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Volumn 77, Issue 1-2, 2013, Pages 8-21

Characteristics of MHC class i genes in house sparrows passer domesticus as revealed by long cDNA transcripts and amplicon sequencing

Author keywords

Amplicon 454 sequencing; cDNA; House sparrow; Linkage; MHC class I

Indexed keywords

AVES; GALLIFORMES; GALLUS GALLUS; PASSER; PASSER DOMESTICUS; PASSERI; PASSERIFORMES;

EID: 84883777816     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-013-9575-y     Document Type: Article
Times cited : (21)

References (66)
  • 1
    • 70350548427 scopus 로고    scopus 로고
    • MHC class i genes of birds of prey: Isolation, polymorphism and diversifying selection
    • 10.1007/s10592-008-9653-7 1:CAS:528:DC%2BD1MXht1GisLnP
    • Alcaide M, Edwards SV, Cadahía L, Negro JJ (2009) MHC class I genes of birds of prey: isolation, polymorphism and diversifying selection. Conserv Genet 10:1349-1355
    • (2009) Conserv Genet , vol.10 , pp. 1349-1355
    • Alcaide, M.1    Edwards, S.V.2    Cadahía, L.3    Negro, J.J.4
  • 2
    • 65249087333 scopus 로고    scopus 로고
    • New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system
    • 10.1111/j.1755-0998.2009.02622.x 21564729 10.1111/j.1755-0998.2009.02622. x 1:CAS:528:DC%2BD1MXls1Ggtbw%3D
    • Babik W, Taberlet P, Ejsmond MJ, Radwan J (2009) New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system. Mol Ecol Resour 9:713-719. doi: 10.1111/j.1755-0998.2009.02622.x
    • (2009) Mol Ecol Resour , vol.9 , pp. 713-719
    • Babik, W.1    Taberlet, P.2    Ejsmond, M.J.3    Radwan, J.4
  • 4
    • 0023187442 scopus 로고
    • The foreign antigen binding site and T cell recognition regions of class i histocompatibility antigens
    • 2443855 10.1038/329512a0 1:CAS:528:DyaL2sXmtlCguro%3D
    • Bjorkman PJ, Saper MA, Samraoui B, Bennett WS, Strominger JL, Wiley DC (1987) The foreign antigen binding site and T cell recognition regions of class I histocompatibility antigens. Nature 329:512-518
    • (1987) Nature , vol.329 , pp. 512-518
    • Bjorkman, P.J.1    Saper, M.A.2    Samraoui, B.3    Bennett, W.S.4    Strominger, J.L.5    Wiley, D.C.6
  • 5
    • 77953858387 scopus 로고    scopus 로고
    • Extensive MHC class II B gene duplication in a Passerine, the Common Yellowthroat (Geothlypis trichas)
    • 20200139 10.1093/jhered/esq018 1:CAS:528:DC%2BC3cXnvVOls7c%3D
    • Bollmer JL, Dunn PO, Whittingham LA, Wimpee C (2010) Extensive MHC class II B gene duplication in a Passerine, the Common Yellowthroat (Geothlypis trichas). J Hered 101:448-460
    • (2010) J Hered , vol.101 , pp. 448-460
    • Bollmer, J.L.1    Dunn, P.O.2    Whittingham, L.A.3    Wimpee, C.4
  • 6
    • 2342504658 scopus 로고    scopus 로고
    • Diversity of Mhc class i and IIB genes in house sparrows (Passer domesticus)
    • 14963619 10.1007/s00251-004-0648-3 1:CAS:528:DC%2BD2cXisV2isLk%3D
    • Bonneaud C, Sorci G, Morin V, Westerdahl H, Zoorob R, Wittzell H (2004) Diversity of Mhc class I and IIB genes in house sparrows (Passer domesticus). Immunogenetics 55:855-865
    • (2004) Immunogenetics , vol.55 , pp. 855-865
    • Bonneaud, C.1    Sorci, G.2    Morin, V.3    Westerdahl, H.4    Zoorob, R.5    Wittzell, H.6
  • 7
    • 84872608867 scopus 로고    scopus 로고
    • Variation in MHC genotypes in two populations of house sparrow (Passer domesticus) with different population histories
    • 10.1002/ece3.13 22393491 10.1002/ece3.13
    • Borg AA, Pedersen SA, Jensen H, Westerdahl H (2011) Variation in MHC genotypes in two populations of house sparrow (Passer domesticus) with different population histories. Ecol Evol 1(2):145-159. doi: 10.1002/ece3.13
    • (2011) Ecol Evol , vol.1 , Issue.2 , pp. 145-159
    • Borg, A.A.1    Pedersen, S.A.2    Jensen, H.3    Westerdahl, H.4
  • 8
    • 1542269177 scopus 로고    scopus 로고
    • MHC polymorphism under host-pathogen coevolution
    • 14722687 10.1007/s00251-003-0630-5 1:CAS:528:DC%2BD2cXhsFeqt74%3D
    • Borghans JAM, Beltman JB, De Boer RJ (2004) MHC polymorphism under host-pathogen coevolution. Immunogenetics 55:732-739
    • (2004) Immunogenetics , vol.55 , pp. 732-739
    • Borghans, J.A.M.1    Beltman, J.B.2    De Boer, R.J.3
  • 9
    • 28944453190 scopus 로고    scopus 로고
    • Evolution by recombination and transspecies polymorphism in the MHC class i gene of Xenopus laevis
    • 16162865 10.1093/molbev/msj016 1:CAS:528:DC%2BD2MXhtleqtLjK
    • Bos DH, Waldman B (2006) Evolution by recombination and transspecies polymorphism in the MHC class I gene of Xenopus laevis. Mol Biol Evol 23:137-143
    • (2006) Mol Biol Evol , vol.23 , pp. 137-143
    • Bos, D.H.1    Waldman, B.2
  • 10
    • 77957224454 scopus 로고    scopus 로고
    • Adaptive divergence of ancient gene duplicates in the avian MHC class II beta
    • 20463048 10.1093/molbev/msq120 1:CAS:528:DC%2BC3cXht1WhtL7E
    • Burri R, Salamin N, Studer RA, Roulin A, Fumagalli L (2010) Adaptive divergence of ancient gene duplicates in the avian MHC class II beta. Mol Biol Evol 27:2360-2374
    • (2010) Mol Biol Evol , vol.27 , pp. 2360-2374
    • Burri, R.1    Salamin, N.2    Studer, R.A.3    Roulin, A.4    Fumagalli, L.5
  • 11
    • 77958601227 scopus 로고    scopus 로고
    • The influence of sex and body size on nestling survival and recruitment in the house sparrow
    • 10.1111/j.1095-8312.2010.01515.x
    • Cleasby IR, Nakagawa S, Gillespie DOS, Burke T (2010) The influence of sex and body size on nestling survival and recruitment in the house sparrow. Biol J Linn Soc 101:680-688
    • (2010) Biol J Linn Soc , vol.101 , pp. 680-688
    • Cleasby, I.R.1    Nakagawa, S.2    Gillespie, D.O.S.3    Burke, T.4
  • 12
    • 69249222669 scopus 로고    scopus 로고
    • Architecture and organization of chicken microchromosome 16: Order of the NOR, MHC-Y, and MHC-B Subregions
    • 10.1093/jhered/esp044 1:CAS:528:DC%2BD1MXhtVGrsbnF
    • Delany ME, Robinson CM, Goto RM, Miller MM (2009) Architecture and organization of chicken microchromosome 16: order of the NOR, MHC-Y, and MHC-B Subregions. Heredity 100:507-514
    • (2009) Heredity , vol.100 , pp. 507-514
    • Delany, M.E.1    Robinson, C.M.2    Goto, R.M.3    Miller, M.M.4
  • 13
    • 77957233168 scopus 로고    scopus 로고
    • Datamonkey 2010 a suite of phylogenetic analysis tools for evolutionary biology
    • 10.1093/bioinformatics/btq429 20671151 10.1093/bioinformatics/btq429 1:CAS:528:DC%2BC3cXht1Whtb7F
    • Delport W, Poon AF, Frost SDW, Kosakovsky Pond SL (2010) Datamonkey 2010 a suite of phylogenetic analysis tools for evolutionary biology. Bioinformatics 26(19):2455-2457. doi: 10.1093/bioinformatics/btq429
    • (2010) Bioinformatics , vol.26 , Issue.19 , pp. 2455-2457
    • Delport, W.1    Poon, A.F.2    Frost, S.D.W.3    Kosakovsky Pond, S.L.4
  • 14
    • 0016842119 scopus 로고
    • Enhanced immunological surveillance in mice heterozygous at the H-2 gene complex
    • 1079575 10.1038/256050a0 1:STN:280:DyaE2M7nsFarug%3D%3D
    • Doherty PC, Zinkernagel RM (1975) Enhanced immunological surveillance in mice heterozygous at the H-2 gene complex. Nature 256:50-52
    • (1975) Nature , vol.256 , pp. 50-52
    • Doherty, P.C.1    Zinkernagel, R.M.2
  • 15
    • 79952201554 scopus 로고    scopus 로고
    • Evolutionary analysis and expression profiling of zebra finch immune genes
    • 10.1093/gbe/evq061 20884724 10.1093/gbe/evq061
    • Ekblom R, French L, Slate J, Burke Terry (2010) Evolutionary analysis and expression profiling of zebra finch immune genes. Genome Biol Evol 2:781-790. doi: 10.1093/gbe/evq061
    • (2010) Genome Biol Evol , vol.2 , pp. 781-790
    • Ekblom, R.1    French, L.2    Slate, J.3    Burke, T.4
  • 16
    • 79961029463 scopus 로고    scopus 로고
    • Genetic mapping of the major histocompatibility complex in the zebra finch (Taeniopygia guttata)
    • 21494955 10.1007/s00251-011-0525-9 1:CAS:528:DC%2BC3MXoslWgtbY%3D
    • Ekblom R, Stapley J, Ball AD, Birkhead T, Burke T, Slate J (2011) Genetic mapping of the major histocompatibility complex in the zebra finch (Taeniopygia guttata). Immunogenetics 63:523-530
    • (2011) Immunogenetics , vol.63 , pp. 523-530
    • Ekblom, R.1    Stapley, J.2    Ball, A.D.3    Birkhead, T.4    Burke, T.5    Slate, J.6
  • 17
    • 84876501581 scopus 로고    scopus 로고
    • In silico peptide-binding predictions of passerine MHC class i reveal similarities across distantly related species, suggesting convergence on the level of protein function
    • 10.1007/s00251-012-0676-3 23358931 10.1007/s00251-012-0676-3 1:CAS:528:DC%2BC3sXksVyls70%3D
    • Follin E, Karlsson M, Lundegaard C, Nielsen M, Wallin S, Paulsson K, Westerdahl H (2013) In silico peptide-binding predictions of passerine MHC class I reveal similarities across distantly related species, suggesting convergence on the level of protein function. Immunogenetics 65:299-311. doi: 10.1007/s00251-012-0676-3
    • (2013) Immunogenetics , vol.65 , pp. 299-311
    • Follin, E.1    Karlsson, M.2    Lundegaard, C.3    Nielsen, M.4    Wallin, S.5    Paulsson, K.6    Westerdahl, H.7
  • 18
    • 0036017142 scopus 로고    scopus 로고
    • Variation at the major histocompatibility complex in Savannah sparrows
    • 12030987 10.1046/j.1365-294X.2002.01508.x 1:CAS:528:DC%2BD38Xls1ars78%3D
    • Freeman-Gallant CR, Johnson EM, Saponara F, Stanger M (2002) Variation at the major histocompatibility complex in Savannah sparrows. Mol Ecol 11:1125-1130
    • (2002) Mol Ecol , vol.11 , pp. 1125-1130
    • Freeman-Gallant, C.R.1    Johnson, E.M.2    Saponara, F.3    Stanger, M.4
  • 19
    • 77951973196 scopus 로고    scopus 로고
    • A 454 multiplex sequencing method for rapid and reliable genotyping of highly variable genes
    • 10.1186/1471-2164-11-296
    • Galan M, Guivier E, Caraux G, Charbonnel N, Cosson JF (2010) A 454 multiplex sequencing method for rapid and reliable genotyping of highly variable genes. BMC Genom 2010(11):296
    • (2010) BMC Genom , vol.2010 , Issue.11 , pp. 296
    • Galan, M.1    Guivier, E.2    Caraux, G.3    Charbonnel, N.4    Cosson, J.F.5
  • 20
    • 51349106520 scopus 로고    scopus 로고
    • Characterization of a nonclassical class i MHC gene in a reptile, the Galapagos Marine Iguana (Amblyrhynchus cristatus)
    • 10.1371/journal.pone.0002859 18682845 10.1371/journal.pone.0002859
    • Glaberman S, Du Pasquier L, Caccone A (2008) Characterization of a nonclassical class I MHC gene in a reptile, the Galapagos Marine Iguana (Amblyrhynchus cristatus). PLoS ONE 3(8):e2859. doi: 10.1371/journal.pone. 0002859
    • (2008) PLoS ONE , vol.3 , Issue.8 , pp. 2859
    • Glaberman, S.1    Du Pasquier, L.2    Caccone, A.3
  • 21
    • 79251574130 scopus 로고    scopus 로고
    • Remarkable conservation of distinct nonclassical MHC class i lineages in divergent amphibian species
    • 10.4049/jimmunol.1001467 21115732 10.4049/jimmunol.1001467 1:CAS:528:DC%2BC3cXhs1ajtLrF
    • Goyos A, Sowa J, Ohta Y, Robert J (2011) Remarkable conservation of distinct nonclassical MHC class I lineages in divergent amphibian species. J Immunol 186:372-381. doi: 10.4049/jimmunol.1001467
    • (2011) J Immunol , vol.186 , pp. 372-381
    • Goyos, A.1    Sowa, J.2    Ohta, Y.3    Robert, J.4
  • 22
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT
    • 1:CAS:528:DC%2BD3cXhtVyjs7Y%3D
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucl Acid Symp Ser 41:95-98
    • (1999) Nucl Acid Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 23
    • 0028028910 scopus 로고
    • Evolutionary genetics of the major histocompatibility complex
    • 10.1086/285643
    • Hedrick PW (1994) Evolutionary genetics of the major histocompatibility complex. Am Nat 143:945-964
    • (1994) Am Nat , vol.143 , pp. 945-964
    • Hedrick, P.W.1
  • 24
    • 0036807185 scopus 로고    scopus 로고
    • Pathogen resistance and genetic variation at MHC loci
    • 12449477
    • Hedrick PW (2002) Pathogen resistance and genetic variation at MHC loci. Evolution 56:1902-1908
    • (2002) Evolution , vol.56 , pp. 1902-1908
    • Hedrick, P.W.1
  • 25
    • 0034126368 scopus 로고    scopus 로고
    • MHC class II pseudogene and genomic signature of a 32-kb cosmid in the house finch (Carpodacus mexicanus)
    • 10810083 10.1101/gr.10.5.613 1:CAS:528:DC%2BD3cXjsFegtL0%3D
    • Hess CM, Gasper J, Hoekstra HE, Hill CE, Edwards SV (2000) MHC class II pseudogene and genomic signature of a 32-kb cosmid in the house finch (Carpodacus mexicanus). Genome Res 10:613-623
    • (2000) Genome Res , vol.10 , pp. 613-623
    • Hess, C.M.1    Gasper, J.2    Hoekstra, H.E.3    Hill, C.E.4    Edwards, S.V.5
  • 26
    • 33846581044 scopus 로고    scopus 로고
    • The major histocompatibility complex (Mhc) class IIB region has greater genomic structural flexibility and diversity in the quail than the chicken
    • 10.1186/1471-2164-7-322 10.1186/1471-2164-7-322
    • Hosomichi K, Shiina T, Suzuki S, Tanaka M, Shimizu S, Iwamoto S, Hara H, Yoshida Y, Kulski J, Inoko H, Hanzawa K (2006) The major histocompatibility complex (Mhc) class IIB region has greater genomic structural flexibility and diversity in the quail than the chicken. BMC Genom 7:322. doi: 10.1186/1471-2164-7-322
    • (2006) BMC Genom , vol.7 , pp. 322
    • Hosomichi, K.1    Shiina, T.2    Suzuki, S.3    Tanaka, M.4    Shimizu, S.5    Iwamoto, S.6    Hara, H.7    Yoshida, Y.8    Kulski, J.9    Inoko, H.10    Hanzawa, K.11
  • 28
    • 0023764283 scopus 로고
    • Patterns of nucleotide substitution at major histocompatibility complex class i loci reveals overdominant selection
    • 3412472 10.1038/335167a0 1:CAS:528:DyaL1cXlvVCktrY%3D
    • Hughes AL, Nei M (1988) Patterns of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection. Nature 335:167-170
    • (1988) Nature , vol.335 , pp. 167-170
    • Hughes, A.L.1    Nei, M.2
  • 29
    • 0032426345 scopus 로고    scopus 로고
    • Natural selection at major histocompatibility complex loci of vertebrates
    • 9928486 10.1146/annurev.genet.32.1.415 1:CAS:528:DyaK1MXjvFWltQ%3D%3D
    • Hughes AL, Yeager M (1998) Natural selection at major histocompatibility complex loci of vertebrates. Annu Rev Genet 32:415-435
    • (1998) Annu Rev Genet , vol.32 , pp. 415-435
    • Hughes, A.L.1    Yeager, M.2
  • 30
    • 43049126454 scopus 로고    scopus 로고
    • Support for the minimal essential MHC hypothesis: A parrot with a single, highly polymorphic MHC class II B gene
    • 18431567 10.1007/s00251-008-0287-1 1:CAS:528:DC%2BD1cXlt1Crtb8%3D
    • Hughes CR, Miles S, Walbroehl JM (2008) Support for the minimal essential MHC hypothesis: a parrot with a single, highly polymorphic MHC class II B gene. Immunogenetics 60:219-231
    • (2008) Immunogenetics , vol.60 , pp. 219-231
    • Hughes, C.R.1    Miles, S.2    Walbroehl, J.M.3
  • 31
    • 0028702002 scopus 로고
    • Evolutionary conservation of MHC class i and class II molecules - Different yet the same
    • 7654997 10.1006/smim.1994.1050 1:CAS:528:DyaK2MXltlagtbg%3D
    • Kaufman J, Salomonsen J, Flajnik M (1994) Evolutionary conservation of MHC class I and class II molecules - different yet the same. Semin Immunol 6:411-424
    • (1994) Semin Immunol , vol.6 , pp. 411-424
    • Kaufman, J.1    Salomonsen, J.2    Flajnik, M.3
  • 32
    • 0028987604 scopus 로고
    • A "minimal essential Mhc" and an "unrecognized Mhc": Two extremes in selection for polymorphism
    • 7558083 10.1111/j.1600-065X.1995.tb00670.x 1:CAS:528:DyaK2MXlsVCntLY%3D
    • Kaufman J, Volk H, Wallny HJ (1995) A "minimal essential Mhc" and an "unrecognized Mhc": two extremes in selection for polymorphism. Immunol Rev 143:63-88
    • (1995) Immunol Rev , vol.143 , pp. 63-88
    • Kaufman, J.1    Volk, H.2    Wallny, H.J.3
  • 33
    • 0033613425 scopus 로고    scopus 로고
    • The chicken B locus is a minimal essential major histocompatibility complex
    • 10553909 10.1038/44856 1:CAS:528:DyaK1MXntFyksrg%3D
    • Kaufman J, Milne S, Gobel TW, Walker BA, Jacob JP, Auffray C, Zoorob R, Beck S (1999) The chicken B locus is a minimal essential major histocompatibility complex. Nature 401:923-925
    • (1999) Nature , vol.401 , pp. 923-925
    • Kaufman, J.1    Milne, S.2    Gobel, T.W.3    Walker, B.A.4    Jacob, J.P.5    Auffray, C.6    Zoorob, R.7    Beck, S.8
  • 35
    • 17744395033 scopus 로고    scopus 로고
    • Datamonkey: Rapid detection of selective pressure on individual sites of codon alignments
    • 10.1093/bioinformatics/bti320
    • Koskakovsky Pond SL, Frost SDW (2005) Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21(10):2531-2533
    • (2005) Bioinformatics , vol.21 , Issue.10 , pp. 2531-2533
    • Koskakovsky Pond, S.L.1    Frost, S.D.W.2
  • 36
    • 0029924137 scopus 로고    scopus 로고
    • Assignment of Rfp-Y to the chicken major histocompatibility complex/NOR microchromosome and evidence for high-frequency recombination associated with the nucleolar organizer region
    • 8632997 10.1073/pnas.93.9.3958 1:CAS:528:DyaK28XivVKrtLg%3D
    • Miller MM, Goto RM, Taylor RL Jr, Zoorob R, Auffray C, Briles RW, Briles WE, Bloom SE (1996) Assignment of Rfp-Y to the chicken major histocompatibility complex/NOR microchromosome and evidence for high-frequency recombination associated with the nucleolar organizer region. Proc Natl Acad Sci USA 93:3958-3962
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 3958-3962
    • Miller, M.M.1    Goto, R.M.2    Taylor, Jr.R.L.3    Zoorob, R.4    Auffray, C.5    Briles, R.W.6    Briles, W.E.7    Bloom, S.E.8
  • 38
    • 40349095031 scopus 로고    scopus 로고
    • The mask of seniority? A neglected age indicator in house sparrows Passer domesticus
    • 10.1111/j.2008.0908-8857.04171.x
    • Nakagawa S, Burke T (2008) The mask of seniority? A neglected age indicator in house sparrows Passer domesticus. Avian Biol 39:222-225
    • (2008) Avian Biol , vol.39 , pp. 222-225
    • Nakagawa, S.1    Burke, T.2
  • 39
    • 58149240032 scopus 로고    scopus 로고
    • Differential selection according to the degree of cheating in a status signal
    • 18700196 10.1098/rsbl.2008.0349
    • Nakagawa S, Lee JW, Woodward BK, Hatchwell BJ, Burke T (2008) Differential selection according to the degree of cheating in a status signal. Biol Lett 4:667-669
    • (2008) Biol Lett , vol.4 , pp. 667-669
    • Nakagawa, S.1    Lee, J.W.2    Woodward, B.K.3    Hatchwell, B.J.4    Burke, T.5
  • 40
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • 3444411 1:CAS:528:DyaL28Xmt1aisbs%3D
    • Nei M, Gojobori T (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3:418-426
    • (1986) Mol Biol Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 41
    • 64949197224 scopus 로고    scopus 로고
    • Extrapair paternity in an insular population of house sparrows after the experimental introduction of individuals from the mainland
    • 10.1093/beheco/arp006
    • Ockendon N, Griffith SC, Burke T (2009) Extrapair paternity in an insular population of house sparrows after the experimental introduction of individuals from the mainland. Behav Ecol 20:305-312
    • (2009) Behav Ecol , vol.20 , pp. 305-312
    • Ockendon, N.1    Griffith, S.C.2    Burke, T.3
  • 42
    • 0001155314 scopus 로고
    • Evolution of diversity at the major histocompatibility complex
    • 21232350 10.1016/0169-5347(90)90207-T 1:STN:280:DC%2BC3M7hsVagtw%3D%3D
    • Potts WK, Wakeland EK (1990) Evolution of diversity at the major histocompatibility complex. Trends Ecol Evol 5:181-187
    • (1990) Trends Ecol Evol , vol.5 , pp. 181-187
    • Potts, W.K.1    Wakeland, E.K.2
  • 43
    • 67349255313 scopus 로고    scopus 로고
    • Extremely high MHC class i variation in a population of a long-distance migrant, the Scarlet Rosefinch (Carpodacus erythrinus)
    • 19452149 10.1007/s00251-009-0375-x 1:CAS:528:DC%2BD1MXmvFGhs7k%3D
    • Promerova M, Albrecht T, Bryja J (2009) Extremely high MHC class I variation in a population of a long-distance migrant, the Scarlet Rosefinch (Carpodacus erythrinus). Immunogenetics 61:451-461
    • (2009) Immunogenetics , vol.61 , pp. 451-461
    • Promerova, M.1    Albrecht, T.2    Bryja, J.3
  • 44
    • 80054767609 scopus 로고    scopus 로고
    • Defining the Turkey MHC: Identification of expressed class I- and class IIB-like genes independent of the MHC-B
    • 21710346 10.1007/s00251-011-0549-1 1:CAS:528:DC%2BC3MXht12iurjJ
    • Reed KM, Bauer MM, Monson MS, Benoit B, Chaves LD, O'Hare TH, Delany ME (2011) Defining the Turkey MHC: identification of expressed class I- and class IIB-like genes independent of the MHC-B. Immunogenetics 63:753-771
    • (2011) Immunogenetics , vol.63 , pp. 753-771
    • Reed, K.M.1    Bauer, M.M.2    Monson, M.S.3    Benoit, B.4    Chaves, L.D.5    O'Hare, T.H.6    Delany, M.E.7
  • 45
    • 20644439105 scopus 로고    scopus 로고
    • MHC class IB molecules bridge innate and acquired immunity
    • 15928678 10.1038/nri1635 1:CAS:528:DC%2BD2MXks1GmsLY%3D
    • Rodgers JR, Cook RG (2005) MHC class IB molecules bridge innate and acquired immunity. Nat Rev Immunol 5:459-471
    • (2005) Nat Rev Immunol , vol.5 , pp. 459-471
    • Rodgers, J.R.1    Cook, R.G.2
  • 49
    • 83555178428 scopus 로고    scopus 로고
    • Maternal effects and heritability of annual productivity
    • 22082138 10.1111/j.1420-9101.2011.02412.x
    • Schroeder J, Burke T, Owens I, Nakagawa S (2012) Maternal effects and heritability of annual productivity. J Evol Biol 25:149-156
    • (2012) J Evol Biol , vol.25 , pp. 149-156
    • Schroeder, J.1    Burke, T.2    Owens, I.3    Nakagawa, S.4
  • 50
    • 79961032489 scopus 로고    scopus 로고
    • Characterization of MHC-I in the blue tit (Cyanistes caeruleus) reveals low levels of genetic diversity and trans-population evolution across European populations
    • 21559782 10.1007/s00251-011-0532-x
    • Schut E, Aguilar JR, Merino S, Magrath MJ, Komdeur J, Westerdahl H (2011) Characterization of MHC-I in the blue tit (Cyanistes caeruleus) reveals low levels of genetic diversity and trans-population evolution across European populations. Immunogenetics 63:531-542
    • (2011) Immunogenetics , vol.63 , pp. 531-542
    • Schut, E.1    Aguilar, J.R.2    Merino, S.3    Magrath, M.J.4    Komdeur, J.5    Westerdahl, H.6
  • 51
    • 84860901198 scopus 로고    scopus 로고
    • Characterization and 454 pyrosequencing of Major Histocompatibility Complex class i genes in the great tit reveal complexity in a passerine system
    • 10.1186/1471-2148-12-68 22587557 10.1186/1471-2148-12-68 1:CAS:528:DC%2BC3sXmvFKgsg%3D%3D
    • Sepil I, Moghadam HK, Huchard E, Sheldon BC (2012) Characterization and 454 pyrosequencing of Major Histocompatibility Complex class I genes in the great tit reveal complexity in a passerine system. BMC Evol Biol 12:68. doi: 10.1186/1471-2148-12-68
    • (2012) BMC Evol Biol , vol.12 , pp. 68
    • Sepil, I.1    Moghadam, H.K.2    Huchard, E.3    Sheldon, B.C.4
  • 52
    • 0028199663 scopus 로고
    • Antigen presentation by major histocompatibility class I-B molecules
    • 8011299 10.1146/annurev.iy.12.040194.004203 1:CAS:528:DyaK2cXivFKisr0%3D
    • Shawar S, Vayas J, Rodgers J, Rich R (1994) Antigen presentation by major histocompatibility class I-B molecules. Annu Rev Immunol 12:839-880
    • (1994) Annu Rev Immunol , vol.12 , pp. 839-880
    • Shawar, S.1    Vayas, J.2    Rodgers, J.3    Rich, R.4
  • 55
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML Web servers
    • 18853362 10.1080/10635150802429642
    • Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 57:758-771
    • (2008) Syst Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 56
    • 34548699489 scopus 로고    scopus 로고
    • The Mhc class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and y genes with variable diversity and expression
    • 17653538 10.1007/s00251-007-0234-6 1:CAS:528:DC%2BD2sXhtVCnsrjN
    • Strand T, Westerdahl H, Hoeglund J, Alatalo RV, Siitari H (2007) The Mhc class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and Y genes with variable diversity and expression. Immunogenetics 59:725-734
    • (2007) Immunogenetics , vol.59 , pp. 725-734
    • Strand, T.1    Westerdahl, H.2    Hoeglund, J.3    Alatalo, R.V.4    Siitari, H.5
  • 57
    • 80155164025 scopus 로고    scopus 로고
    • Characterization of MHC class i and II genes in a subantarctic seabird, the Blue Petrel, Halobaena caerulea (Procellariiformes)
    • 10.1007/s00251-011-0534-8 21607694 10.1007/s00251-011-0534-8 1:CAS:528:DC%2BC3MXhtFKntb%2FF
    • Strandh M, Lannefors M, Bonadonna F, Westerdahl H (2011) Characterization of MHC class I and II genes in a subantarctic seabird, the Blue Petrel, Halobaena caerulea (Procellariiformes). Immunogenetics 63:653-666. doi: 10.1007/s00251-011-0534-8
    • (2011) Immunogenetics , vol.63 , pp. 653-666
    • Strandh, M.1    Lannefors, M.2    Bonadonna, F.3    Westerdahl, H.4
  • 58
    • 79959281269 scopus 로고    scopus 로고
    • JMHC: Software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing
    • 10.1111/j.1755-0998.2011.02997.x 21676201 10.1111/j.1755-0998.2011.02997. x 1:CAS:528:DC%2BC3MXpvVGrsb8%3D
    • Stuglik MT, Radwan J, Babik W (2011) jMHC: software assistant for multilocus genotyping of gene families using next-generation amplicon sequencing. Mol Ecol Resour 11(4):739-742. doi: 10.1111/j.1755-0998.2011.02997.x
    • (2011) Mol Ecol Resour , vol.11 , Issue.4 , pp. 739-742
    • Stuglik, M.T.1    Radwan, J.2    Babik, W.3
  • 59
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • doi: 10.1093/molbev/msr121
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739. doi: 10.1093/molbev/msr121. http://www.kumarlab.net/publications
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 60
    • 36949025933 scopus 로고    scopus 로고
    • Passerine MHC: Genetic variation and disease resistance in the wild
    • 10.1007/s10336-007-0230-5
    • Westerdahl H (2007) Passerine MHC: genetic variation and disease resistance in the wild. J Ornithol 148:S469-S477
    • (2007) J Ornithol , vol.148
    • Westerdahl, H.1
  • 61
    • 0032924822 scopus 로고    scopus 로고
    • Polymorphism and transcription of Mhc class i genes in a passerine bird, the great reed warbler
    • 9914330 10.1007/s002510050477 1:CAS:528:DyaK1MXjvFahtw%3D%3D
    • Westerdahl H, Wittzell H, von Schantz T (1999) Polymorphism and transcription of Mhc class I genes in a passerine bird, the great reed warbler. Immunogenetics 49:158-170
    • (1999) Immunogenetics , vol.49 , pp. 158-170
    • Westerdahl, H.1    Wittzell, H.2    Von Schantz, T.3
  • 62
    • 3042698704 scopus 로고    scopus 로고
    • MHC class i typing in a songbird with numerous loci and high polymorphism using motif-specific PCR and DGGE
    • 15162116 10.1038/sj.hdy.6800450 1:CAS:528:DC%2BD2cXkt1Ggtrs%3D
    • Westerdahl H, Wittzell H, von Schantz T, Bensch S (2004) MHC class I typing in a songbird with numerous loci and high polymorphism using motif-specific PCR and DGGE. Heredity 92:534-542
    • (2004) Heredity , vol.92 , pp. 534-542
    • Westerdahl, H.1    Wittzell, H.2    Von Schantz, T.3    Bensch, S.4
  • 64
    • 0032933802 scopus 로고    scopus 로고
    • Concerted evolution of two Mhc class II B loci in pheasants and domestic chickens
    • 10331274 10.1093/oxfordjournals.molbev.a026130 1:CAS:528: DyaK1MXislShsrg%3D
    • Wittzell H, Bernot A, Auffray C, Zoorob R (1999) Concerted evolution of two Mhc class II B loci in pheasants and domestic chickens. Mol Biol Evol 16:479-490
    • (1999) Mol Biol Evol , vol.16 , pp. 479-490
    • Wittzell, H.1    Bernot, A.2    Auffray, C.3    Zoorob, R.4
  • 65
    • 84883794229 scopus 로고    scopus 로고
    • Trans-species polymorphism vs independent evolution of class II MHC sequence motifs
    • 10.1016/0198-8859(96)85384-5
    • Yeager M, Hughes AL (1996) Trans-species polymorphism vs independent evolution of class II MHC sequence motifs. Hum Immunol 47:O689
    • (1996) Hum Immunol , vol.47 , pp. 689
    • Yeager, M.1    Hughes, A.L.2
  • 66
    • 78650653530 scopus 로고    scopus 로고
    • 454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher
    • 10.1186/1471-2148-10-395 21194449 10.1186/1471-2148-10-395 1:CAS:528:DC%2BC3MXntFWgtg%3D%3D
    • Zagalska-Neubauer M, Babik W, Stuglik M, Gustafsson L, Cichon M, Radwan J (2010) 454 sequencing reveals extreme complexity of the class II Major Histocompatibility Complex in the collared flycatcher. BMC Evol Biol 10:395. doi: 10.1186/1471-2148-10-395
    • (2010) BMC Evol Biol , vol.10 , pp. 395
    • Zagalska-Neubauer, M.1    Babik, W.2    Stuglik, M.3    Gustafsson, L.4    Cichon, M.5    Radwan, J.6


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