메뉴 건너뛰기




Volumn 2013, Issue 9, 2013, Pages 355-362

SBEToolbox: A Matlab toolbox for biological network analysis

Author keywords

Biological network; Matlab toolbox; Network evolution; Node centrality

Indexed keywords

ALGORITHM; ARTICLE; BIOINFORMATICS; COMPUTER INTERFACE; COMPUTER NETWORK; COMPUTER PROGRAM; DATA ANALYSIS SOFTWARE; EVOLUTIONARY ALGORITHM; MATHEMATICAL COMPUTING; NETWORK EVOLUTION; VALIDATION PROCESS;

EID: 84883638325     PISSN: None     EISSN: 11769343     Source Type: Journal    
DOI: 10.4137/EBO.S12012     Document Type: Article
Times cited : (39)

References (17)
  • 1
    • 73249122026 scopus 로고    scopus 로고
    • [webpage on the Internet]. David Gleich; Available from: Accessed 2008
    • Gleich D. MatlabBGL-A Matlab Graph Library [webpage on the Internet]. David Gleich; 2008. Available from: http://dgleich.github.com/matlab-bgl/. Accessed 2008.
    • (2008) MatlabBGL-A Matlab Graph Library
    • Gleich, D.1
  • 2
    • 0242490780 scopus 로고    scopus 로고
    • Cytoscape: A software environment for integrated models of biomolecular interaction networks
    • Shannon P, Markiel A, Ozier O, etal. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003;13(11):2498-504.
    • (2003) Genome Res. , vol.13 , Issue.11 , pp. 2498-2504
    • Shannon, P.1    Markiel, A.2    Ozier, O.3
  • 5
    • 26944456272 scopus 로고    scopus 로고
    • Network clustering coefficient without degree-correlation biases
    • Soffer SN, Vázquez A. Network clustering coefficient without degree-correlation biases. Phys Rev E Stat Nonlin Soft Matter Phys. 2005;71(5 Pt 2):057101.
    • (2005) Phys Rev E Stat Nonlin Soft Matter Phys. , vol.71 , Issue.5 PART 2 , pp. 057101
    • Soffer, S.N.1    Vázquez, A.2
  • 7
    • 66249092826 scopus 로고    scopus 로고
    • Information flow analysis of interactome networks
    • Missiuro PV, Liu K, Zou L, etal. Information flow analysis of interactome networks. PLoS Comput Biol. 2009;5(4):e1000350.
    • (2009) PLoS Comput Biol. , vol.5 , Issue.4
    • Missiuro, P.V.1    Liu, K.2    Zou, L.3
  • 8
    • 0037012880 scopus 로고    scopus 로고
    • Specificity and stability in topology of protein networks
    • Maslov S, Sneppen K. Specificity and stability in topology of protein networks. Science. 2002;296(5569):910-3.
    • (2002) Science. , vol.296 , Issue.5569 , pp. 910-913
    • Maslov, S.1    Sneppen, K.2
  • 9
    • 14644396645 scopus 로고    scopus 로고
    • Functional cartography of complex metabolic networks
    • Guimerà R, Nunes Amaral LA. Functional cartography of complex metabolic networks. Nature. 2005;433(7028):895-900.
    • (2005) Nature. , vol.433 , Issue.7028 , pp. 895-900
    • Guimerà, R.1    Nunes Amaral, L.A.2
  • 11
    • 2942552459 scopus 로고    scopus 로고
    • An automated method for finding molecular complexes in large protein interaction networks
    • Bader GD, Hogue CW. An automated method for finding molecular complexes in large protein interaction networks. BMC Bioinformatics. 2003;4:2.
    • (2003) BMC Bioinformatics. , vol.4 , pp. 2
    • Bader, G.D.1    Hogue, C.W.2
  • 12
    • 84860361165 scopus 로고    scopus 로고
    • Detecting overlapping protein complexes in protein-protein interaction networks
    • Nepusz T, Yu H, Paccanaro A. Detecting overlapping protein complexes in protein-protein interaction networks. Nat Methods. 2012;9(5):471-2.
    • (2012) Nat Methods. , vol.9 , Issue.5 , pp. 471-472
    • Nepusz, T.1    Yu, H.2    Paccanaro, A.3
  • 13
    • 0005924596 scopus 로고    scopus 로고
    • [dissertation]. Utrecht, The Netherlands: University of Utrecht
    • Van Dongen S. Graph Clustering by Flow Simulation [dissertation]. Utrecht, The Netherlands: University of Utrecht; 2000.
    • (2000) Graph Clustering by Flow Simulation
    • van Dongen, S.1
  • 14
    • 80054991442 scopus 로고    scopus 로고
    • Functional Genomics Assistant (FUGA): A toolbox for the analysis of complex biological networks
    • Drozdov I, Ouzounis CA, Shah AM, Tsoka S. Functional Genomics Assistant (FUGA): a toolbox for the analysis of complex biological networks. BMC Res Notes. 2011;4:462.
    • (2011) BMC Res Notes. , vol.4 , pp. 462
    • Drozdov, I.1    Ouzounis, C.A.2    Shah, A.M.3    Tsoka, S.4
  • 15
    • 77954385460 scopus 로고    scopus 로고
    • Complex network measures of brain connectivity: Uses and interpretations
    • Rubinov M, Sporns O. Complex network measures of brain connectivity: uses and interpretations. Neuroimage. 2010;52:1059-69.
    • (2010) Neuroimage. , vol.52 , pp. 1059-1069
    • Rubinov, M.1    Sporns, O.2
  • 16
    • 64349094767 scopus 로고    scopus 로고
    • Tissue specificity and the human protein interaction network
    • Bossi A, Lehner B. Tissue specificity and the human protein interaction network. Mol Syst Biol. 2009;5:260.
    • (2009) Mol Syst Biol. , vol.5 , pp. 260
    • Bossi, A.1    Lehner, B.2
  • 17
    • 0035805255 scopus 로고    scopus 로고
    • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
    • Ideker T, Thorsson V, Ranish JA, etal. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science. 2001;292:929-34.
    • (2001) Science. , vol.292 , pp. 929-934
    • Ideker, T.1    Thorsson, V.2    Ranish, J.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.