Phaeobacter leonis sp. nov., an alphaproteobacterium from Mediterranean Sea sediments

International Journal of Systematic and Evolutionary Microbiology

Volumn 63, Issue PART9, 2013, Pages 3301-3306

  Gaboyer, Frédéric ^a   Tindall, Brian J ^b   Ciobanu, Maria Cristina ^a   Duthoit, Frédérique ^a   Le Romancer, Marc ^a   Alain, Karine ^a  

^a Centre National de la Recherche Scientifique   (France)

^b LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMINOLIPID; BACTERIAL DNA; CARDIOLIPIN; FATTY ACID; LIPID; PHOSPHATIDYLCHOLINE; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; QUINONE DERIVATIVE; RNA 16S; UNCLASSIFIED DRUG;

ALPHAPROTEOBACTERIA; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BIOCHEMISTRY; CELL PH; CHEMOTAXONOMY; DNA DNA HYBRIDIZATION; GENE SEQUENCE; INCUBATION TEMPERATURE; MEDITERRANEAN SEA; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHAEOBACTER ARTICUS; PHAEOBACTER LEONIS; PHYLOGENETIC TREE; PHYSIOLOGY; PRIORITY JOURNAL; SEA SURFACE WATERS; SEDIMENT;

BASE COMPOSITION; DNA, BACTERIAL; FATTY ACIDS; HETEROTROPHIC PROCESSES; MEDITERRANEAN SEA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; RHODOBACTERACEAE; RNA, RIBOSOMAL, 16S; SEAWATER; SEQUENCE ANALYSIS, DNA; UBIQUINONE; WATER MICROBIOLOGY;

EID: 84883784311     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.046128-0     Document Type: Article

References (18)

1. Alain, K., Querellou, J., Lesongeur, F., Pignet, P., Crassous, P., Raguénès, G., Cueff, V. & Cambon-Bonavita, M.-A. (2002). Caminibacter hydrogeniphilus gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent. Int J Syst Evol Microbiol 52, 1317-1323.
2. Bligh, E. G. & Dyer, W. J. (1959). A rapid method of total lipid extraction and purification. Can J Biochem Physiol 37, 911-917.
3. Ciobanu, M.-C., Rabineau, M., Droz, L., Révillon, S., Ghiglione, J.-F., Dennielou, B., Jorry, S.-J., Kallmeyer, J., Etoubleau, J. & other authors (2012). Sedimentological imprint on subseafloor microbial communities in Western Mediterranean Sea Quaternary sediments. Biogeosciences 9, 3491-3512.
4. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
5. DeLong, E. F. (1992). Archaea in coastal marine environments. Proc Natl Acad Sci U S A 89, 5685-5689.
6. Gerhardt, P., Murray, R., Wood, W. & Krieg, N. (1994). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology Press.
7. Huss, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
8. Kuykendall, L., Roy, M., O'neill, J. & Devine, T. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
9. Martens, T., Heidorn, T., Pukall, R., Simon, M., Tindall, B. J. & Brinkhoff, T. (2006). Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1999 as Marinovum algicola gen. nov., comb. nov., and emended descriptions of the genera Roseobacter, Ruegeria and Leisingera. Int J Syst Evol Microbiol 56, 1293-1304.
10. Mesbah, M., Premachandran, U. & Whitman, W. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
11. Ruiz-Ponte, C., Cilia, V., Lambert, C. & Nicolas, J. L. (1998). Roseobacter gallaeciensis sp. nov., a new marine bacterium isolated from rearings and collectors of the scallop Pecten maximus. Int J Syst Bacteriol 48, 537-542.
12. Stackebrandt, E. & Ebers, J. (2006). Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 33, 152-155.
13. Tindall, B. (1990a). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13, 128-130.
14. Tindall, B. (1990b). Lipid composition of Halobacterium lacusprofundi. FEMS Microbiol Lett 66, 199-202.
15. Tindall, B., Sikorski, J., Smibert, R. A. & Krieg, N. R. (2007). Phenotypic Characterization and the Principles of Comparative Systematics. In Methods for General and Molecular Microbiology. 3rd edition. pp. 330-393. Edited by C. A. Reddy, T. J. Beveridge, J. A. Breznak, G. Marzluf, T. M. Schmidt & L. R. Snyder. Washington DC: American Society for Microbiology.
16. Vandecandelaere, I., Segaert, E., Mollica, A., Faimali, M. & Vandamme, P. (2009). Phaeobacter caeruleus sp. nov., a bluecoloured, colony-forming bacterium isolated from a marine electroactive biofilm. Int J Syst Evol Microbiol 59, 1209-1214.
17. Yoon, J.-H., Kang, S.-J., Lee, S.-Y. & Oh, T.-K. (2007). Phaeobacter daeponensis sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 57, 856-861.
18. Zhang, D.-C., Li, H.-R., Xin, Y. H., Liu, H.-C., Chi, Z.-M., Zhou, P.-J. & Yu, Y. (2008). Phaeobacter arcticus sp. nov., a psychrophilic bacterium isolated from the Arctic. Int J Syst Evol Microbiol 58, 1384-1387.