Simple-sequence repeat markers of Cattleya coccinea (Orchidaceae), an endangered species of the Brazilian Atlantic forest

Genetics and Molecular Research

Volumn 12, Issue 3, 2013, Pages 3274-3278

  Novello, M ^a   Rodrigues, J F ^a   Pinheiro, F ^b   Oliveira, G C X ^a   Veasey, E A ^a   Koehler, S ^c  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b Pós graduação em Biodiversidade Vegetal e Meio Ambiente   (Brazil)

^c FEDERAL UNIVERSITY OF SÃO PAULO   (Brazil)

Author keywords

Cattleya; Epidendroideae; Laeliinae; Microsatellite markers; Orchidaceae; Sophronitis

Indexed keywords

GENOMIC DNA;

ARTICLE; BRASILIORCHIS GRACILIS; CATTLEYA COCCINEA; DNA MODIFICATION; ELECTROPHORESIS; ENDANGERED SPECIES; EPIDENDRUM SECUNDUM; GENE AMPLIFICATION; GENE LOCUS; GENETIC CONSERVATION; GENETIC VARIABILITY; MICROSATELLITE MARKER; NONHUMAN; NUCLEOTIDE SEQUENCE; ORCHIDACEAE; PLANT GENETICS; POLYMERASE CHAIN REACTION; POPULATION DYNAMICS; POPULATION STRUCTURE; PROTEIN PURIFICATION; SIMPLE SEQUENCE REPEAT;

ALLELES; BRAZIL; ENDANGERED SPECIES; GENETIC MARKERS; GENETIC VARIATION; MICROSATELLITE REPEATS; ORCHIDACEAE; POLYMORPHISM, GENETIC; TREES;

EID: 84884244162     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2013.September.3.3     Document Type: Article

References (10)

1. Barros F, Vinhos F, Rodrigues VT, Barberena FVA, et al (2012). Orchidaceae in Lista de Espécies da Flora do Brasil, Jardim Botânico do Rio de Janeiro. Available at [http://floradobrasil.jbrj.gov.br/2012/FB000179]. Accessed May 18, 2012.
2. Billote N, Lagoda PJL, Risterucci AM and Baurens FC (1999). Microsatellite-enriched libraries: applied methodology for the development of SSR markers in tropical crops. Fruits 54: 277-288.
3. Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.
4. Fowlie JA (1987). A contribution to a monographic revision of the genus Sophronitis Lindl. Orchid Digest. 51: 15-32.
5. Lewis PO and Zaykin D (2001). Genetic Data Analysis: Computer Program for Theanalysis of Allelic Data. Available at [htpp://hydrodictyon.eeb.uconn.edu/people/plewis/software.php]. Accessed April 10, 2012
6. Martins WS, Lucas DC, Neves KF and Bertioli DJ (2009). WebSata web software for microsatellite marker development. Bioinformation 3: 282-283.
7. Morellato LPC and Haddad CFB (2000). Introduction: the brazilian atlantic forest. Biotropica 32: 786-792.
8. Rozen S and Skaletsky HJ (2000). Primer 3: Bioinformatics Methods and Protocols. In: Methods in Molecular Biology (Krawatz S and Misener S, eds.) Available at [http://frodo.wi.mit.edu/cgibin/primer3/primer3_www.cgi]. Accessed February 15, 2011 Human Press, New Jersey, 365-386.
9. Schuelke M (2000). An economic method for the fluorescent labeling of PCR fragments. Nat. Biotechnol. 18: 233-234
10. WCSP (2012). World Checklist of Monocotyledons. Facilitated by the Royal Botanic Gardens. Kew. Available at [http://apps.kew.org/wcsp/wcsp/]. Accessed April 7, 2012.