Molecular evidence and high genetic diversity of shrew-borne Seewis virus in Slovenia

Virus Research

Volumn 177, Issue 1, 2013, Pages 113-117

  Resman, Katarina ^a   Korva, Miša ^a   Fajs, Luka ^a   Zidarič, Tanja ^a   Trilar, Tomi ^b   Županc, Tatjana Avšič ^a  

^a UNIVERSITY OF LJUBLJANA   (Slovenia)

^b SVNn Museum of Natural History   (Slovenia)

Author keywords

Hantavirus; Seewis virus; Slovenia; Sorex araneus

Indexed keywords

NUCLEOTIDE;

ARTICLE; CLADISTICS; GENE SEQUENCE; GENETIC VARIABILITY; HANTAVIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEEWIS VIRUS; SHREW; SLOVENIA; VIRUS STRAIN;

HANTAVIRUS; RODENTIA; SOREX ARANEUS;

HANTAVIRUS; SEEWIS VIRUS; SLOVENIA; SOREX ARANEUS;

ANIMALS; DISEASE RESERVOIRS; GENETIC VARIATION; HANTAVIRUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; SHREWS; SLOVENIA; VIRAL PROTEINS;

EID: 84883755635     PISSN: 01681702     EISSN: 18727492     Source Type: Journal    
DOI: 10.1016/j.virusres.2013.07.011     Document Type: Article

References (23)

1. Arai S., Bennett S.N., Sumibcay L., Cook J.A., Song J.W., Hope A., Parmenter C., Nerurkar V.R., Yates T.L., Yanagihara R. Phylogenetically distinct hantaviruses in the masked shrew (Sorex cinereus) and dusky shrew (Sorex monticolus) in the United States. The American Journal of Tropical Medicine and Hygiene 2008, 78(2):348-351.
2. Arai S., Song J.W., Sumibcay L., Bennett S.N., Nerurkar V.R., Parmenter C., Cook J.A., Yates T.L., Yanagihara R. Hantavirus in northern short-tailed shrew, United States. Emerging Infectious Diseases 2007, 13(9):1420-1423.
3. Avsic-Zupanc T., Nemirov K., Petrovec M., Trilar T., Poljak M., Vaheri A., Plyusnin A. Genetic analysis of wild-type Dobrava hantavirus in Slovenia: co-existence of two distinct genetic lineages within the same natural focus. Journal of General Virology 2000, 81(Pt. 7):1747-1755.
4. Avsic-Zupanc T., Petrovec M., Duh D., Plyusnina A., Lundkvist A., Plyusnin A. Puumala hantavirus in Slovenia: analyses of S and M segment sequences recovered from patients and rodents. Virus Research 2007, 123(2):204-210.
5. Avsic-Zupanc T., Xiao S.Y., Stojanovic R., Gligic A., van der Groen G., LeDuc J.W. Characterization of Dobrava virus: a Hantavirus from Slovenia, Yugoslavia. Journal of Medical Virology 1992, 38(2):132-137.
6. Carey D.E., Reuben R., Panicker K.N., Shope R.E., Myers R.M. Thottapalayam virus: a presumptive arbovirus isolated from a shrew in India. Indian Journal of Medical Research 1971, 59(11):1758-1760.
7. Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 2007, 7:214.
8. Gu S.H., Markowski J., Kang H.J., Hejduk J., Sikorska B., Liberski P.P., Yanagihara R. Boginia virus, a newfound hantavirus harbored by the Eurasian water shrew (Neomys fodiens) in Poland. Virology Journal 2013, 10:160.
9. Kang H.J., Arai S., Hope A.G., Cook J.A., Yanagihara R. Novel hantavirus in the flat-skulled shrew (Sorex roboratus). Vector Borne and Zoonotic Diseases 2010, 10(6):593-597.
10. Kang H.J., Arai S., Hope A.G., Song J.W., Cook J.A., Yanagihara R. Genetic diversity and phylogeography of Seewis virus in the Eurasian common shrew in Finland and Hungary. Virology Journal 2009, 6:208.
11. Kang H.J., Bennett S.N., Sumibcay L., Arai S., Hope A.G., Mocz G., Song J.W., Cook J.A., Yanagihara R. Evolutionary insights from a genetically divergent hantavirus harbored by the European common mole (Talpa europaea). PLoS ONE 2009, 4(7):e6149.
12. Kang H.J., Kadjo B., Dubey S., Jacquet F., Yanagihara R. Molecular evolution of Azagny virus, a newfound hantavirus harbored by the West African pygmy shrew (Crocidura obscurior) in Cote d'Ivoire. Virology Journal 2011, 8:373.
13. Klempa B., Fichet-Calvet E., Lecompte E., Auste B., Aniskin V., Meisel H., Barriere P., Koivogui L., ter Meulen J., Kruger D.H. Novel hantavirus sequences in Shrew, Guinea. Emerging Infectious Diseases 2007, 13(3):520-522.
14. Klempa B., Fichet-Calvet E., Lecompte E., Auste B., Aniskin V., Meisel H., Denys C., Koivogui L., ter Meulen J., Kruger D.H. Hantavirus in African wood mouse, Guinea. Emerging Infectious Diseases 2006, 12(5):838-840.
15. Korva M., Duh D., Puterle A., Trilar T., Avsic-Zupanc T. First molecular evidence of Tula hantavirus in Microtus voles in Slovenia. Virus Research 2009.
16. Schlegel M., Radosa L., Rosenfeld U.M., Schmidt S., Triebenbacher C., Lohr P.W., Fuchs D., Heroldova M., Janova E., Stanko M., Mosansky L., Fricova J., Pejcoch M., Suchomel J., Purchart L., Groschup M.H., Kruger D.H., Klempa B., Ulrich R.G. Broad geographical distribution and high genetic diversity of shrew-borne Seewis hantavirus in Central Europe. Virus Genes 2012, 45(1):48-55.
17. Song J.W., Baek L.J., Schmaljohn C.S., Yanagihara R. Thottapalayam virus, a prototype shrewborne hantavirus. Emerging Infectious Diseases 2007, 13(7):980-985.
18. Song J.W., Gu S.H., Bennett S.N., Arai S., Puorger M., Hilbe M., Yanagihara R. Seewis virus, a genetically distinct hantavirus in the Eurasian common shrew (Sorex araneus). Virology Journal 2007, 4:114.
19. Song J.W., Kang H.J., Gu S.H., Moon S.S., Bennett S.N., Song K.J., Baek L.J., Kim H.C., O'Guinn M.L., Chong S.T., Klein T.A., Yanagihara R. Characterization of Imjin virus, a newly isolated hantavirus from the Ussuri white-toothed shrew (Crocidura lasiura). Journal of Virology 2009, 83(12):6184-6191.
20. Song J.W., Kang H.J., Song K.J., Truong T.T., Bennett S.N., Arai S., Truong N.U., Yanagihara R. Newfound hantavirus in Chinese mole shrew, Vietnam. Emerging Infectious Diseases 2007, 13(11):1784-1787.
21. Sumibcay L., Kadjo B., Gu S.H., Kang H.J., Lim B.K., Cook J.A., Song J.W., Yanagihara R. Divergent lineage of a novel hantavirus in the banana pipistrelle (Neoromicia nanus) in Cote d'Ivoire. Virology Journal 2012, 9:34.
22. Weiss S., Witkowski P.T., Auste B., Nowak K., Weber N., Fahr J., Mombouli J.V., Wolfe N.D., Drexler J.F., Drosten C., Klempa B., Leendertz F.H., Kruger D.H. Hantavirus in bat, Sierra Leone. Emerging Infectious Diseases 2012, 18(1):159-161.
23. Yashina L.N., Abramov S.A., Gutorov V.V., Dupal T.A., Krivopalov A.V., Panov V.V., Danchinova G.A., Vinogradov V.V., Luchnikova E.M., Hay J., Kang H.J., Yanagihara R. Seewis virus: phylogeography of a shrew-borne hantavirus in Siberia, Russia. Vector Borne and Zoonotic Diseases 2010, 10(6):585-591.