The stoichiometry and energetics of oxygenic phototrophic growth

Photosynthesis Research

Volumn 116, Issue 1, 2013, Pages 55-78

  Minkevich, Igor G ^a   Fursova, Polina V ^b   Tjorlova, Lada D ^b   Tsygankov, Anatoly A ^c   Riznichenko, Galina Yu ^b  

^a SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

^b MOSCOW STATE UNIVERSITY   (Russian Federation)

^c INSTITUTE OF BASIC BIOLOGICAL PROBLEMS   (Russian Federation)

Author keywords

Biomass quantum yield; Cell bioenergetics; Electron transport chain; High energy bonds; Photosystems; Reductivity

Indexed keywords

OXYGEN;

ARTICLE; BIOLOGICAL MODEL; BIOMASS; DRUG EFFECT; ELECTRON TRANSPORT; ENERGY METABOLISM; KINETICS; PHOTOTROPHY;

BIOMASS; ELECTRON TRANSPORT; ENERGY METABOLISM; KINETICS; MODELS, BIOLOGICAL; OXYGEN; PHOTOTROPHIC PROCESSES;

EID: 84883446603     PISSN: 01668595     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11120-013-9896-0     Document Type: Article

References (56)

1. Aiba S (1982) Growth kinetics of photosynthetic microorganisms. Adv Biochem Eng 23:85-156
2. Aiba S, Humphrey AE, Millis NF (1973) Biochemical engineering, 2nd edn. University of Tokyo Press, Tokyo
3. Andrews TJ, Whitney SM (2005) Manipulating ribulose bisphosphate carboxylase/oxygenase in the chloroplasts of higher plants. In: Collings AF, Critchley C (eds) Artificial photosynthesis from basic biology to industrial application. Wiley-VCH, Weinheim, pp 243-261
4. Buchanan BB, Gruissem W, Jones RL (2000) Biochemistry and molecular biology of plants. American Society of Plant Physiologists, Rockville
5. Chisti Y (2007) Biodiesel from microalgae. Biotechnol Adv 25(3):294-306
6. Demirbas A (2009) Production of biodiesel from algae oils. Energy Sources Part A 31(2):163-168
7. Elston T, Wang H, Oster G (1998) Energy transduction in ATP synthase. Nature 391:510-513
8. Erickson LE, Kuvshinnikov VD, Minkevich IG, Eroshin VK (1978a) Comparison of yield coefficients estimated from measurements of nitrogen, organic substrate, biomass and oxygen during yeast growth. J Ferment Technol 56(5):524-531
9. Erickson LE, Minkevich IG, Eroshin VK (1978b) Application of mass and energy balance regularities in fermentation. Biotechnol Bioeng 20(10):1595-1621
10. Erickson LE, Minkevich IG, Eroshin VK (1979) Utilization of mass-energy balance regularities in the analysis of continuous culture data. Biotechnol Bioeng 21(4):575-591
11. 3 species. Planta 149(1):78-90
12. Fouchard S, Pruvost J, Degrenne B, Titica M, Legrand J (2009) Kinetic modeling of light limitation and sulfur deprivation effects in the induction of hydrogen production with Chlamydomonas reinhardtii: Part I. Model development and parameter identification. Biotechnol Bioeng 102(1):232-245
13. Govindjee (1982) Photosynthesis. Academic Press, New York
14. 2-emission mitigation systems: a review. Biotechnol Adv 29(2):189-198
15. Hoekema S, Douma RD, Janssen M, Tramper J, Wijffels RH (2006) Controlling light-use by Rhodobacter capsulatus continuous cultures in a flat-panel photobioreactor. Biotechnol Bioeng 95(4):613-626
16. Iwai M, Takizawa K, Tokutsu R, Okamuro A, Takahashi Y, Minagawa J (2010) Isolation of the elusive supercomplex that drives cyclic electron flow in photosynthesis. Nature 464(7292):1210-1213
17. Johnson GN (2011) Physiology of PSI cyclic electron transport in higher plants. Biochim Biophys Acta 1807(8):906-911
18. Katritzky AR, Kuanar M, Slavov S, Hall CD, Karelson M, Kahn I, Dobchev DA (2010) Quantitative correlation of physical and chemical properties with chemical structure: utility for prediction. Chem Rev 110(10):5714-5789
19. Kharasch MS (1929) Heats of combustion of organic compounds. Bureau Stand J Res 2(2):359-430
20. Kharasch MS, Sher B (1925) The electronic conception of valence and heats of combustion of organic compounds. J Phys Chem 29:625-658
21. Kondepudi D, Prigogine I (1999) Modern thermodynamics from heat engines to dissipative structures. Wiley, Chichester
22. Kroon BMA, Thoms S (2006) From electron to biomass: a mechanistic model to describe phytoplankton photosynthesis and steady-state growth rates. J Physiol 42:593-609
23. Kuhn HJ, Cometta S, Fiechter A (1980) Effects of growth temperature on maximal specific growth rate, yield, maintenance, and death rate in glucise-limited continuous culture of the thermophilic Bacillus caldotenax. Eur J Appl Microbiol Biotechnol 10(4):303-315
24. Laisk A, Nedbal L, Govindjee (2009) Photosynthesis in silico: understanding Complexity from Molecules to Ecosystems. Advances in Photosynthesis and Respiration, vol 29. Springer, Dordrecht
25. Lee HY, Erickson LE (1987) Theoretical and experimental yields for photoautotrophic, mixotrophic, and photoheterotrophic bacteria. Biotechnol Bioeng 29:476-481
26. Mayberry WR, Prochazka GJ, Payne WJ (1967) Growth yields of bacteria on selected organic compounds. Appl Microbiol 15(6):1332-1338
27. Mayberry WR, Prochazka GJ, Payne WJ (1968) Factors derived from studies of aerobic growth in minimal media. J Bacteriol 95(4):1424-1426
28. Minkevich IG (1980) Physico-chemical foundations of mass-energy balance of cellular metabolism. In: Eroshin VK, Minkevich IG, Golovleva LA, Uarova VN (eds) Limitation and inhibition of microbiological processes. Scientific Center of Biological Research in Pushchino, Pushchino, pp 55-91 (in Russian)
29. Minkevich IG (1982) Physico-chemical properties of organic compounds and the energetics of metabolism. J Theor Biol 95(3):569-590
30. Minkevich IG (1983) Mass-energy balance for microbial product synthesis - biochemical and cultural aspects. Biotechnol Bioeng 25(5):1267-1293
31. Minkevich IG (1985) Estimation of available efficiency of microbial growth on methanol and ethanol. Biotechnol Bioeng 27:792-799
32. Minkevich IG (2005) Mass-energy balance and kinetics of the growth of microorganisms. Regular and Chaotic Dynamics, Moscow-Izhevsk (in Russian)
33. Minkevich IG, Eroshin VK (1973) Productivity and heat generation of fermentation under oxygen limitation. Folia Microbiol 18(5):376-385
34. Minkevich IG, Eroshin VK, Alekseeva TA, Tereshchenko FP (1977) Elementary composition and the energy content of microbial biomass. Mikrobiologicheskaya Promyshlennost 2(144):1-4
35. Minkevich IG, Andreyev SV, Eroshin VK (2000) The effect of two inhibiting substrates on growth kinetics and cell maintenance of the yeast Candida valida. Process Biochem 36:209-217
36. Minkevich IG, Laurinavichene TV, Tsygankov AA (2004) Theoretical and experimental quantum efficiencies of the growth of anoxigenic phototrophic bacteria. Process Biochem 39(8):939-949
37. Minkevich IG, Dedyukhina EG, Chistyakova TI (2010) The effect of lipid content on the elemental composition and energy capacity of yeast biomass. Appl Microbiol Biotechnol 88(3):799-806
38. Miyake C (2010) Alternative electron flows (water-water cycle and cyclic electron flow around PSI) in photosynthesis: molecular mechanisms and physiological functions. Plant Cell Physiol 51(12):1951-1963
39. Munekage Y, Hashimoto M, Miyake C, Tonizawa K-I, Endo T, Tasaka M, Shikanai T (2004) Cyclic electron flow around photosystem I is essential for photosynthesis. Nature 429(3):579-582
40. Neijssel OM, Tempest DW (1976) Bioenergetic aspects of aerobic growth of Klebsiella aerogenes NCTC 418 in carbon-limited and carbon-sufficient chemostat culture. Arch Microbiol 107:215-221
41. Nelson DL, Cox MM (2008) Lehninger principles of biochemistry, 5th edn. WH Freeman and Company, New York
42. Nyholm N (1976) A mathematical model for microbial growth under limitation by conservative substrates. Biotechnol Bioeng 18(8):1043-1056
43. Nyholm N (1977) Kinetics of phosphate limited algal growth. Biotechnol Bioeng 19(4):467-492
44. Patel SA, Erickson LE (1981) Estimation of heats of combustion of biomass from elemental analysis using available electron concepts. Biotechnol Bioeng 23:2051-2067
45. Payne WJ (1970) Energy yields and growth of heterotrophs. Annu Revi Microbiol 24:17-52
46. Pettersson G, Ryde-Pettersson U (1988) A mathematical model of the Calvin photosynthesis cycle. Eur J Biochem 175(3):661-672
47. Pirt SJ (1965) The maintenance energy of bacteria in growing cultures. Proc R Soc Ser B: Biol Sci 163(991):224-231
48. Pirt SJ (1975) Principles of microbe and cell growth. Blackwell Scientific Publications, Oxford
49. Pirt SJ (1982) Maintenance energy: a general model for energy-limited and energy-sufficient growth. Arch Microbiol 1982(4):300-302
50. Prigogine I, Defay R (1967) Chemical thermodynamics. Longman, London
51. Remy H (1960) Lehrbuch der Anorganischen Chemie, vol 1. Akademische Verlagsgesellschaft Geest & Portig K.-G, Leipzig
52. Russell JB, Cook JM (1995) Energetics of bacterial growth: balance of anabolic and catabolic reactions. Microbiol Rev 59(1):48-62
53. Singh S, Kate BN, Banerjee UC (2005) Bioactive compounds from cyanobacteria and microalgae: an overview. Crit Rev Biotechnol 25(3):73-95
54. Stull DR, Westrum EF, Sinke GC (1969) The chemical thermodynamics of organic compounds. Wiley, New York
55. Thornton WM (1917) The relation of oxygen to the heat of combustion of organic compounds. Philos Mag 33:196-203
56. Tsygankov AA, Laurinavichene TV (1996) Influence of the degree and mode of light limitation on growth characteristics of the Rhodobacter capsulatus continuous cultures. Biotechnol Bioeng 51(5):605-612