Estimation of 3D geometry of microtubules using multi-angle total internal reflection fluorescence microscopy

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 6362 LNCS, Issue PART 2, 2010, Pages 538-545

  Yang, Qian ^a   Karpikov, Alexander ^b   Toomre, Derek ^c   Duncan, James ^a,b  

^a Yale University   (United States)

^b YALE UNIVERSITY   (United States)

^c YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

3D GEOMETRY; 3D POSITIONS; AXIAL RESOLUTIONS; BIOLOGICAL PARAMETER; BIOLOGICAL SAMPLES; GEOMETRIC SMOOTHNESS; INCIDENT ANGLES; MICROTUBULES; MULTI-ANGLE; PENETRATION DEPTH; PRIOR INFORMATION; SIMULATED PHANTOM; TIRF MICROSCOPY; TOTAL INTERNAL REFLECTION FLUORESCENCE MICROSCOPY;

FLUORESCENCE; FLUORESCENCE MICROSCOPY; MEDICAL COMPUTING; MEDICAL IMAGING; REFRACTIVE INDEX;

THREE DIMENSIONAL;

ALGORITHM; ANIMAL; ARTICLE; AUTOMATED PATTERN RECOGNITION; COMPUTER ASSISTED DIAGNOSIS; FLUORESCENCE MICROSCOPY; HUMAN; IMAGE ENHANCEMENT; METHODOLOGY; MICROTUBULE; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; THREE DIMENSIONAL IMAGING; ULTRASTRUCTURE;

ALGORITHMS; ANIMALS; HUMANS; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MICROSCOPY, FLUORESCENCE; MICROTUBULES; PATTERN RECOGNITION, AUTOMATED; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY;

EID: 84883845371     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-15745-5_66     Document Type: Conference Paper

References (9)

1. Truskey, G.A., Burmeister, J.S., Grapa, E., Reichert,W.M.: Total internal reflection fluorescence microscopy (tirfm) ii. topographic mapping of relative cell/substrate separation distances. Journal of Cell Science 103, 491-499 (1992)
2. Ölveczky, B.P., Periasamy, N., Verkman, A.S.: Mapping fluorophore distributions in three dimensions by quantitative multiple angle-total internal reflection fluorescence microscopy. Biophysics Journal 73, 2836-2847 (1997) (Pubitemid 27471492)
3. Rohrbach, A.: Observing secretory granules with a multiangle evanescent wave microscopy. Biophysical Journal 78, 2641-2654 (2000)
4. Stock, K., Sailer, R., Strauss, W.S.L., Lyttek, M., Steiner, R., Schneckenburger, H.: Variable-angle total internal reflection fluorescence microscopy(va-tirfm): realization and application of a compact illumination device. Journal of Microscopy 211, 19-29 (2003) (Pubitemid 41709848)
5. Axelrod, D., Hellen, E.H., Fulbright, R.M.: Total internal reflection fluorescence. Topics in fluorescence spectroscopy: Principles and applications 3, 289-343 (1992)
6. Mattheyses, A.L., Axelrod, D.: Direct measurement of the evanescent field profile produced by objective-based total internal reflection fluorescence. Journal of Biomedical Optics 11(1) (2006)
7. Cohen, L.D., Kimmel, R.: Global minium for active contour models: A minimum path approach. International Journal of Computer Vision 24(1), 57-78 (1997)
8. Bicek, A.D., Tüzel, E., Demtchouk, A., Uppalapati, M., Hancock, W.O., Kroll, D.M., Odde, D.J.: Anterograde microtubule transport drives microtubule bending in llc-pk1 epithelial cells. Molecular Biology of the Cell 20, 2943-2953 (2009)
9. Kass, M., Witkin, A., Terzopoulos, D.: Snakes: Active contour models. In: International Journal of Computer Vision, 321-331 (1988)