.22730, 3583531, 21905163.
-
(2011)
Dev Dyn
, vol.240
, Issue.10
, pp. 2364-2377
-
-
Abler, L.L.1
Keil, K.P.2
Mehta, V.3
Joshi, P.S.4
Schmitz, C.T.5
Vezina, C.M.6
-
9
-
-
84867330689
-
EMouseAtlas, EMAGE, and the spatial dimension of the transcriptome
-
10.1007/s00335-012-9407-1, 3463796, 22847374
-
Armit C, Venkataraman S, Richardson L, Stevenson P, Moss J, Graham L, Ross A, Yang Y, Burton N, Rao J, et al. eMouseAtlas, EMAGE, and the spatial dimension of the transcriptome. Mamm Genome 2012, 23:514-524. 10.1007/s00335-012-9407-1, 3463796, 22847374.
-
(2012)
Mamm Genome
, vol.23
, pp. 514-524
-
-
Armit, C.1
Venkataraman, S.2
Richardson, L.3
Stevenson, P.4
Moss, J.5
Graham, L.6
Ross, A.7
Yang, Y.8
Burton, N.9
Rao, J.10
-
10
-
-
80051898233
-
A transcriptomic atlas of mouse neocortical layers
-
10.1016/j.neuron.2011.06.039, 3163272, 21867878
-
Belgard TG, Marques AC, Oliver PL, Abaan HO, Sirey TM, Hoerder-Suabedissen A, Garcia-Moreno F, Molnar Z, Margulies EH, Ponting CP. A transcriptomic atlas of mouse neocortical layers. Neuron 2011, 71(4):605-616. 10.1016/j.neuron.2011.06.039, 3163272, 21867878.
-
(2011)
Neuron
, vol.71
, Issue.4
, pp. 605-616
-
-
Belgard, T.G.1
Marques, A.C.2
Oliver, P.L.3
Abaan, H.O.4
Sirey, T.M.5
Hoerder-Suabedissen, A.6
Garcia-Moreno, F.7
Molnar, Z.8
Margulies, E.H.9
Ponting, C.P.10
-
11
-
-
79851473886
-
A high-resolution anatomical atlas of the transcriptome in the mouse embryo
-
10.1371/journal.pbio.1000582, 3022534, 21267068
-
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, et al. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol 2011, 9(1):e1000582. 10.1371/journal.pbio.1000582, 3022534, 21267068.
-
(2011)
PLoS Biol
, vol.9
, Issue.1
-
-
Diez-Roux, G.1
Banfi, S.2
Sultan, M.3
Geffers, L.4
Anand, S.5
Rozado, D.6
Magen, A.7
Canidio, E.8
Pagani, M.9
Peluso, I.10
-
12
-
-
77957991364
-
An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation
-
10.1186/gb-2010-11-10-r102, 3218658, 20961407
-
Harhay GP, Smith TP, Alexander LJ, Haudenschild CD, Keele JW, Matukumalli LK, Schroeder SG, Van Tassell CP, Gresham CR, Bridges SM, et al. An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation. Genome Biol 2010, 11(10):R102. 10.1186/gb-2010-11-10-r102, 3218658, 20961407.
-
(2010)
Genome Biol
, vol.11
, Issue.10
-
-
Harhay, G.P.1
Smith, T.P.2
Alexander, L.J.3
Haudenschild, C.D.4
Keele, J.W.5
Matukumalli, L.K.6
Schroeder, S.G.7
Van Tassell, C.P.8
Gresham, C.R.9
Bridges, S.M.10
-
13
-
-
84867331416
-
High-resolution gene expression atlases for adult and developing mouse brain and spinal cord
-
10.1007/s00335-012-9406-2, 22832508
-
Henry AM, Hohmann JG. High-resolution gene expression atlases for adult and developing mouse brain and spinal cord. Mamm Genome 2012, 23:539-549. 10.1007/s00335-012-9406-2, 22832508.
-
(2012)
Mamm Genome
, vol.23
, pp. 539-549
-
-
Henry, A.M.1
Hohmann, J.G.2
-
14
-
-
84859740873
-
RNA-Seq Atlas--a reference database for gene expression profiling in normal tissue by next-generation sequencing
-
10.1093/bioinformatics/bts084, 22345621
-
Krupp M, Marquardt JU, Sahin U, Galle PR, Castle J, Teufel A. RNA-Seq Atlas--a reference database for gene expression profiling in normal tissue by next-generation sequencing. Bioinformatics 2012, 28(8):1184-1185. 10.1093/bioinformatics/bts084, 22345621.
-
(2012)
Bioinformatics
, vol.28
, Issue.8
, pp. 1184-1185
-
-
Krupp, M.1
Marquardt, J.U.2
Sahin, U.3
Galle, P.R.4
Castle, J.5
Teufel, A.6
-
15
-
-
77952871864
-
A genomic atlas of mouse hypothalamic development
-
10.1038/nn.2545, 20436479
-
Shimogori T, Lee DA, Miranda-Angulo A, Yang Y, Wang H, Jiang L, Yoshida AC, Kataoka A, Mashiko H, Avetisyan M, et al. A genomic atlas of mouse hypothalamic development. Nat Neurosci 2010, 13(6):767-775. 10.1038/nn.2545, 20436479.
-
(2010)
Nat Neurosci
, vol.13
, Issue.6
, pp. 767-775
-
-
Shimogori, T.1
Lee, D.A.2
Miranda-Angulo, A.3
Yang, Y.4
Wang, H.5
Jiang, L.6
Yoshida, A.C.7
Kataoka, A.8
Mashiko, H.9
Avetisyan, M.10
-
16
-
-
37249049422
-
AGEMAP: a gene expression database for aging in mice
-
10.1371/journal.pgen.0030201, 2098796, 18081424
-
Zahn JM, Poosala S, Owen AB, Ingram DK, Lustig A, Carter A, Weeraratna AT, Taub DD, Gorospe M, Mazan-Mamczarz K, et al. AGEMAP: a gene expression database for aging in mice. PLoS Genet 2007, 3(11):e201. 10.1371/journal.pgen.0030201, 2098796, 18081424.
-
(2007)
PLoS Genet
, vol.3
, Issue.11
-
-
Zahn, J.M.1
Poosala, S.2
Owen, A.B.3
Ingram, D.K.4
Lustig, A.5
Carter, A.6
Weeraratna, A.T.7
Taub, D.D.8
Gorospe, M.9
Mazan-Mamczarz, K.10
-
17
-
-
84868693721
-
A gene expression atlas of the domestic pig
-
10.1186/1741-7007-10-90, 23153189
-
Freeman TC, Ivens A, Baillie JK, Beraldi D, Barnett MW, Dorward D, Downing A, Fairbairn L, Kapetanovic R, Raza S, et al. A gene expression atlas of the domestic pig. BMC Biol 2012, 10:90. 10.1186/1741-7007-10-90, 23153189.
-
(2012)
BMC Biol
, vol.10
, pp. 90
-
-
Freeman, T.C.1
Ivens, A.2
Baillie, J.K.3
Beraldi, D.4
Barnett, M.W.5
Dorward, D.6
Downing, A.7
Fairbairn, L.8
Kapetanovic, R.9
Raza, S.10
-
18
-
-
79957869585
-
The mononuclear phagocyte system of the pig as a model for understanding human innate immunity and disease
-
10.1189/jlb.1110607, 21233410
-
Fairbairn L, Kapetanovic R, Sester DP, Hume DA. The mononuclear phagocyte system of the pig as a model for understanding human innate immunity and disease. J Leukoc Biol 2011, 89(6):855-871. 10.1189/jlb.1110607, 21233410.
-
(2011)
J Leukoc Biol
, vol.89
, Issue.6
, pp. 855-871
-
-
Fairbairn, L.1
Kapetanovic, R.2
Sester, D.P.3
Hume, D.A.4
-
19
-
-
77955412944
-
Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations
-
Mabbott NA, Kenneth Baillie J, Hume DA, Freeman TC. Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations. Immunobiology 2010, 215(9-10):724-736.
-
(2010)
Immunobiology
, vol.215
, Issue.9-10
, pp. 724-736
-
-
Mabbott, N.A.1
Kenneth Baillie, J.2
Hume, D.A.3
Freeman, T.C.4
-
20
-
-
42649110359
-
A pattern recognition approach to infer time-lagged genetic interactions
-
10.1093/bioinformatics/btn098, 18337258
-
Chuang CL, Jen CH, Chen CM, Shieh GS. A pattern recognition approach to infer time-lagged genetic interactions. Bioinformatics 2008, 24(9):1183-1190. 10.1093/bioinformatics/btn098, 18337258.
-
(2008)
Bioinformatics
, vol.24
, Issue.9
, pp. 1183-1190
-
-
Chuang, C.L.1
Jen, C.H.2
Chen, C.M.3
Shieh, G.S.4
-
21
-
-
84880150201
-
A novel harmony search-K means hybrid algorithm for clustering gene expression data
-
10.6026/97320630009084, 3563403, 23390351
-
Nazeer KA, Sebastian M, Kumar SM. A novel harmony search-K means hybrid algorithm for clustering gene expression data. Bioinformation 2013, 9(2):84-88. 10.6026/97320630009084, 3563403, 23390351.
-
(2013)
Bioinformation
, vol.9
, Issue.2
, pp. 84-88
-
-
Nazeer, K.A.1
Sebastian, M.2
Kumar, S.M.3
-
22
-
-
6944244084
-
A module map showing conditional activity of expression modules in cancer
-
10.1038/ng1434, 15448693
-
Segal E, Friedman N, Koller D, Regev A. A module map showing conditional activity of expression modules in cancer. Nat Genet 2004, 36(10):1090-1098. 10.1038/ng1434, 15448693.
-
(2004)
Nat Genet
, vol.36
, Issue.10
, pp. 1090-1098
-
-
Segal, E.1
Friedman, N.2
Koller, D.3
Regev, A.4
-
23
-
-
33645292598
-
A library of gene expression signatures to illuminate normal and pathological lymphoid biology
-
10.1111/j.0105-2896.2006.00373.x, 16623765
-
Shaffer AL, Wright G, Yang L, Powell J, Ngo V, Lamy L, Lam LT, Davis RE, Staudt LM. A library of gene expression signatures to illuminate normal and pathological lymphoid biology. Immunol Rev 2006, 210:67-85. 10.1111/j.0105-2896.2006.00373.x, 16623765.
-
(2006)
Immunol Rev
, vol.210
, pp. 67-85
-
-
Shaffer, A.L.1
Wright, G.2
Yang, L.3
Powell, J.4
Ngo, V.5
Lamy, L.6
Lam, L.T.7
Davis, R.E.8
Staudt, L.M.9
-
24
-
-
0141993704
-
A gene-coexpression network for global discovery of conserved genetic modules
-
10.1126/science.1087447, 12934013
-
Stuart JM, Segal E, Koller D, Kim SK. A gene-coexpression network for global discovery of conserved genetic modules. Science 2003, 302(5643):249-255. 10.1126/science.1087447, 12934013.
-
(2003)
Science
, vol.302
, Issue.5643
, pp. 249-255
-
-
Stuart, J.M.1
Segal, E.2
Koller, D.3
Kim, S.K.4
-
26
-
-
35748937331
-
Construction, visualisation, and clustering of transcription networks from microarray expression data
-
2041979, 17967053
-
Freeman TC, Goldovsky L, Brosch M, van Dongen S, Maziere P, Grocock RJ, Freilich S, Thornton J, Enright AJ. Construction, visualisation, and clustering of transcription networks from microarray expression data. PLoS Comput Biol 2007, 3(10):2032-2042. 2041979, 17967053.
-
(2007)
PLoS Comput Biol
, vol.3
, Issue.10
, pp. 2032-2042
-
-
Freeman, T.C.1
Goldovsky, L.2
Brosch, M.3
van Dongen, S.4
Maziere, P.5
Grocock, R.J.6
Freilich, S.7
Thornton, J.8
Enright, A.J.9
-
27
-
-
73349116606
-
Network visualization and analysis of gene expression data using BioLayout express(3D)
-
10.1038/nprot.2009.177, 19798086
-
Theocharidis A, van Dongen S, Enright AJ, Freeman TC. Network visualization and analysis of gene expression data using BioLayout express(3D). Nat Protoc 2009, 4(10):1535-1550. 10.1038/nprot.2009.177, 19798086.
-
(2009)
Nat Protoc
, vol.4
, Issue.10
, pp. 1535-1550
-
-
Theocharidis, A.1
van Dongen, S.2
Enright, A.J.3
Freeman, T.C.4
-
28
-
-
77955902701
-
Gene enrichment profiles reveal T-cell development, differentiation, and lineage-specific transcription factors including ZBTB25 as a novel NF-AT repressor
-
10.1182/blood-2010-01-263855, 2902135, 20410506
-
Benita Y, Cao Z, Giallourakis C, Li C, Gardet A, Xavier RJ. Gene enrichment profiles reveal T-cell development, differentiation, and lineage-specific transcription factors including ZBTB25 as a novel NF-AT repressor. Blood 2010, 115(26):5376-5384. 10.1182/blood-2010-01-263855, 2902135, 20410506.
-
(2010)
Blood
, vol.115
, Issue.26
, pp. 5376-5384
-
-
Benita, Y.1
Cao, Z.2
Giallourakis, C.3
Li, C.4
Gardet, A.5
Xavier, R.J.6
-
29
-
-
34548719076
-
Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes
-
10.1038/ng2119, 17873875
-
Goring HH, Curran JE, Johnson MP, Dyer TD, Charlesworth J, Cole SA, Jowett JB, Abraham LJ, Rainwater DL, Comuzzie AG, et al. Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes. Nat Genet 2007, 39(10):1208-1216. 10.1038/ng2119, 17873875.
-
(2007)
Nat Genet
, vol.39
, Issue.10
, pp. 1208-1216
-
-
Goring, H.H.1
Curran, J.E.2
Johnson, M.P.3
Dyer, T.D.4
Charlesworth, J.5
Cole, S.A.6
Jowett, J.B.7
Abraham, L.J.8
Rainwater, D.L.9
Comuzzie, A.G.10
-
30
-
-
78751497385
-
Regulation and deregulation of mRNA translation during myeloid maturation
-
Khanna-Gupta R. Regulation and deregulation of mRNA translation during myeloid maturation. ExpHematol 2011, 39:133-141.
-
(2011)
ExpHematol
, vol.39
, pp. 133-141
-
-
Khanna-Gupta, R.1
-
31
-
-
84860339073
-
The Sam68 STAR RNA-binding protein regulates mTOR alternative splicing during adipogenesis
-
10.1016/j.molcel.2012.02.007, 22424772
-
Huot ME, Vogel G, Zabarauskas A, Ngo CT, Coulombe-Huntington J, Majewski J, Richard S. The Sam68 STAR RNA-binding protein regulates mTOR alternative splicing during adipogenesis. Mol Cell 2012, 46(2):187-199. 10.1016/j.molcel.2012.02.007, 22424772.
-
(2012)
Mol Cell
, vol.46
, Issue.2
, pp. 187-199
-
-
Huot, M.E.1
Vogel, G.2
Zabarauskas, A.3
Ngo, C.T.4
Coulombe-Huntington, J.5
Majewski, J.6
Richard, S.7
-
32
-
-
27944490900
-
The PCNA-associated factor KIAA0101/p15(PAF) binds the potential tumor suppressor product p33ING1b
-
10.1016/j.yexcr.2005.09.020, 16288740
-
Simpson F, Lammerts Van Bueren K, Butterfield N, Bennetts JS, Bowles J, Adolphe C, Simms LA, Young J, Walsh MD, Leggett B, et al. The PCNA-associated factor KIAA0101/p15(PAF) binds the potential tumor suppressor product p33ING1b. Exp Cell Res 2006, 312(1):73-85. 10.1016/j.yexcr.2005.09.020, 16288740.
-
(2006)
Exp Cell Res
, vol.312
, Issue.1
, pp. 73-85
-
-
Simpson, F.1
Lammerts Van Bueren, K.2
Butterfield, N.3
Bennetts, J.S.4
Bowles, J.5
Adolphe, C.6
Simms, L.A.7
Young, J.8
Walsh, M.D.9
Leggett, B.10
-
33
-
-
84862275734
-
Identification of novel mitosis regulators through data mining with human centromere/kinetochore proteins as group queries
-
10.1186/1471-2121-13-15, 3419070, 22712476
-
Tipton AR, Wang K, Oladimeji P, Sufi S, Gu Z, Liu ST. Identification of novel mitosis regulators through data mining with human centromere/kinetochore proteins as group queries. BMC Cell Biol 2012, 13:15. 10.1186/1471-2121-13-15, 3419070, 22712476.
-
(2012)
BMC Cell Biol
, vol.13
, pp. 15
-
-
Tipton, A.R.1
Wang, K.2
Oladimeji, P.3
Sufi, S.4
Gu, Z.5
Liu, S.T.6
-
34
-
-
79851492288
-
Multiple faces of FoxM1 transcription factor: lessons from transgenic mouse models
-
10.4161/cc.10.3.14709, 3115014, 21270518
-
Kalin TV, Ustiyan V, Kalinichenko VV. Multiple faces of FoxM1 transcription factor: lessons from transgenic mouse models. Cell Cycle 2011, 10(3):396-405. 10.4161/cc.10.3.14709, 3115014, 21270518.
-
(2011)
Cell Cycle
, vol.10
, Issue.3
, pp. 396-405
-
-
Kalin, T.V.1
Ustiyan, V.2
Kalinichenko, V.V.3
-
35
-
-
80052901782
-
Network calisthenics: control of E2F dynamics in cell cycle entry
-
10.4161/cc.10.18.17350, 3218619, 21900750
-
Wong JV, Dong P, Nevins JR, Mathey-Prevot B, You L. Network calisthenics: control of E2F dynamics in cell cycle entry. Cell Cycle 2011, 10(18):3086-3094. 10.4161/cc.10.18.17350, 3218619, 21900750.
-
(2011)
Cell Cycle
, vol.10
, Issue.18
, pp. 3086-3094
-
-
Wong, J.V.1
Dong, P.2
Nevins, J.R.3
Mathey-Prevot, B.4
You, L.5
-
36
-
-
77956417545
-
Human adenosine deaminase 2 induces differentiation of monocytes into macrophages and stimulates proliferation of T helper cells and macrophages
-
10.1189/jlb.1109764, 20453107
-
Zavialov AV, Gracia E, Glaichenhaus N, Franco R, Lauvau G. Human adenosine deaminase 2 induces differentiation of monocytes into macrophages and stimulates proliferation of T helper cells and macrophages. J Leukoc Biol 2010, 88(2):279-290. 10.1189/jlb.1109764, 20453107.
-
(2010)
J Leukoc Biol
, vol.88
, Issue.2
, pp. 279-290
-
-
Zavialov, A.V.1
Gracia, E.2
Glaichenhaus, N.3
Franco, R.4
Lauvau, G.5
-
37
-
-
84868301463
-
FGF signaling transforms non-neural ectoderm into neural crest
-
10.1016/j.ydbio.2012.09.006, 23000357
-
Yardley N, Garcia-Castro MI. FGF signaling transforms non-neural ectoderm into neural crest. Dev Biol 2012, 372:166-177. 10.1016/j.ydbio.2012.09.006, 23000357.
-
(2012)
Dev Biol
, vol.372
, pp. 166-177
-
-
Yardley, N.1
Garcia-Castro, M.I.2
-
38
-
-
84859736483
-
Desert hedgehog links transcription factor Sox10 to perineurial development
-
10.1523/JNEUROSCI.5759-11.2012, 22514309
-
Kuspert M, Weider M, Muller J, Hermans-Borgmeyer I, Meijer D, Wegner M. Desert hedgehog links transcription factor Sox10 to perineurial development. J Neurosci 2012, 32(16):5472-5480. 10.1523/JNEUROSCI.5759-11.2012, 22514309.
-
(2012)
J Neurosci
, vol.32
, Issue.16
, pp. 5472-5480
-
-
Kuspert, M.1
Weider, M.2
Muller, J.3
Hermans-Borgmeyer, I.4
Meijer, D.5
Wegner, M.6
-
39
-
-
78650632445
-
Retinoid X receptor gamma signaling accelerates CNS remyelination
-
10.1038/nn.2702, 21131950
-
Huang JK, Jarjour AA, Nait Oumesmar B, Kerninon C, Williams A, Krezel W, Kagechika H, Bauer J, Zhao C, Evercooren AB, et al. Retinoid X receptor gamma signaling accelerates CNS remyelination. Nat Neurosci 2011, 14(1):45-53. 10.1038/nn.2702, 21131950.
-
(2011)
Nat Neurosci
, vol.14
, Issue.1
, pp. 45-53
-
-
Huang, J.K.1
Jarjour, A.A.2
Nait Oumesmar, B.3
Kerninon, C.4
Williams, A.5
Krezel, W.6
Kagechika, H.7
Bauer, J.8
Zhao, C.9
Evercooren, A.B.10
-
40
-
-
79952282726
-
Replication of top markers of a genome-wide association study in multiple sclerosis in Spain
-
10.1038/gene.2010.52, 20944657
-
Cavanillas ML, Fernandez O, Comabella M, Alcina A, Fedetz M, Izquierdo G, Lucas M, Cenit MC, Arroyo R, Vandenbroeck K, et al. Replication of top markers of a genome-wide association study in multiple sclerosis in Spain. Genes Immun 2011, 12(2):110-115. 10.1038/gene.2010.52, 20944657.
-
(2011)
Genes Immun
, vol.12
, Issue.2
, pp. 110-115
-
-
Cavanillas, M.L.1
Fernandez, O.2
Comabella, M.3
Alcina, A.4
Fedetz, M.5
Izquierdo, G.6
Lucas, M.7
Cenit, M.C.8
Arroyo, R.9
Vandenbroeck, K.10
-
41
-
-
84856076500
-
The transcription factor Erg regulates expression of histone deacetylase 6 and multiple pathways involved in endothelial cell migration and angiogenesis
-
10.1182/blood-2011-04-350025, 22117042
-
Birdsey GM, Dryden NH, Shah AV, Hannah R, Hall MD, Haskard DO, Parsons M, Mason JC, Zvelebil M, Gottgens B, et al. The transcription factor Erg regulates expression of histone deacetylase 6 and multiple pathways involved in endothelial cell migration and angiogenesis. Blood 2012, 119(3):894-903. 10.1182/blood-2011-04-350025, 22117042.
-
(2012)
Blood
, vol.119
, Issue.3
, pp. 894-903
-
-
Birdsey, G.M.1
Dryden, N.H.2
Shah, A.V.3
Hannah, R.4
Hall, M.D.5
Haskard, D.O.6
Parsons, M.7
Mason, J.C.8
Zvelebil, M.9
Gottgens, B.10
-
42
-
-
33749423324
-
Redundant roles of Sox17 and Sox18 in postnatal angiogenesis in mice
-
Matsui T, Kanai-Azuma M, Hara K, Matoba S, Hiramatsu R, Kawakami H, Kurohmaru M, Koopman P, Kanai Y. Redundant roles of Sox17 and Sox18 in postnatal angiogenesis in mice. J Cell Sci 2006, 119(Pt 17):3513-3526.
-
(2006)
J Cell Sci
, vol.119
, Issue.PART 17
, pp. 3513-3526
-
-
Matsui, T.1
Kanai-Azuma, M.2
Hara, K.3
Matoba, S.4
Hiramatsu, R.5
Kawakami, H.6
Kurohmaru, M.7
Koopman, P.8
Kanai, Y.9
-
43
-
-
34250838603
-
Conditional Kif3a ablation causes abnormal hedgehog signaling topography, growth plate dysfunction, and excessive bone and cartilage formation during mouse skeletogenesis
-
10.1242/dev.001586, 2776720, 17507416
-
Koyama E, Young B, Nagayama M, Shibukawa Y, Enomoto-Iwamoto M, Iwamoto M, Maeda Y, Lanske B, Song B, Serra R, et al. Conditional Kif3a ablation causes abnormal hedgehog signaling topography, growth plate dysfunction, and excessive bone and cartilage formation during mouse skeletogenesis. Development 2007, 134(11):2159-2169. 10.1242/dev.001586, 2776720, 17507416.
-
(2007)
Development
, vol.134
, Issue.11
, pp. 2159-2169
-
-
Koyama, E.1
Young, B.2
Nagayama, M.3
Shibukawa, Y.4
Enomoto-Iwamoto, M.5
Iwamoto, M.6
Maeda, Y.7
Lanske, B.8
Song, B.9
Serra, R.10
-
44
-
-
84860201680
-
Indian Hedgehog signalling triggers Nkx3.2 protein degradation during chondrocyte maturation
-
10.1042/BJ20112062, 22507129
-
Choi SW, Jeong DU, Kim JA, Lee B, Joeng KS, Long F, Kim DW. Indian Hedgehog signalling triggers Nkx3.2 protein degradation during chondrocyte maturation. Biochem J 2012, 443(3):789-798. 10.1042/BJ20112062, 22507129.
-
(2012)
Biochem J
, vol.443
, Issue.3
, pp. 789-798
-
-
Choi, S.W.1
Jeong, D.U.2
Kim, J.A.3
Lee, B.4
Joeng, K.S.5
Long, F.6
Kim, D.W.7
-
45
-
-
83455220200
-
From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications
-
10.1182/blood-2011-07-356006, 3236116, 21998215
-
Hattangadi SM, Wong P, Zhang L, Flygare J, Lodish HF. From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications. Blood 2011, 118(24):6258-6268. 10.1182/blood-2011-07-356006, 3236116, 21998215.
-
(2011)
Blood
, vol.118
, Issue.24
, pp. 6258-6268
-
-
Hattangadi, S.M.1
Wong, P.2
Zhang, L.3
Flygare, J.4
Lodish, H.F.5
-
46
-
-
77956430960
-
Clinical microfluidics for neutrophil genomics and proteomics
-
10.1038/nm.2205, 3136804, 20802500
-
Kotz KT, Xiao W, Miller-Graziano C, Qian WJ, Russom A, Warner EA, Moldawer LL, De A, Bankey PE, Petritis BO, et al. Clinical microfluidics for neutrophil genomics and proteomics. Nat Med 2010, 16(9):1042-1047. 10.1038/nm.2205, 3136804, 20802500.
-
(2010)
Nat Med
, vol.16
, Issue.9
, pp. 1042-1047
-
-
Kotz, K.T.1
Xiao, W.2
Miller-Graziano, C.3
Qian, W.J.4
Russom, A.5
Warner, E.A.6
Moldawer, L.L.7
De, A.8
Bankey, P.E.9
Petritis, B.O.10
-
47
-
-
79953010469
-
E2f1-3 are critical for myeloid development
-
10.1074/jbc.M110.182733, 3039366, 21115501
-
Trikha P, Sharma N, Opavsky R, Reyes A, Pena C, Ostrowski MC, Roussel MF, Leone G. E2f1-3 are critical for myeloid development. J Biol Chem 2011, 286(6):4783-4795. 10.1074/jbc.M110.182733, 3039366, 21115501.
-
(2011)
J Biol Chem
, vol.286
, Issue.6
, pp. 4783-4795
-
-
Trikha, P.1
Sharma, N.2
Opavsky, R.3
Reyes, A.4
Pena, C.5
Ostrowski, M.C.6
Roussel, M.F.7
Leone, G.8
-
48
-
-
77349124883
-
Origin and development of dendritic cells
-
10.1111/j.0105-2896.2009.00879.x, 20193011
-
Liu K, Nussenzweig MC. Origin and development of dendritic cells. Immunol Rev 2010, 234(1):45-54. 10.1111/j.0105-2896.2009.00879.x, 20193011.
-
(2010)
Immunol Rev
, vol.234
, Issue.1
, pp. 45-54
-
-
Liu, K.1
Nussenzweig, M.C.2
-
49
-
-
81355143310
-
Cell-context dependent TCF/LEF expression and function: alternative tales of repression, de-repression and activation potentials
-
10.1615/CritRevEukarGeneExpr.v21.i3.10, 3434703, 22111711
-
Mao CD, Byers SW. Cell-context dependent TCF/LEF expression and function: alternative tales of repression, de-repression and activation potentials. Crit Rev Eukaryot Gene Expr 2011, 21(3):207-236. 10.1615/CritRevEukarGeneExpr.v21.i3.10, 3434703, 22111711.
-
(2011)
Crit Rev Eukaryot Gene Expr
, vol.21
, Issue.3
, pp. 207-236
-
-
Mao, C.D.1
Byers, S.W.2
-
50
-
-
84870736373
-
Spi-B is critical for plasmacytoid dendritic cell function and development
-
10.1182/blood-2012-06-436527, 23065153
-
Sasaki I, Hoshino K, Sugiyama T, Yamazaki C, Yano T, Iizuka A, Hemmi H, Tanaka T, Saito M, Sugiyama M, et al. Spi-B is critical for plasmacytoid dendritic cell function and development. Blood 2012, 120:4733-4743. 10.1182/blood-2012-06-436527, 23065153.
-
(2012)
Blood
, vol.120
, pp. 4733-4743
-
-
Sasaki, I.1
Hoshino, K.2
Sugiyama, T.3
Yamazaki, C.4
Yano, T.5
Iizuka, A.6
Hemmi, H.7
Tanaka, T.8
Saito, M.9
Sugiyama, M.10
-
51
-
-
18244384210
-
Multiple-laboratory comparison of microarray platforms
-
10.1038/nmeth756, 15846361
-
Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, et al. Multiple-laboratory comparison of microarray platforms. Nat Methods 2005, 2(5):345-350. 10.1038/nmeth756, 15846361.
-
(2005)
Nat Methods
, vol.2
, Issue.5
, pp. 345-350
-
-
Irizarry, R.A.1
Warren, D.2
Spencer, F.3
Kim, I.F.4
Biswal, S.5
Frank, B.C.6
Gabrielson, E.7
Garcia, J.G.8
Geoghegan, J.9
Germino, G.10
-
52
-
-
84861179768
-
" Guilt by association" is the exception rather than the rule in gene networks
-
10.1371/journal.pcbi.1002444, 3315453, 22479173
-
Gillis J, Pavlidis P. " Guilt by association" is the exception rather than the rule in gene networks. PLoS Comput Biol 2012, 8(3):e1002444. 10.1371/journal.pcbi.1002444, 3315453, 22479173.
-
(2012)
PLoS Comput Biol
, vol.8
, Issue.3
-
-
Gillis, J.1
Pavlidis, P.2
-
53
-
-
79951770197
-
P63 and p73 isoform expression in non-small cell lung cancer and corresponding morphological normal lung tissue
-
10.1097/JTO.0b013e31820b86b0, 21289519
-
Lo Iacono M, Monica V, Saviozzi S, Ceppi P, Bracco E, Papotti M, Scagliotti GV. p63 and p73 isoform expression in non-small cell lung cancer and corresponding morphological normal lung tissue. J Thorac Oncol 2011, 6(3):473-481. 10.1097/JTO.0b013e31820b86b0, 21289519.
-
(2011)
J Thorac Oncol
, vol.6
, Issue.3
, pp. 473-481
-
-
Lo Iacono, M.1
Monica, V.2
Saviozzi, S.3
Ceppi, P.4
Bracco, E.5
Papotti, M.6
Scagliotti, G.V.7
-
54
-
-
80355146399
-
Transcriptional regulation of macrophage polarization: enabling diversity with identity
-
10.1038/nri3088, 22025054
-
Lawrence T, Natoli G. Transcriptional regulation of macrophage polarization: enabling diversity with identity. Nat Rev Immunol 2011, 11(11):750-761. 10.1038/nri3088, 22025054.
-
(2011)
Nat Rev Immunol
, vol.11
, Issue.11
, pp. 750-761
-
-
Lawrence, T.1
Natoli, G.2
-
55
-
-
77953268611
-
Alternative activation of macrophages: mechanism and functions
-
10.1016/j.immuni.2010.05.007, 20510870
-
Gordon S, Martinez FO. Alternative activation of macrophages: mechanism and functions. Immunity 2010, 32(5):593-604. 10.1016/j.immuni.2010.05.007, 20510870.
-
(2010)
Immunity
, vol.32
, Issue.5
, pp. 593-604
-
-
Gordon, S.1
Martinez, F.O.2
-
56
-
-
33750813483
-
Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression
-
Martinez FO, Gordon S, Locati M, Mantovani A. Transcriptional profiling of the human monocyte-to-macrophage differentiation and polarization: new molecules and patterns of gene expression. J Immunol 2006, 177(10):7303-7311.
-
(2006)
J Immunol
, vol.177
, Issue.10
, pp. 7303-7311
-
-
Martinez, F.O.1
Gordon, S.2
Locati, M.3
Mantovani, A.4
-
57
-
-
84862777209
-
IFITM3 restricts the morbidity and mortality associated with influenza
-
10.1038/nature10921, 3648786, 22446628
-
Everitt AR, Clare S, Pertel T, John SP, Wash RS, Smith SE, Chin CR, Feeley EM, Sims JS, Adams DJ, et al. IFITM3 restricts the morbidity and mortality associated with influenza. Nature 2012, 484(7395):519-523. 10.1038/nature10921, 3648786, 22446628.
-
(2012)
Nature
, vol.484
, Issue.7395
, pp. 519-523
-
-
Everitt, A.R.1
Clare, S.2
Pertel, T.3
John, S.P.4
Wash, R.S.5
Smith, S.E.6
Chin, C.R.7
Feeley, E.M.8
Sims, J.S.9
Adams, D.J.10
-
58
-
-
84865447381
-
Plenary perspective: the complexity of constitutive and inducible gene expression in mononuclear phagocytes
-
10.1189/jlb.0312166, 3427611, 22773680
-
Hume DA. Plenary perspective: the complexity of constitutive and inducible gene expression in mononuclear phagocytes. J Leukoc Biol 2012, 92(3):433-444. 10.1189/jlb.0312166, 3427611, 22773680.
-
(2012)
J Leukoc Biol
, vol.92
, Issue.3
, pp. 433-444
-
-
Hume, D.A.1
-
59
-
-
84859993180
-
Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages
-
10.1073/pnas.1110156109, 3341041, 22451944
-
Schroder K, Irvine KM, Taylor MS, Bokil NJ, Le Cao KA, Masterman KA, Labzin LI, Semple CA, Kapetanovic R, Fairbairn L, et al. Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages. Proc Natl Acad Sci USA 2012, 109(16):E944-E953. 10.1073/pnas.1110156109, 3341041, 22451944.
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, Issue.16
-
-
Schroder, K.1
Irvine, K.M.2
Taylor, M.S.3
Bokil, N.J.4
Le Cao, K.A.5
Masterman, K.A.6
Labzin, L.I.7
Semple, C.A.8
Kapetanovic, R.9
Fairbairn, L.10
-
60
-
-
24644519490
-
The transcriptional landscape of the mammalian genome
-
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, et al. The transcriptional landscape of the mammalian genome. Science 2005, 309(5740):1559-1563.
-
(2005)
Science
, vol.309
, Issue.5740
, pp. 1559-1563
-
-
Carninci, P.1
Kasukawa, T.2
Katayama, S.3
Gough, J.4
Frith, M.C.5
Maeda, N.6
Oyama, R.7
Ravasi, T.8
Lenhard, B.9
Wells, C.10
-
61
-
-
33744805985
-
Genome-wide analysis of mammalian promoter architecture and evolution
-
10.1038/ng1789, 16645617
-
Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, Ponjavic J, Semple CA, Taylor MS, Engstrom PG, Frith MC, et al. Genome-wide analysis of mammalian promoter architecture and evolution. Nat Genet 2006, 38(6):626-635. 10.1038/ng1789, 16645617.
-
(2006)
Nat Genet
, vol.38
, Issue.6
, pp. 626-635
-
-
Carninci, P.1
Sandelin, A.2
Lenhard, B.3
Katayama, S.4
Shimokawa, K.5
Ponjavic, J.6
Semple, C.A.7
Taylor, M.S.8
Engstrom, P.G.9
Frith, M.C.10
-
62
-
-
84867740805
-
Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages
-
10.1038/ni.2419, 23023392
-
Gautier EL, Shay T, Miller J, Greter M, Jakubzick C, Ivanov S, Helft J, Chow A, Elpek KG, Gordonov S, et al. Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages. Nat Immunol 2012, 13(11):1118-1128. 10.1038/ni.2419, 23023392.
-
(2012)
Nat Immunol
, vol.13
, Issue.11
, pp. 1118-1128
-
-
Gautier, E.L.1
Shay, T.2
Miller, J.3
Greter, M.4
Jakubzick, C.5
Ivanov, S.6
Helft, J.7
Chow, A.8
Elpek, K.G.9
Gordonov, S.10
-
63
-
-
84865418665
-
Deciphering the transcriptional network of the dendritic cell lineage
-
10.1038/ni.2370, 22797772
-
Miller JC, Brown BD, Shay T, Gautier EL, Jojic V, Cohain A, Pandey G, Leboeuf M, Elpek KG, Helft J, et al. Deciphering the transcriptional network of the dendritic cell lineage. Nat Immunol 2012, 13(9):888-899. 10.1038/ni.2370, 22797772.
-
(2012)
Nat Immunol
, vol.13
, Issue.9
, pp. 888-899
-
-
Miller, J.C.1
Brown, B.D.2
Shay, T.3
Gautier, E.L.4
Jojic, V.5
Cohain, A.6
Pandey, G.7
Leboeuf, M.8
Elpek, K.G.9
Helft, J.10
-
64
-
-
84874038349
-
There are no markers that distinguish dendritic cells from macrophages
-
Hume DA, Mabbott NA, Raza S, Freeman TC. There are no markers that distinguish dendritic cells from macrophages. Nature Immunol 2013, 14:187-189.
-
(2013)
Nature Immunol
, vol.14
, pp. 187-189
-
-
Hume, D.A.1
Mabbott, N.A.2
Raza, S.3
Freeman, T.C.4
|