Spectral cytopathology: New aspects of data collection, manipulation and confounding effects

Analyst

Volumn 138, Issue 14, 2013, Pages 3975-3982

  Miljković, Miloš ^a   Bird, Benjamin ^a   Lenau, Kathleen ^a   Mazur, Antonella I ^a   Diem, Max ^a  

^a NORTHEASTERN UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; CASE CONTROL STUDY; COMPARATIVE STUDY; CYTOLOGY; DIAGNOSTIC IMAGING; HUMAN; INFRARED SPECTROPHOTOMETRY; METHODOLOGY; MOUTH TUMOR; PRECANCER; TONGUE; MOUTH NEOPLASMS; PRECANCEROUS CONDITIONS; PROCEDURES;

ALGORITHMS; CASE-CONTROL STUDIES; DIAGNOSTIC IMAGING; HUMANS; MOUTH NEOPLASMS; PRECANCEROUS CONDITIONS; SPECTROPHOTOMETRY, INFRARED; TONGUE;

EID: 84883294678     PISSN: 00032654     EISSN: 13645528     Source Type: Journal    
DOI: 10.1039/c3an00185g     Document Type: Article

References (24)

1. J. M. Schubert et al., Single point vs. mapping approach for Spectral Cytopathology (SCP) Biophotonics 2010 3 8-9 588-596
2. K. Papamarkakis et al., Cytopathology by optical methods: spectral cytopathology of the oral mucosa Lab. Invest. 2010 90 589-598
3. J. M. Schubert et al., Spectral cytopathology of cervical samples: detecting cellular abnormalities in cytologically normal cells Lab. Invest. 2010 90 1068-1077
4. M. Diem et al., Detection of Viral Infection in Epithelial Cells by Infrared Spectral Cytopathology, in Handbook of Biophotonics, ed. J. Popp, et al., Wiley-VCH Verlag, vol. 2, Photonics for Health Care 2012
5. M. Cohenford B. Rigas Cytologically normal cells from neoplastic cervical samples display extensive structural abnormalities on IR spectroscopy: implications for tumor biology Proc. Natl. Acad. Sci. U. S. A. 1998 95 15327-15332
6. M. G. C. T. van Oijen P. J. Slootweg Oral field cancerization: carcinogen-induced independent events or micrometastatic deposits? Cancer Epidemiol., Biomarkers Prev. 2000 9 249-256
7. J. M. Schubert, Spectral Cytology of Human Oral and Cervical Samples, in Chemistry and Chemical Biology, Northeastern University, Boston, 2011
8. M. Miljković et al., Spectral cytopathology of the oral mucosa: results of a pre-clinical trial. Part I, 2013, in preparation
9. P. Bassan et al., Reflection contributions to the dispersion artefact in FTIR spectra of single biological cells Analyst 2009 134 1171-1175
10. P. Bassan et al., Resonant Mie scattering in infrared spectroscopy of biological materials - understanding the "dispersion artefact" Analyst 2009 134 1586-1593
11. B. Mohlenhoff M. J. Romeo M. Diem B. R. Wood Mie-type scattering and non-Beer-Lambert absorption behavior of human cells in infrared microspectroscopy Biophys. J. 2005 88 5 3635-3640
12. P. Bassan et al., Resonant Mie Scattering (RMieS) correction of infrared spectra from highly scattering biological samples Analyst 2010 135 268-277
13. M. Miljković B. Bird, M. Diem Dispersive line shape effects in infrared spectroscopy Analyst 2012 137 3954-3964
14. J. Filik et al., Electric field standing wave artefacts in FTIR micro-spectroscopy of biological materials Analyst 2012 137 853-861
15. P. Bassan et al., The inherent problem of transflection-mode infrared spectroscopic microscopy and the ramifications for biomedical single point and imaging applications Analyst 2013 138 144-157
16. K. Wehbe et al., The effect of optical substrates on micro-FTIR analysis of single mammalian cells Anal. Bioanal. Chem. 2013 405 1311-1324
17. R. K. Reddy, R. Bhargava Accurate histopathology from low signal-to-noise ratio spectroscopic imaging data Analyst 2010 135 2813-2815
18. E. Marcsisin et al., Noise adjusted principal component reconstruction to optimize infrared microspectroscopy of individual live cells Analyst 2012 136 2958-2964
19. S. W. Bruun et al., Correcting attenuated total reflection-Fourier transform infrared spectra for water vapor and carbon dioxide Appl. Spectrosc. 2006 60 9 1029-1039
20. A. Savitzky, M. J. E. Golay Smoothing and differentiation of data by simplified least-squares procedures Anal. Chem. 1964 36 8 1627-1639
21. J. E. Bertie S. L. Zhang, C. D. Keefe Measurement and use of absolute infrared absorption intensities of neat liquids Vib. Spectrosc. 1995 8 215-229
22. M. J. Adams, Chemometrics in Analytical Spectroscopy, ed. N. W. Barnett, Royal Society of Chemistry, Cambridge, 2nd edn, 2004, RSC Analytical Spectroscopy Monographs
23. P. Lasch et al., Artificial neural networks as supervised techniques for FT-IR microspectroscopic imaging J. Chemom. 2007 20 5 209-220
24. P. Lasch, Computergestuetzte Bildrekonstuktion auf Basis FTIR-mikrospektrometrischer Daten humaner Tumoren, in Humanmedizin, Freie Universitaet Berlin, Berlin, 1999, p. 124