Genetic and Cytological Analysis of a Novel Type of Low Temperature-Dependent Intrasubspecific Hybrid Weakness in Rice

PLoS ONE

Volumn 8, Issue 8, 2013, Pages

  Fu, Chong Yun ^a,b   Wang, Feng ^a,b   Sun, Bing Rui ^a,b   Liu, Wu Ge ^a,b   Li, Jin Hua ^a,b   Deng, Ru Fang ^c   Liu, Di Lin ^a,b   Liu, Zhen Rong ^a,b   Zhu, Man Shan ^a,b   Liao, Yi Long ^a,b   Chen, Jian Wei ^a,b  

^a INSTITUTE OF ANIMAL SCIENCE   (China)

^b Key Laboratory of New Energy Technology for Guangdong Universities   (China)

^c SOUTH CHINA INSTITUTE OF BOTANY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CALMODULIN BINDING PROTEIN;

ARTICLE; CELL COUNT; CELL WALL; CHLOROPLAST; CHROMOSOME 11; CHROMOSOME 7; CONTROLLED STUDY; CROSS BREEDING; CYTOLOGY; GENE AMPLIFICATION; GENE MAPPING; GENETIC ANALYSIS; HW3 GENE; HW4 GENE; HYBRID WEAKNESS; INDEL MUTATION; INTERCELLULAR SPACE; LOW TEMPERATURE; MITOCHONDRION; NONHUMAN; PLANT CELL; PLANT GENE; PLANT GROWTH; PLANT LEAF; POSTZYGOTIC ISOLATION; PROTEIN EXPRESSION; REPRODUCTIVE ISOLATION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RICE; TEMPERATURE DEPENDENCE; VARIETAS;

BASE SEQUENCE; CHLOROPHYLL; CHROMOSOME MAPPING; CHROMOSOME SEGREGATION; COLD TEMPERATURE; CROSSES, GENETIC; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENETIC ASSOCIATION STUDIES; GENETIC LINKAGE; HYBRIDIZATION, GENETIC; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; PHENOTYPE; PHOTOSYNTHESIS; PLANT LEAVES; PLANT ROOTS; SEEDLING; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SPECIES SPECIFICITY;

EID: 84883403506     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0073886     Document Type: Article

References (52)

1. Mallet J, (2006) What does Drosophila genetics tell us about speciation? Trends Ecol Evo 21: 386-393.
2. Rieseberg LH, Willis JH, (2007) Plant speciation. Science 317: 910-914.
3. Dobzhansky T (1937) Genetics and the origin of species. Columbia University Press, New York.161p.
4. Muller HJ, (1942) Isolating mechanisms, evolution, and temperature. Biol Symp 6: 71-124.
5. Coyne JA, Orr HA. (2004) Speciation. Sinauer Associates, Sunderland, MA. 545p.
6. Burke J, Arnold ML, (2001) Genetics and the fitness of hybrids. Annu Rev Genet 35: 31-52.
7. Oka HI, (1957) Phylogenetic differentiation of cultivated rice. XV Complementary lethal genes in rice. Jpn J Genet 32: 83-87.
8. Bomblies K, Lempe J, Epple P, Warthmann N, Lanz C, et al. (2007) Autoimmune response as a mechanism for a Dobzhansky-Muller-Type incompatibility syndrome in plants. PLOS Biology 5(9): 1962-1972.
9. Shii CT, Mok MC, Temple SR, Mok DWS, (1980) Expression of developmental abnormalities of Phaseolus vulgaris L. interaction between temperature and allelic dosage. J Hered 71: 219-22.
10. Tezuka T, Kuboyama T, Matsuda T, Marubashi W, (2007) Possible involvement of genes on the Q chromosome of Nicotiana tabacum in expression of hybrid lethality and programmed cell death during interspecific hybridization to Nicotiana debneyi. Planta 226: 753-64.
11. Wulff BBH, Kruijt M, Collins PL, Thomas CM, Ludwig AA, et al. (2004) Gene shuffling-generated and natural variants of the tomato resistance gene Cf-9 exhibit different auto-necrosis-inducing activities in Nicotiana species. Plant J 40: 942-956.
12. Bomblies K, Weigel D, (2007) Hybrid necrosis: Autoimmunity as a potential gene-flow barrier in plant species. Nat Rev Genet 8: 382-393.
13. Krüger J, Thomas CM, Golstein C, Dixon MS, Smoker M, et al. (2002) A tomato cysteine protease required for Cf-2-dependent disease resistance and suppression of autonecrosis. Science. 296: 744-747.
14. Alcázar R, García AV, Parker JE, Reymond M, (2009) Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation. Proc Natl Acad Sci 106(1): 334-339.
15. Josefsson C, Dilkes B, Comai1 L (2006) Parent-dependent loss of gene silencing during interspecies hybridization. Curr Biol 16: 1322-1328.
16. Blumenstiel JP, Hartl DL, (2005) Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis. Proc Natl Acad Sci 102: 15965-15970.
17. Saito T, Ichitani K, Suzeki T, Marubashi W, Kuboyama T, (2007) Developmantal observation and high temperature rescue from hybrid weakness in a cross between Japanese rice cultivar and Peruvian rice cultivar 'Jamaica'. Breed Sci 57: 281-288.
18. Ichitani K, Namigoshi K, Sato M, Taura S, Aoki M, et al. (2007) Fine mapping and allelic dosage effect of Hwc1, a complementary hybrid weakness gene in rice. Theor Appl Genet 114: 1407-1415.
19. Kuboyama T, Matsumoto T, Wu JZ, Kanamori H, Taura S, et al. (2009) Fine mapping of HWC2, a complementary hybrid weakness gene, and haplotype analysis around the locus in rice. Rice 2: 93-103.
20. Ichitani K. Taura S, Tezuka T, Okiyama Y, Kuboyama T, (2011) Chromosomal location of HWA1 and HWA2, complementary hybrid weakness genes in rice. Rice 4(2): 29-38.
21. Chen C, Chen H, Shan JX, Zhu MZ, Shi M, et al. (2013) Genetic and physiological analysis of a novel type of interspecific hybrid weakness in rice. Mol Plant 6: 716-728.
22. Dropkin VH. 1969. The necrotic reaction of tomato and other hosts resistant to Meloidogyne: Reversal by temperature. Phytopathology 59: 1632-1637.
23. Mirouze M, Sels J, Richard O, Czernic P, Loubet S, et al. (2006) A putative novel role for plant defensins: a defensin from the zinc hyper-accumulating plant, Arabidopsis halleri, confers zinc tolerance. The Plant Jour 47: 329-342.
24. Van Wees SC. (2008) Phenotypic Analysis of Arabidopsis Mutants: Trypan Blue Stain for fungi, oomycetes, and dead Plant Cells. Cold Spring Harb Protoc 3(8) doi: 10.1101/pdb.prot4982.
25. Cui YL, Jia QS, Yin QQ, Lin GN, Kong MM, et al. (2011) The GDC1 Gene Encodes a Novel Ankyrin Domain-Containing Protein That Is Essential for Grana Formation in Arabidopsis. Plant Physiol 155: 130-141.
26. Breuer C, Stacey NJ, West CE, Zhao Y, Chory J, et al. (2007) BIN4, a novel component of the plant DNA topoisomerase VI complex, is required for endoreduplication in Arabidopsis. Plant Cell 19: 3655-3668.
27. International Rice Genome Sequencing Project (IRGSP) (2005) The map-based sequence of the rice genome. Nature 436: 793-800.
28. Hua LX, Wu JZ, Chen CX, Wu WH, He XY, et al. (2012) The isolation of Pi1, an allele at the Pik locus which confers broad spectrum resistance to rice blast. Theor Appl Genet 125: 1047-1055.
29. Singh RP, (1993) Resistance to leaf rust in 26 Mexican wheat cultivars. Crop Sci 33: 633-637.
30. Xu X, Chen H, Fujimura T, Kawasaki S, (2008) Fine mapping of a strong QTL of field resistance against rice blast, Pikahei-1(t), from upland rice Kahei, utilizing a novel resistance evaluation system in the greenhouse. Theor Appl Genet. 117: 997-1008.
31. Terashima T, Fukuoka S, Saka N, Kudo S, (2008) Mapping of a blast field resistance gene Pi39(t) of elite rice strain Chubu 111. Plant Breed127: 485-489.
32. He Q, Li D, Zhu Y, Tan M, Zhang D, et al. (2006) Fine mapping of Xa2, a bacterial blight resistance gene in rice. Mol Breed 17: 1-6.
33. Sardesai N, Kumar A, Rajyashri KR, Nair S, Mohan M, (2002) Identification and mapping of an AFLP marker linked to Gm7, a gall midge resistance gene and its conversion to a SCAR marker for its utility in marker aided selection in rice. Theor Appl Genet 105: 691-8.
34. Wright KM, Lloyd D, Lowry DB, Macnair MR, Willis JH, (2013) Indirect evolution of hybrid lethality due to linkage with selected locus in Mimulus guttatus. PLOS Biology 11(2): e1001497.
35. Hermsen JGTh, (1963b) Sources and distribution of the complementary genes for hybrid necrosis in wheat. Euphytica 12: 147-160.
36. Hatano H, Mizuno N, Matsuda R, Shitsukawa N, Park P, et al. (2012) Dysfunction of mitotic cell division at shoot apices triggered severe growth abortion in interspecific hybrids between tetraploid wheat and Aegilops tauschii. New Phytol. 194: 1143-1154.
37. Reddy VS, Ali GS, Reddy AS, (2003) Characterization of a pathogen-induced calmodulin-binding protein: mapping of four Ca2+-dependent calmodulin binding domains. Plant Mol Biol 52: 143-159.
38. Ali GS, Reddy VS, Lindgren PB, Jakobek JL, Reddy ASN, (2003) Differential expression of genes encoding calmodulin-binding proteins in response to bacterial pathogens and inducers of defense responses. Plant Mol Biol 51: 803-815.
39. Ribot C, Hirsch J, Balzergue S, Tharreau D, Nottéghem JL, et al. (2008) Susceptibility of rice to the blast fungus, Magnaporthe grisea. J. Plant Physiol. 165: 114-124.
40. Li Y, Sun Z, Xu X, Jin M, Liu Y, et al. (2010) Influence of low temperatures on photosystem II photochemistry and expression of the NADPH: protochlorophyllide oxidoreductase in the alpine, subnival perennial, Chorispora bungeana. Photosynthetica 48(3): 457-468.
41. Holá D, Kutík J, Kočová M, Rothová O, (2008) Low-temperature induced changes in the ultrastructure of maize mesophyll chloroplasts strongly depend on the chilling pattern/intensity and considerably differ among inbred and hybrid genotypes. Photosynthetica 46 (3): 329-338.
42. Yin GK, Sun HM, Xin X, Qin GZ, Liang Z, et al. (2009) Mitochondrial damage in the soybean seed axis during imbibition at chilling temperatures. Plant Cell Physiol. 50(7): 1305-1318.
43. Alcá zara R, Garcíab AV, Parkerb J E, Reymonda M, (2009) Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation. Proc Natl Acad Sci USA 106(1): 334-339.
44. Sundberg E, Slagter JG, Fridborg I, Cleary SP, Robinson C, et al. (1997) ALBINO3, an Arabidopsis nuclear gene essential for chloroplast differentiation, encodes a chloroplast protein that shows homology to proteins present in bacterial membranes and yeast mitochondria. Plant Cell 9: 717-730.
45. Rhoads AR, Friedberg F, (1997) Sequence motifs for calmodulin recognition. The FASEB J 11(5): 331-340.
46. Reddy VS, Ali GS, Reddy ASN, (2002) Genes encoding calmodulin-binding proteins in the Arabidopsis genome. J Biol Chem 277(2): 9840-9852.
47. Dymek EE, Goduti D, Kramer T, Smith EF. (2006) A kinesin-like calmodulin-binding protein in Chlamydomonas: evidence for a role in cell division and flagellar functions. J Cell Sci 119, 3107-3116.
48. Preuss ML, Delmer DP, Liu B, (2003) The cotton kinesin-like calmodulin-binding protein associates with cortical microtubules in cotton fibers. Plant Physiol 132: 154-160.
49. Wang L, Tsuda K, Sato M, Cohen JD, Katagiri F, et al. (2009) Arabidopsis CaM binding protein CBP60g contributes to MAMP-induced SA accumulation and is involved in disease resistance against Pseudomonas syringae. PLoS Pathog 5: e1000301 doi:10.1371/journal.ppat.1000301.
50. Yang TB, Poovaiah BW, (2000) Arabidopsis chloroplast chaperonin 10 is a calmodulin-binding protein. Biochem Biophys Res Commun 275: 601-607.
51. Bussemer J, Chigri F, Vothknecht UC, (2009) Arabidopsis ATPase family gene 1-like protein 1 is a calmodulin-binding AAA+-ATPase with a dual localization in chloroplasts and mitochondria. FEBS J 276: 3870-3880.
52. Smith L M, Bomblies K, Weigel D, (2011) Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. PLOS Genetics 7: e1002164.