-
1
-
-
76549103412
-
Reflections on studies of gene expression in aneuploids
-
Birchler, J.A. (2010). Reflections on studies of gene expression in aneuploids. Biochem. J. 426: 119-123.
-
(2010)
Biochem. J.
, vol.426
, pp. 119-123
-
-
Birchler, J.A.1
-
2
-
-
15244350824
-
Dosage balance in gene regulation: Biological implications
-
Birchler, J.A., Riddle, N.C., Auger, D.L., and Veitia, R.A. (2005). Dosage balance in gene regulation: Biological implications. Trends Genet. 21: 219-226.
-
(2005)
Trends Genet.
, vol.21
, pp. 219-226
-
-
Birchler, J.A.1
Riddle, N.C.2
Auger, D.L.3
Veitia, R.A.4
-
3
-
-
0030777769
-
B chromosomes: A physiological enigma
-
Bougourd, S.M., and Jones, R.N. (1997). B chromosomes: A physiological enigma. New Phytol. 137: 43-54.
-
(1997)
New Phytol.
, vol.137
, pp. 43-54
-
-
Bougourd, S.M.1
Jones, R.N.2
-
4
-
-
0034728446
-
B-chromosome evolution
-
Camacho, J.P.M., Sharbel, T.F., and Beukeboom, L.W. (2000). B-chromosome evolution. Philos. Trans. R. Soc. Lond. B Biol. Sci. 355: 163-178.
-
(2000)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.355
, pp. 163-178
-
-
Camacho, J.P.M.1
Sharbel, T.F.2
Beukeboom, L.W.3
-
5
-
-
34547674454
-
Transcriptionally active heterochromatin in rye B chromosomes
-
Carchilan, M., Delgado, M., Ribeiro, T., Costa-Nunes, P., Caperta, A., Morais-Cecílio, L., Jones, R.N., Viegas, W., and Houben, A. (2007). Transcriptionally active heterochromatin in rye B chromosomes. Plant Cell 19: 1738-1749.
-
(2007)
Plant Cell
, vol.19
, pp. 1738-1749
-
-
Carchilan, M.1
Delgado, M.2
Ribeiro, T.3
Costa-Nunes, P.4
Caperta, A.5
Morais-Cecílio, L.6
Jones, R.N.7
Viegas, W.8
Houben, A.9
-
6
-
-
69249217780
-
Rye B chromosomes are weakly transcribed and might alter the transcriptional activity of A chromosome sequences
-
Carchilan, M., Kumke, K., Mikolajewski, S., and Houben, A. (2009). Rye B chromosomes are weakly transcribed and might alter the transcriptional activity of A chromosome sequences. Chromosoma 118: 607-616.
-
(2009)
Chromosoma
, vol.118
, pp. 607-616
-
-
Carchilan, M.1
Kumke, K.2
Mikolajewski, S.3
Houben, A.4
-
7
-
-
84919868313
-
The B chromosome of maize
-
In J.L. Bennetzen and S. Hake, eds (New York: Springer)
-
Carlson, W. (2009). The B chromosome of maize. In Handbook of Maize J.L. Bennetzen and S. Hake, eds (New York: Springer), pp. 459-480.
-
(2009)
Handbook of Maize
, pp. 459-480
-
-
Carlson, W.1
-
8
-
-
0023277545
-
Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
-
Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
-
(1987)
Anal. Biochem.
, vol.162
, pp. 156-159
-
-
Chomczynski, P.1
Sacchi, N.2
-
9
-
-
70149110707
-
The genome of Nectria haematococca: Contribution of supernumerary chromosomes to gene expansion
-
Coleman, J.J., et al. (2009). The genome of Nectria haematococca: Contribution of supernumerary chromosomes to gene expansion. PLoS Genet. 5: e1000618.
-
(2009)
PLoS Genet.
, vol.5
-
-
Coleman, J.J.1
-
10
-
-
42049115115
-
Dissection of rye B chromosomes, and nondisjunction properties of the dissected segments in a common wheat background
-
Endo, T.R., Nasuda, S., Jones, N., Dou, Q., Akahori, A., Wakimoto, M., Tanaka, H., Niwa, K., and Tsujimoto, H. (2008). Dissection of rye B chromosomes, and nondisjunction properties of the dissected segments in a common wheat background. Genes Genet. Syst. 83: 23-30.
-
(2008)
Genes Genet. Syst.
, vol.83
, pp. 23-30
-
-
Endo, T.R.1
Nasuda, S.2
Jones, N.3
Dou, Q.4
Akahori, A.5
Wakimoto, M.6
Tanaka, H.7
Niwa, K.8
Tsujimoto, H.9
-
11
-
-
0036023140
-
Macrobotanical evidence for plant use at Neolithic Çatalhöyük, southcentral Anatolia, Turkey
-
Fairbairn, A., Asouti, E., Near, J., and Martinoli, D. (2002). Macrobotanical evidence for plant use at Neolithic Çatalhöyük, southcentral Anatolia, Turkey. Veg. Hist. Archaeobot. 11: 41-54.
-
(2002)
Veg. Hist. Archaeobot.
, vol.11
, pp. 41-54
-
-
Fairbairn, A.1
Asouti, E.2
Near, J.3
Martinoli, D.4
-
12
-
-
0035064227
-
Identification of Bilby, a diverged centromeric Ty1-copia retrotransposon family from cereal rye (Secale cereale L.)
-
Francki, M.G. (2001). Identification of Bilby, a diverged centromeric Ty1-copia retrotransposon family from cereal rye (Secale cereale L.). Genome 44: 266-274.
-
(2001)
Genome
, vol.44
, pp. 266-274
-
-
Francki, M.G.1
-
13
-
-
0025636102
-
Muller's ratchet and the evolution of supernumerary chromosomes
-
Green, D.M. (1990). Muller's ratchet and the evolution of supernumerary chromosomes. Genome 33: 818-824.
-
(1990)
Genome
, vol.33
, pp. 818-824
-
-
Green, D.M.1
-
14
-
-
80053354042
-
From RNA-seq to large-scale genotyping-Genomics resources for rye (Secale cereale L.)
-
Haseneyer, G., Schmutzer, T., Seidel, M., Zhou, R., Mascher, M., Schön, C.C., Taudien, S., Scholz, U., Stein, N., Mayer, K.F., and Bauer, E. (2011). From RNA-seq to large-scale genotyping-Genomics resources for rye (Secale cereale L.). BMC Plant Biol. 11: 131.
-
(2011)
BMC Plant Biol.
, vol.11
, pp. 131
-
-
Haseneyer, G.1
Schmutzer, T.2
Seidel, M.3
Zhou, R.4
Mascher, M.5
Schön, C.C.6
Taudien, S.7
Scholz, U.8
Stein, N.9
Mayer, K.F.10
Bauer, E.11
-
15
-
-
0001112224
-
On the origins of domesticated rye-Secale cereale: The finds from Aceramic Can Hasan III in Turkey
-
Hillmann, G.C. (1978). On the origins of domesticated rye-Secale cereale: The finds from Aceramic Can Hasan III in Turkey. Anatolian Stud. 28: 157-174.
-
(1978)
Anatolian Stud.
, vol.28
, pp. 157-174
-
-
Hillmann, G.C.1
-
16
-
-
0034952307
-
New evidence of Lateglacial cereal cultivation at Abu Hureyra on the Euphrates
-
Hillman, G., Hedges, R., Moore, A., Colledge, S., and Pettitt, P. (2001). New evidence of Lateglacial cereal cultivation at Abu Hureyra on the Euphrates. Holocene 11: 383-393.
-
(2001)
Holocene
, vol.11
, pp. 383-393
-
-
Hillman, G.1
Hedges, R.2
Moore, A.3
Colledge, S.4
Pettitt, P.5
-
17
-
-
84966147752
-
B-chromosome selection in Allium schoenoprasum. 2. Experimental populations
-
Holmes, D.S., and Bougourd, S.M. (1991). B-chromosome selection in Allium schoenoprasum. 2. Experimental populations. Heredity 67: 117-122.
-
(1991)
Heredity
, vol.67
, pp. 117-122
-
-
Holmes, D.S.1
Bougourd, S.M.2
-
18
-
-
84930726765
-
Biology and evolution of B chromosomes
-
In J. Greilhuber, J. Dolezel, and J.F. Wendel, eds (Vienna: Springer Press)
-
Houben, A., Banaei-Moghaddam, A., and Klemme, S. (2013). Biology and evolution of B chromosomes. In Plant Genome Diversity, Vol. 2., J. Greilhuber, J. Dolezel, and J.F. Wendel, eds (Vienna: Springer Press) pp. 149-166.
-
(2013)
Plant Genome Diversity
, vol.2
, pp. 149-166
-
-
Houben, A.1
Banaei-Moghaddam, A.2
Klemme, S.3
-
19
-
-
79953781406
-
Plant B chromosomes
-
Houben, A., Nasuda, S., and Endo, T.R. (2011). Plant B chromosomes. Methods Mol. Biol. 701: 97-111.
-
(2011)
Methods Mol. Biol.
, vol.701
, pp. 97-111
-
-
Houben, A.1
Nasuda, S.2
Endo, T.R.3
-
20
-
-
0028130890
-
B-chromosomes in inbred lines of rye (Secale cereale L). 1. Vigor and fertility
-
Jimenez, M.M., Romera, F., Puertas, M.J., and Jones, R.N. (1994). B-chromosomes in inbred lines of rye (Secale cereale L). 1. Vigor and fertility. Genetica 92: 149-154.
-
(1994)
Genetica
, vol.92
, pp. 149-154
-
-
Jimenez, M.M.1
Romera, F.2
Puertas, M.J.3
Jones, R.N.4
-
21
-
-
0029199676
-
Tansley Review No 85, B chromosomes in plants
-
Jones, R.N. (1995). Tansley Review No 85, B chromosomes in plants. New Phytol. 131: 411-434.
-
(1995)
New Phytol.
, vol.131
, pp. 411-434
-
-
Jones, R.N.1
-
22
-
-
0004068614
-
-
1st ed. (London, New York: Academic Press)
-
Jones, R.N., and Rees, H. (1982). B Chromosomes, 1st ed. (London, New York: Academic Press).
-
(1982)
B Chromosomes
-
-
Jones, R.N.1
Rees, H.2
-
23
-
-
84879619218
-
High-copy sequences reveal distinct evolution of the rye B chromosome
-
Klemme, S., Banaei-Moghaddam, A.M., Macas, J., Wicker, T., Novák, P., and Houben, A. (2013). High-copy sequences reveal distinct evolution of the rye B chromosome. New Phytol. 199: 550-558.
-
(2013)
New Phytol.
, vol.199
, pp. 550-558
-
-
Klemme, S.1
Banaei-Moghaddam, A.M.2
Macas, J.3
Wicker, T.4
Novák, P.5
Houben, A.6
-
24
-
-
26444586244
-
Molecular evidence for transcription of genes on a B chromosome in Crepis capillaris
-
Leach, C.R., Houben, A., Field, B., Pistrick, K., Demidov, D., and Timmis, J.N. (2005). Molecular evidence for transcription of genes on a B chromosome in Crepis capillaris. Genetics 171: 269-278.
-
(2005)
Genetics
, vol.171
, pp. 269-278
-
-
Leach, C.R.1
Houben, A.2
Field, B.3
Pistrick, K.4
Demidov, D.5
Timmis, J.N.6
-
25
-
-
37849044967
-
Polymorphic Y chromosomes harbor cryptic variation with manifold functional consequences
-
Lemos, B., Araripe, L.O., and Hartl, D.L. (2008). Polymorphic Y chromosomes harbor cryptic variation with manifold functional consequences. Science 319: 91-93.
-
(2008)
Science
, vol.319
, pp. 91-93
-
-
Lemos, B.1
Araripe, L.O.2
Hartl, D.L.3
-
26
-
-
84979192909
-
Transfer to wheat of accessory chromosomes from rye
-
Lindström, J. (1965). Transfer to wheat of accessory chromosomes from rye. Hereditas 54: 149-155.
-
(1965)
Hereditas
, vol.54
, pp. 149-155
-
-
Lindström, J.1
-
27
-
-
51549086723
-
Structure and dynamics of retrotransposons at wheat centromeres and pericentromeres
-
Liu, Z., Yue, W., Li, D., Wang, R.R., Kong, X., Lu, K., Wang, G., Dong, Y., Jin, W., and Zhang, X. (2008). Structure and dynamics of retrotransposons at wheat centromeres and pericentromeres. Chromosoma 117: 445-456.
-
(2008)
Chromosoma
, vol.117
, pp. 445-456
-
-
Liu, Z.1
Yue, W.2
Li, D.3
Wang, R.R.4
Kong, X.5
Lu, K.6
Wang, G.7
Dong, Y.8
Jin, W.9
Zhang, X.10
-
28
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch, M., and Conery, J.S. (2000). The evolutionary fate and consequences of duplicate genes. Science 290: 1151-1155.
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
29
-
-
78649976495
-
Synteny between Brachypodium distachyon and Hordeum vulgare as revealed by FISH
-
Ma, L., Vu, G.T.H., Schubert, V., Watanabe, K., Stein, N., Houben, A., and Schubert, I. (2010). Synteny between Brachypodium distachyon and Hordeum vulgare as revealed by FISH. Chromosome Res. 18: 841-850.
-
(2010)
Chromosome Res.
, vol.18
, pp. 841-850
-
-
Ma, L.1
Vu, G.T.H.2
Schubert, V.3
Watanabe, K.4
Stein, N.5
Houben, A.6
Schubert, I.7
-
30
-
-
84880860307
-
B chromosomes of rye are highly conserved and accompanied the development of early agriculture
-
(June 5)
-
Marques, A., Banaei-Moghaddam, A.M., Klemme, S., Blattner, F. R., Niwa, K., Guerra, M., and Houben, A. (June 5, 2013). B chromosomes of rye are highly conserved and accompanied the development of early agriculture. Ann. Bot. 112: 527-534.
-
(2013)
Ann. Bot.
, vol.112
, pp. 527-534
-
-
Marques, A.1
Banaei-Moghaddam, A.M.2
Klemme, S.3
Blattner, F.R.4
Niwa, K.5
Guerra, M.6
Houben, A.7
-
31
-
-
84865161947
-
Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences
-
Martis, M.M., et al. (2012). Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences. Proc. Natl. Acad. Sci. USA 109: 13343-13346.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 13343-13346
-
-
Martis, M.M.1
-
32
-
-
0033615073
-
Chromosomal location effects on gene sequence evolution in mammals
-
Matassi, G., Sharp, P.M., and Gautier, C. (1999). Chromosomal location effects on gene sequence evolution in mammals. Curr. Biol. 9: 786-791.
-
(1999)
Curr. Biol.
, vol.9
, pp. 786-791
-
-
Matassi, G.1
Sharp, P.M.2
Gautier, C.3
-
33
-
-
33847077659
-
Beyond the sequence: Cellular organization of genome function
-
Misteli, T. (2007). Beyond the sequence: Cellular organization of genome function. Cell 128: 787-800.
-
(2007)
Cell
, vol.128
, pp. 787-800
-
-
Misteli, T.1
-
34
-
-
0029167951
-
Origin of B chromosomes in cultivated rye
-
Niwa, K., and Sakamoto, S. (1995). Origin of B chromosomes in cultivated rye. Genome 38: 307-312.
-
(1995)
Genome
, vol.38
, pp. 307-312
-
-
Niwa, K.1
Sakamoto, S.2
-
35
-
-
0029797532
-
Detection of B chromosomes in rye collected from Pakistan and China
-
Niwa, K., and Sakamoto, S. (1996). Detection of B chromosomes in rye collected from Pakistan and China. Hereditas 124: 211-215.
-
(1996)
Hereditas
, vol.124
, pp. 211-215
-
-
Niwa, K.1
Sakamoto, S.2
-
36
-
-
84866543760
-
Pseudogenes: Newly discovered players in human cancer
-
Poliseno, L. (2012). Pseudogenes: Newly discovered players in human cancer. Sci. Signal. 5: re5.
-
(2012)
Sci. Signal.
, vol.5
-
-
Poliseno, L.1
-
37
-
-
77958167961
-
Dosage compensation and the global re-balancing of aneuploid genomes
-
Prestel, M., Feller, C., and Becker, P.B. (2010). Dosage compensation and the global re-balancing of aneuploid genomes. Genome Biol. 11: 216.
-
(2010)
Genome Biol.
, vol.11
, pp. 216
-
-
Prestel, M.1
Feller, C.2
Becker, P.B.3
-
38
-
-
0034065724
-
Ab initio gene finding in Drosophila genomic DNA
-
Salamov, A.A., and Solovyev, V.V. (2000). Ab initio gene finding in Drosophila genomic DNA. Genome Res. 10: 516-522.
-
(2000)
Genome Res.
, vol.10
, pp. 516-522
-
-
Salamov, A.A.1
Solovyev, V.V.2
-
39
-
-
0024966756
-
Chromosomal location and evolutionary rate variation in enterobacterial genes
-
Sharp, P.M., Shields, D.C., Wolfe, K.H., and Li, W.H. (1989). Chromosomal location and evolutionary rate variation in enterobacterial genes. Science 246: 808-810.
-
(1989)
Science
, vol.246
, pp. 808-810
-
-
Sharp, P.M.1
Shields, D.C.2
Wolfe, K.H.3
Li, W.H.4
-
40
-
-
65549125469
-
Transcriptionally active gene fragments derived from potentially fast-evolving donor genes in the rice genome
-
Wang, X.F., Yu, Z.H., Yang, X.Z., Deng, X.W., and Li, L. (2009). Transcriptionally active gene fragments derived from potentially fast-evolving donor genes in the rice genome. Bioinformatics 25: 1215-1218.
-
(2009)
Bioinformatics
, vol.25
, pp. 1215-1218
-
-
Wang, X.F.1
Yu, Z.H.2
Yang, X.Z.3
Deng, X.W.4
Li, L.5
-
41
-
-
77956284088
-
Patching gaps in plant genomes results in gene movement and erosion of colinearity
-
Wicker, T., Buchmann, J.P., and Keller, B. (2010). Patching gaps in plant genomes results in gene movement and erosion of colinearity. Genome Res. 20: 1229-1237.
-
(2010)
Genome Res.
, vol.20
, pp. 1229-1237
-
-
Wicker, T.1
Buchmann, J.P.2
Keller, B.3
-
42
-
-
79959839889
-
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives
-
Wicker, T., et al. (2011). Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives. Plant Cell 23: 1706-1718.
-
(2011)
Plant Cell
, vol.23
, pp. 1706-1718
-
-
Wicker, T.1
-
43
-
-
68049129846
-
Late Pleistocene and early Holocene climate and the beginnings of cultivation in northern Syria
-
Willcox, G., Buxo, R., and Herveux, L. (2009). Late Pleistocene and early Holocene climate and the beginnings of cultivation in northern Syria. Holocene 19: 151-158.
-
(2009)
Holocene
, vol.19
, pp. 151-158
-
-
Willcox, G.1
Buxo, R.2
Herveux, L.3
-
44
-
-
80052327146
-
B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes
-
Yoshida, K., Terai, Y., Mizoiri, S., Aibara, M., Nishihara, H., Watanabe, M., Kuroiwa, A., Hirai, H., Hirai, Y., Matsuda, Y., and Okada, N. (2011). B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes. PLoS Genet. 7: e1002203.
-
(2011)
PLoS Genet.
, vol.7
-
-
Yoshida, K.1
Terai, Y.2
Mizoiri, S.3
Aibara, M.4
Nishihara, H.5
Watanabe, M.6
Kuroiwa, A.7
Hirai, H.8
Hirai, Y.9
Matsuda, Y.10
Okada, N.11
|