메뉴 건너뛰기




Volumn 13, Issue , 2013, Pages

Aberrant septin 9 DNA methylation in colorectal cancer is restricted to a single CpG island

Author keywords

Adenoma; Colorectal cancer; Direct bisulfite sequencing; DNA methylation; Epithelial cells; Immunohistochemistry; Septin 9; Stromal cells

Indexed keywords

SEPTIN; SEPTIN 9; UNCLASSIFIED DRUG;

EID: 84883274107     PISSN: None     EISSN: 14712407     Source Type: Journal    
DOI: 10.1186/1471-2407-13-398     Document Type: Article
Times cited : (114)

References (44)
  • 1
    • 67449158992 scopus 로고    scopus 로고
    • Stepwise DNA methylation changes are linked to escape from defined proliferation barriers and mammary epithelial cell immortalization
    • 10.1158/0008-5472.CAN-08-4977, 2697259, 19509227
    • Novak P, Jensen TJ, Garbe JC, Stampfer MR, Futscher BW. Stepwise DNA methylation changes are linked to escape from defined proliferation barriers and mammary epithelial cell immortalization. Cancer Res 2009, 69:5251-5258. 10.1158/0008-5472.CAN-08-4977, 2697259, 19509227.
    • (2009) Cancer Res , vol.69 , pp. 5251-5258
    • Novak, P.1    Jensen, T.J.2    Garbe, J.C.3    Stampfer, M.R.4    Futscher, B.W.5
  • 2
    • 29244469466 scopus 로고    scopus 로고
    • The epigenetic progenitor origin of human cancer
    • 10.1038/nrg1748, 16369569
    • Feinberg AP, Ohlsson R, Henikoff S. The epigenetic progenitor origin of human cancer. Nat Rev Genet 2006, 7:21-33. 10.1038/nrg1748, 16369569.
    • (2006) Nat Rev Genet , vol.7 , pp. 21-33
    • Feinberg, A.P.1    Ohlsson, R.2    Henikoff, S.3
  • 3
    • 80053144962 scopus 로고    scopus 로고
    • A decade of exploring the cancer epigenome - biological and translational implications
    • 10.1038/nrc3130, 3307543, 21941284
    • Baylin SB, Jones PA. A decade of exploring the cancer epigenome - biological and translational implications. Nat Rev Cancer 2011, 11:726-734. 10.1038/nrc3130, 3307543, 21941284.
    • (2011) Nat Rev Cancer , vol.11 , pp. 726-734
    • Baylin, S.B.1    Jones, P.A.2
  • 4
    • 0033065099 scopus 로고    scopus 로고
    • MSF (MLL septin-like fusion), a fusion partner gene of MLL, in a therapy-related acute myeloid leukemia with a t(11;17)(q23;q25)
    • 10.1073/pnas.96.11.6428, 26898, 10339604
    • Osaka M, Rowley JD, Zeleznik-Le NJ. MSF (MLL septin-like fusion), a fusion partner gene of MLL, in a therapy-related acute myeloid leukemia with a t(11;17)(q23;q25). Proc Natl Acad Sci U S A 1999, 96:6428-6433. 10.1073/pnas.96.11.6428, 26898, 10339604.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 6428-6433
    • Osaka, M.1    Rowley, J.D.2    Zeleznik-Le, N.J.3
  • 6
    • 0038066467 scopus 로고    scopus 로고
    • The Septin 9 (MSF) gene is amplified and overexpressed in mouse mammary gland adenocarcinomas and human breast cancer cell lines
    • Montagna C, Lyu MS, Hunter K, Lukes L, Lowther W, Reppert T, Hissong B, Weaver Z, Ried T. The Septin 9 (MSF) gene is amplified and overexpressed in mouse mammary gland adenocarcinomas and human breast cancer cell lines. Cancer Res 2003, 63:2179-2187.
    • (2003) Cancer Res , vol.63 , pp. 2179-2187
    • Montagna, C.1    Lyu, M.S.2    Hunter, K.3    Lukes, L.4    Lowther, W.5    Reppert, T.6    Hissong, B.7    Weaver, Z.8    Ried, T.9
  • 7
    • 21344444056 scopus 로고    scopus 로고
    • Multimodality expression profiling shows SEPT9 to be overexpressed in a wide range of human tumours
    • 10.1038/sj.onc.1208574, 15782116
    • Scott M, Hyland PL, McGregor G, Hillan KJ, Russell SE, Hall PA. Multimodality expression profiling shows SEPT9 to be overexpressed in a wide range of human tumours. Oncogene 2005, 24:4688-4700. 10.1038/sj.onc.1208574, 15782116.
    • (2005) Oncogene , vol.24 , pp. 4688-4700
    • Scott, M.1    Hyland, P.L.2    McGregor, G.3    Hillan, K.J.4    Russell, S.E.5    Hall, P.A.6
  • 8
    • 79957507480 scopus 로고    scopus 로고
    • Septins
    • 10.1016/j.cub.2011.03.067, 21601794
    • Estey MP, Kim MS, Trimble WS. Septins. Curr Biol 2011, 21:R384-R387. 10.1016/j.cub.2011.03.067, 21601794.
    • (2011) Curr Biol , vol.21
    • Estey, M.P.1    Kim, M.S.2    Trimble, W.S.3
  • 10
    • 0035855652 scopus 로고    scopus 로고
    • Genomic organization, complex splicing pattern and expression of a human septin gene on chromosome 17q25.3
    • 10.1038/sj.onc.1204752, 11593400
    • McIlhatton MA, Burrows JF, Donaghy PG, Chanduloy S, Johnston PG, Russell SE. Genomic organization, complex splicing pattern and expression of a human septin gene on chromosome 17q25.3. Oncogene 2001, 20:5930-5939. 10.1038/sj.onc.1204752, 11593400.
    • (2001) Oncogene , vol.20 , pp. 5930-5939
    • McIlhatton, M.A.1    Burrows, J.F.2    Donaghy, P.G.3    Chanduloy, S.4    Johnston, P.G.5    Russell, S.E.6
  • 11
    • 77953951585 scopus 로고    scopus 로고
    • Conquering the complex world of human septins: implications for health and disease
    • 10.1111/j.1399-0004.2010.01392.x, 20236126
    • Peterson EA, Petty EM. Conquering the complex world of human septins: implications for health and disease. Clin Genet 2010, 77:511-524. 10.1111/j.1399-0004.2010.01392.x, 20236126.
    • (2010) Clin Genet , vol.77 , pp. 511-524
    • Peterson, E.A.1    Petty, E.M.2
  • 12
    • 31844454774 scopus 로고    scopus 로고
    • Altered patterns of transcription of the septin gene, SEPT9, in ovarian tumorigenesis
    • 10.1002/ijc.21486, 16161048
    • Scott M, McCluggage WG, Hillan KJ, Hall PA, Russell SE. Altered patterns of transcription of the septin gene, SEPT9, in ovarian tumorigenesis. Int J Cancer 2006, 118:1325-1329. 10.1002/ijc.21486, 16161048.
    • (2006) Int J Cancer , vol.118 , pp. 1325-1329
    • Scott, M.1    McCluggage, W.G.2    Hillan, K.J.3    Hall, P.A.4    Russell, S.E.5
  • 13
    • 34548745320 scopus 로고    scopus 로고
    • High SEPT9_v1 expression in human breast cancer cells is associated with oncogenic phenotypes
    • 10.1158/0008-5472.CAN-07-1474, 17875694
    • Gonzalez ME, Peterson EA, Privette LM, Loffreda-Wren JL, Kalikin LM, Petty EM. High SEPT9_v1 expression in human breast cancer cells is associated with oncogenic phenotypes. Cancer Res 2007, 67:8554-8564. 10.1158/0008-5472.CAN-07-1474, 17875694.
    • (2007) Cancer Res , vol.67 , pp. 8554-8564
    • Gonzalez, M.E.1    Peterson, E.A.2    Privette, L.M.3    Loffreda-Wren, J.L.4    Kalikin, L.M.5    Petty, E.M.6
  • 14
    • 34447341733 scopus 로고    scopus 로고
    • Translational control of SEPT9 isoforms is perturbed in disease
    • 10.1093/hmg/ddm003, 17468182
    • McDade SS, Hall PA, Russell SE. Translational control of SEPT9 isoforms is perturbed in disease. Hum Mol Genet 2007, 16:742-752. 10.1093/hmg/ddm003, 17468182.
    • (2007) Hum Mol Genet , vol.16 , pp. 742-752
    • McDade, S.S.1    Hall, P.A.2    Russell, S.E.3
  • 20
    • 77955442473 scopus 로고    scopus 로고
    • From discovery to the clinic: the novel DNA methylation biomarker (m)SEPT9 for the detection of colorectal cancer in blood
    • 10.2217/epi.10.35, 22121975
    • Payne SR. From discovery to the clinic: the novel DNA methylation biomarker (m)SEPT9 for the detection of colorectal cancer in blood. Epigenomics 2010, 2:575-585. 10.2217/epi.10.35, 22121975.
    • (2010) Epigenomics , vol.2 , pp. 575-585
    • Payne, S.R.1
  • 21
    • 84885388128 scopus 로고    scopus 로고
    • Epi proColon website http://www.epigenomics.com/en/products-services/epi-procolon.html.
    • Epi proColon website
  • 23
    • 66149114095 scopus 로고    scopus 로고
    • Analysis of DNA methylation of multiple genes in microdissected cells from formalin-fixed and paraffin-embedded tissues
    • 10.1369/jhc.2009.953026, 2674771, 19153192
    • Dietrich D, Lesche R, Tetzner R, Krispin M, Dietrich J, Haedicke W, Schuster M, Kristiansen G. Analysis of DNA methylation of multiple genes in microdissected cells from formalin-fixed and paraffin-embedded tissues. J Histochem Cytochem 2009, 57:477-489. 10.1369/jhc.2009.953026, 2674771, 19153192.
    • (2009) J Histochem Cytochem , vol.57 , pp. 477-489
    • Dietrich, D.1    Lesche, R.2    Tetzner, R.3    Krispin, M.4    Dietrich, J.5    Haedicke, W.6    Schuster, M.7    Kristiansen, G.8
  • 25
    • 4544293301 scopus 로고    scopus 로고
    • Quantitative DNA methylation analysis based on four-dye trace data from direct sequencing of PCR amplificates
    • 10.1093/bioinformatics/bth346, 15247106
    • Lewin J, Schmitt AO, Adorján P, Hildmann T, Piepenbrock C. Quantitative DNA methylation analysis based on four-dye trace data from direct sequencing of PCR amplificates. Bioinformatics 2004, 20:3005-3012. 10.1093/bioinformatics/bth346, 15247106.
    • (2004) Bioinformatics , vol.20 , pp. 3005-3012
    • Lewin, J.1    Schmitt, A.O.2    Adorján, P.3    Hildmann, T.4    Piepenbrock, C.5
  • 28
    • 33947714707 scopus 로고    scopus 로고
    • Clinical implications and utility of field cancerization
    • 10.1186/1475-2867-7-2, 1838897, 17362521
    • Dakubo GD, Jakupciak JP, Birch-Machin MA, Parr RL. Clinical implications and utility of field cancerization. Cancer Cell Int 2007, 7:2. 10.1186/1475-2867-7-2, 1838897, 17362521.
    • (2007) Cancer Cell Int , vol.7 , pp. 2
    • Dakubo, G.D.1    Jakupciak, J.P.2    Birch-Machin, M.A.3    Parr, R.L.4
  • 29
    • 34047190317 scopus 로고    scopus 로고
    • Epigenetic field for cancerization
    • 10.5483/BMBRep.2007.40.2.142, 17394762
    • Ushijima T. Epigenetic field for cancerization. J Biochem Mol Biol 2007, 40:142-150. 10.5483/BMBRep.2007.40.2.142, 17394762.
    • (2007) J Biochem Mol Biol , vol.40 , pp. 142-150
    • Ushijima, T.1
  • 30
    • 78649639011 scopus 로고    scopus 로고
    • The tumor microenvironment in colorectal carcinogenesis
    • 10.1007/s12307-010-0038-3, 2990487, 21209781
    • Peddareddigari VG, Wang D, Dubois RN. The tumor microenvironment in colorectal carcinogenesis. Cancer Microenviron 2010, 3:149-166. 10.1007/s12307-010-0038-3, 2990487, 21209781.
    • (2010) Cancer Microenviron , vol.3 , pp. 149-166
    • Peddareddigari, V.G.1    Wang, D.2    Dubois, R.N.3
  • 31
    • 33646249638 scopus 로고    scopus 로고
    • Epithelial and stromal genetic instability contributes to genesis of colorectal adenomas
    • 10.1136/gut.2005.079459, 1856111, 16354798
    • Ishiguro K, Yoshida T, Yagishita H, Numata Y, Okayasu T. Epithelial and stromal genetic instability contributes to genesis of colorectal adenomas. Gut 2006, 55:695-702. 10.1136/gut.2005.079459, 1856111, 16354798.
    • (2006) Gut , vol.55 , pp. 695-702
    • Ishiguro, K.1    Yoshida, T.2    Yagishita, H.3    Numata, Y.4    Okayasu, T.5
  • 32
    • 38049184430 scopus 로고    scopus 로고
    • Signal pathway profiling of epithelial and stromal compartments of colonic carcinoma reveals epithelial-mesenchymal transition
    • 10.1038/sj.onc.1210647, 17621268
    • Sheehan KM, Gulmann C, Eichler GS, Weinstein JN, Barrett HL, Kay EW, Conroy RM, Liotta LA, Petricoin EF. Signal pathway profiling of epithelial and stromal compartments of colonic carcinoma reveals epithelial-mesenchymal transition. Oncogene 2008, 27:323-331. 10.1038/sj.onc.1210647, 17621268.
    • (2008) Oncogene , vol.27 , pp. 323-331
    • Sheehan, K.M.1    Gulmann, C.2    Eichler, G.S.3    Weinstein, J.N.4    Barrett, H.L.5    Kay, E.W.6    Conroy, R.M.7    Liotta, L.A.8    Petricoin, E.F.9
  • 33
    • 70350036203 scopus 로고    scopus 로고
    • The ADAMTS12 metalloprotease gene is epigenetically silenced in tumor cells and transcriptionally activated in the stroma during progression of colon cancer
    • 10.1242/jcs.050468, 19638407
    • Moncada-Pazos A, Obaya AJ, Fraga MF, Viloria CG, Capellá G, Gausachs M, Esteller M, López-Otín C, Cal S. The ADAMTS12 metalloprotease gene is epigenetically silenced in tumor cells and transcriptionally activated in the stroma during progression of colon cancer. J Cell Sci 2009, 122:2906-2913. 10.1242/jcs.050468, 19638407.
    • (2009) J Cell Sci , vol.122 , pp. 2906-2913
    • Moncada-Pazos, A.1    Obaya, A.J.2    Fraga, M.F.3    Viloria, C.G.4    Capellá, G.5    Gausachs, M.6    Esteller, M.7    López-Otín, C.8    Cal, S.9
  • 36
    • 77951757643 scopus 로고    scopus 로고
    • Pseudopodial actin dynamics control epithelial-mesenchymal transition in metastatic cancer cells
    • 10.1158/0008-5472.CAN-09-4439, 20388789
    • Shankar J, Messenberg A, Chan J, Underhill TM, Foster LJ, Nabi IR. Pseudopodial actin dynamics control epithelial-mesenchymal transition in metastatic cancer cells. Cancer Res 2010, 70:3780-3790. 10.1158/0008-5472.CAN-09-4439, 20388789.
    • (2010) Cancer Res , vol.70 , pp. 3780-3790
    • Shankar, J.1    Messenberg, A.2    Chan, J.3    Underhill, T.M.4    Foster, L.J.5    Nabi, I.R.6
  • 37
    • 79956330964 scopus 로고    scopus 로고
    • CpG islands and the regulation of transcription
    • 10.1101/gad.2037511, 3093116, 21576262
    • Deaton AM, Bird A. CpG islands and the regulation of transcription. Genes Dev 2011, 25:1010-1022. 10.1101/gad.2037511, 3093116, 21576262.
    • (2011) Genes Dev , vol.25 , pp. 1010-1022
    • Deaton, A.M.1    Bird, A.2
  • 40
    • 78651291113 scopus 로고    scopus 로고
    • NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
    • 3013793, 20965971
    • Hackenberg M, Barturen G, Oliver JL. NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data. Nucleic Acids Res 2011, 39(Database issue):D75-D79. 3013793, 20965971.
    • (2011) Nucleic Acids Res , vol.39 , Issue.DATABASE ISSUE
    • Hackenberg, M.1    Barturen, G.2    Oliver, J.L.3
  • 41
    • 35548990188 scopus 로고    scopus 로고
    • We gather together: insulators and genome organization
    • 10.1016/j.gde.2007.08.005, 2215060, 17913488
    • Wallace JA, Felsenfeld G. We gather together: insulators and genome organization. Curr Opin Genet Dev 2007, 17:400-407. 10.1016/j.gde.2007.08.005, 2215060, 17913488.
    • (2007) Curr Opin Genet Dev , vol.17 , pp. 400-407
    • Wallace, J.A.1    Felsenfeld, G.2
  • 43
    • 71849115415 scopus 로고    scopus 로고
    • A distinct DNA-methylation boundary in the 5′- upstream sequence of the FMR1 promoter binds nuclear proteins and is lost in fragile X syndrome
    • 10.1016/j.ajhg.2009.09.018, 2775827, 19853235
    • Naumann A, Hochstein N, Weber S, Fanning E, Doerfler W. A distinct DNA-methylation boundary in the 5′- upstream sequence of the FMR1 promoter binds nuclear proteins and is lost in fragile X syndrome. Am J Hum Genet 2009, 85:606-616. 10.1016/j.ajhg.2009.09.018, 2775827, 19853235.
    • (2009) Am J Hum Genet , vol.85 , pp. 606-616
    • Naumann, A.1    Hochstein, N.2    Weber, S.3    Fanning, E.4    Doerfler, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.