-
1
-
-
15044340366
-
Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB
-
Afonyushkin, T., B. Vecerek, I. Moll, U. Blasi, and V. R. Kaberdin, 2005 Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB. Nucleic Acids Res. 33(5): 1678-1689.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.5
, pp. 1678-1689
-
-
Afonyushkin, T.1
Vecerek, B.2
Moll, I.3
Blasi, U.4
Kaberdin, V.R.5
-
2
-
-
38949188739
-
Non-coding RNAs regulating the transcriptional machinery
-
Barrandon, C., B. Spiluttini, and O. Bensaude, 2008 Non-coding RNAs regulating the transcriptional machinery. Biol. Cell 100(2): 83-95.
-
(2008)
Biol. Cell
, vol.100
, Issue.2
, pp. 83-95
-
-
Barrandon, C.1
Spiluttini, B.2
Bensaude, O.3
-
3
-
-
77954925946
-
Identification of a protein required for recovery of full antenna capacity in OCP-related photoprotective mechanism in cyanobacteria
-
Boulay, C., A. Wilson, S. D'Haene, and D. Kirilovsky, 2010 Identification of a protein required for recovery of full antenna capacity in OCP-related photoprotective mechanism in cyanobacteria. Proc. Natl. Acad. Sci. USA 107(25): 11620-11625.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, Issue.25
, pp. 11620-11625
-
-
Boulay, C.1
Wilson, A.2
D'Haene, S.3
Kirilovsky, D.4
-
4
-
-
57249083988
-
IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions
-
Busch, A., A. S. Richter, and R. Backofen, 2008 IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions. Bioinformatics 24(24): 2849-2856.
-
(2008)
Bioinformatics
, vol.24
, Issue.24
, pp. 2849-2856
-
-
Busch, A.1
Richter, A.S.2
Backofen, R.3
-
5
-
-
80054913314
-
Membrane attachment of Slr0006 in Synechocystis sp.PCC 6803 is determined by divalent ions
-
Carmel, D., P. Mulo, N. Battchikova, and E.-M. Aro, 2011 Membrane attachment of Slr0006 in Synechocystis sp. PCC 6803 is determined by divalent ions. Photosynth. Res. 108(2): 241-245.
-
(2011)
Photosynth. Res.
, vol.108
, Issue.2
, pp. 241-245
-
-
Carmel, D.1
Mulo, P.2
Battchikova, N.3
Aro, E.M.4
-
6
-
-
77952922398
-
Euryarchaeal beta-CASP proteins with homology to bacterial RNase J have 59- to 39- exoribonuclease activity
-
Clouet-d'Orval,B., D. Rinaldi, Y. Quentin, andA. J.Carpousis, 2010 Euryarchaeal beta-CASP proteins with homology to bacterial RNase J have 59- to 39- exoribonuclease activity. J. Biol. Chem. 285(23): 17574-17583.
-
(2010)
J. Biol. Chem.
, vol.285
, Issue.23
, pp. 17574-17583
-
-
Clouet-d'Orval, B.1
Rinaldi, D.2
Quentin, Y.3
Carpousis, A.J.4
-
7
-
-
79959209134
-
Iron homeostasis and management of oxidative stress response in bacteria
-
Cornelis, P., Q. Wei, S. C. Andrews, and T. Vinckx, 2011 Iron homeostasis and management of oxidative stress response in bacteria. Metallomics 3(6): 540-549.
-
(2011)
Metallomics
, vol.3
, Issue.6
, pp. 540-549
-
-
Cornelis, P.1
Wei, Q.2
Andrews, S.C.3
Vinckx, T.4
-
8
-
-
0023555634
-
Transcriptional analysis of the cyanobacterial gvpABC operon in differentiated cells: occurrence of an antisense RNA complementary to three overlapping transcripts
-
Csiszar, K., J. Houmard, T. Damerval, and N. Tandeau de Marsac, 1987 Transcriptional analysis of the cyanobacterial gvpABC operon in differentiated cells: occurrence of an antisense RNA complementary to three overlapping transcripts. Gene 60: 8.
-
(1987)
Gene
, vol.60
, pp. 8
-
-
Csiszar, K.1
Houmard, J.2
Damerval, T.3
Tandeau de Marsac, N.4
-
9
-
-
34547871639
-
GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor
-
Davis, S., and P. S. Meltzer, 2007 GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. Bioinformatics 23(14): 1846-1847.
-
(2007)
Bioinformatics
, vol.23
, Issue.14
, pp. 1846-1847
-
-
Davis, S.1
Meltzer, P.S.2
-
10
-
-
0034657405
-
An evolutionarily conserved RNA stem-loop functions as a sensor that directs feedback regulation of RNase E gene expression
-
Diwa, A., A. L. Bricker, C. Jain, and J. G. Belasco, 2000 An evolutionarily conserved RNA stem-loop functions as a sensor that directs feedback regulation of RNase E gene expression. Genes Dev. 14(10): 1249-1260.
-
(2000)
Genes Dev
, vol.14
, Issue.10
, pp. 1249-1260
-
-
Diwa, A.1
Bricker, A.L.2
Jain, C.3
Belasco, J.G.4
-
11
-
-
60249085223
-
Psb28 protein is involved in the biogenesis of the photosystem II inner antenna CP47 (PsbB) in the cyanobacterium Synechocystis sp
-
Dobáková, M., R. Sobotka, M. Tichý, and J. Komenda, 2009 Psb28 protein is involved in the biogenesis of the photosystem II inner antenna CP47 (PsbB) in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol. 149(2): 1076-1086.
-
(2009)
PCC 6803.Plant Physiol.
, vol.149
, Issue.2
, pp. 1076-1086
-
-
Dobáková, M.1
Sobotka, R.2
Tichý, M.3
Komenda, J.4
-
12
-
-
0034046748
-
Fur positive regulation of iron superoxide dismutase in Escherichia coli: functional analysis of the sodB promoter
-
Dubrac, S., and D. Touati, 2000 Fur positive regulation of iron superoxide dismutase in Escherichia coli: functional analysis of the sodB promoter. J. Bacteriol. 182(13): 3802-3808.
-
(2000)
J. Bacteriol.
, vol.182
, Issue.13
, pp. 3802-3808
-
-
Dubrac, S.1
Touati, D.2
-
13
-
-
33646471951
-
An internal antisense RNA regulates expression of the photosynthesis gene isiA
-
Duhring, U., I. M. Axmann, W. R. Hess, and A. Wilde, 2006 An internal antisense RNA regulates expression of the photosynthesis gene isiA. Proc. Natl. Acad. Sci. USA 103(18): 7054-7058.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, Issue.18
, pp. 7054-7058
-
-
Duhring, U.1
Axmann, I.M.2
Hess, W.R.3
Wilde, A.4
-
14
-
-
34249747793
-
Late assembly steps and dynamics of the cyanobacterial photosystem I
-
Dühring, U., F. Ossenbühl, and A. Wilde, 2007 Late assembly steps and dynamics of the cyanobacterial photosystem I. J. Biol. Chem. 282(15): 10915-10921.
-
(2007)
J. Biol. Chem.
, vol.282
, Issue.15
, pp. 10915-10921
-
-
Dühring, U.1
Ossenbühl, F.2
Wilde, A.3
-
15
-
-
84866931878
-
The antisense RNA As1_flv4 in the cyanobacterium Synechocystis sp. PCC 6803 prevents premature expression of the flv4-2 operon upon shift in inorganic carbon supply
-
Eisenhut, M., J. Georg, S. Klaehn, I. Sakurai, H. Mustila et al., 2012 The antisense RNA As1_flv4 in the cyanobacterium Synechocystis sp. PCC 6803 prevents premature expression of the flv4-2 operon upon shift in inorganic carbon supply. J. Biol. Chem. 287: 33153-33162.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 33153-33162
-
-
Eisenhut, M.1
Georg, J.2
Klaehn, S.3
Sakurai, I.4
Mustila, H.5
-
16
-
-
17844361922
-
Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E
-
Even, S., O. Pellegrini, L. Zig, V. Labas, J. Vinh et al., 2005 Ribonucleases J1 and J2: two novel endoribonucleases in B.subtilis with functional homology to E.coli RNase E. Nucleic Acids Res. 33(7): 2141-2152.
-
(2005)
coli RNase E. Nucleic Acids Res.
, vol.33
, Issue.7
, pp. 2141-2152
-
-
Even, S.1
Pellegrini, O.2
Zig, L.3
Labas, V.4
Vinh, J.5
-
17
-
-
0037993832
-
Transition metal speciation in the cell: insights from the chemistry of metal ion receptors
-
Finney, L. A., and T. V. O'Halloran, 2003 Transition metal speciation in the cell: insights from the chemistry of metal ion receptors. Science 300 (5621): 931-936.
-
(2003)
Science
, vol.300
, Issue.5621
, pp. 931-936
-
-
Finney, L.A.1
O'Halloran, T.V.2
-
18
-
-
15044361204
-
Photosynthetic nitrate assimilation in cyanobacteria
-
Flores, E., J. E. Frías, L. M. Rubio, and A. Herrero, 2005 Photosynthetic nitrate assimilation in cyanobacteria. Photosynth. Res. 83(2): 117-133.
-
(2005)
Photosynth.Res.
, vol.83
, Issue.2
, pp. 117-133
-
-
Flores, E.1
Frías, J.E.2
Rubio, L.M.3
Herrero, A.4
-
19
-
-
22544432531
-
Noise-robust soft clustering of gene expression time-course data
-
Futschik, M. E., and B. Carlisle, 2005 Noise-robust soft clustering of gene expression time-course data. J. Bioinform. Comput. Biol. 3(4): 965-988.
-
(2005)
J. Bioinform. Comput. Biol.
, vol.3
, Issue.4
, pp. 965-988
-
-
Futschik, M.E.1
Carlisle, B.2
-
20
-
-
17444399363
-
OLIN: optimized normalization, visualization and quality testing of two-channel microarray data
-
Futschik, M. E., and T. Crompton, 2005 OLIN: optimized normalization, visualization and quality testing of two-channel microarray data. Bioinformatics 21(8): 1724-1726.
-
(2005)
Bioinformatics
, vol.21
, Issue.8
, pp. 1724-1726
-
-
Futschik, M.E.1
Crompton, T.2
-
21
-
-
84862790110
-
A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis
-
Garcin, P., O. Delalande, J. Y. Zhang, C. Cassier-Chauvat, F. Chauvat et al., 2012 A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis. BMC Struct. Biol. 12: 1.
-
(2012)
BMC Struct. Biol
, vol.12
, pp. 1
-
-
Garcin, P.1
Delalande, O.2
Zhang, J.Y.3
Cassier-Chauvat, C.4
Chauvat, F.5
-
22
-
-
79958047291
-
cis-Antisense RNA, another level of gene regulation in bacteria
-
Georg, J., and W. R. Hess, 2011 cis-Antisense RNA, another level of gene regulation in bacteria. Microbiol. Mol. Biol. Rev. 75(2): 286-300.
-
(2011)
Microbiol.Mol. Biol. Rev.
, vol.75
, Issue.2
, pp. 286-300
-
-
Georg, J.1
Hess, W.R.2
-
23
-
-
70349462763
-
Evidence for a major role of antisense RNAs in cyanobacterial gene regulation
-
Georg, J., B. Voss, I. Scholz, J. Mitschke, A. Wilde et al., 2009 Evidence for a major role of antisense RNAs in cyanobacterial gene regulation. Mol. Syst. Biol. 5: 305.
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 305
-
-
Georg, J.1
Voss, B.2
Scholz, I.3
Mitschke, J.4
Wilde, A.5
-
24
-
-
67650434032
-
The Yfr2 ncRNA family, a group of abundant RNA molecules widely conserved in cyanobacteria
-
Gierga, G., B. Voss, and W. R. Hess, 2009 The Yfr2 ncRNA family, a group of abundant RNA molecules widely conserved in cyanobacteria. RNA Biol. 6(3): 222-227.
-
(2009)
RNA Biol
, vol.6
, Issue.3
, pp. 222-227
-
-
Gierga, G.1
Voss, B.2
Hess, W.R.3
-
25
-
-
84863987120
-
Non-coding RNAs in marine Synechococcus and their regulation under environmentally relevant stress conditions
-
Gierga, G., B. Voss, and W. R. Hess, 2012 Non-coding RNAs in marine Synechococcus and their regulation under environmentally relevant stress conditions. ISME J. 6(8): 1544-1557.
-
(2012)
ISME J
, vol.6
, Issue.8
, pp. 1544-1557
-
-
Gierga, G.1
Voss, B.2
Hess, W.R.3
-
26
-
-
0001240236
-
Organization and function of chlorophyll in membranes of cyanobacteria during iron starvation
-
Guikema, J. A., and L. A. Sherman, 1983 Organization and function of chlorophyll in membranes of cyanobacteria during iron starvation. Plant Physiol. 73(2): 250-256.
-
(1983)
Plant Physiol
, vol.73
, Issue.2
, pp. 250-256
-
-
Guikema, J.A.1
Sherman, L.A.2
-
27
-
-
0002359558
-
Influence of iron deprivation on the membrane composition of Anacystis nidulans
-
Guikema, J. A., and L. A. Sherman, 1984 Influence of iron deprivation on the membrane composition of Anacystis nidulans. Plant Physiol. 74(1): 90-95.
-
(1984)
Plant Physiol
, vol.74
, Issue.1
, pp. 90-95
-
-
Guikema, J.A.1
Sherman, L.A.2
-
28
-
-
0035069457
-
Iron and metal regulation in bacteria
-
Hantke, K., 2001 Iron and metal regulation in bacteria. Curr. Opin. Microbiol. 4(2): 172-177.
-
(2001)
Curr. Opin. Microbiol.
, vol.4
, Issue.2
, pp. 172-177
-
-
Hantke, K.1
-
29
-
-
79961098409
-
Quantifying the sequence-function relation in gene silencing by bacterial small RNAs
-
Hao, Y., Z. J. Zhang, D. W. Erickson, M. Huang, Y. Huang et al., 2011 Quantifying the sequence-function relation in gene silencing by bacterial small RNAs. Proc. Natl. Acad. Sci. USA 108(30): 12473-12478.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, Issue.30
, pp. 12473-12478
-
-
Hao, Y.1
Zhang, Z.J.2
Erickson, D.W.3
Huang, M.4
Huang, Y.5
-
30
-
-
78650462989
-
Identification of an RNase J ortholog in Sulfolobus solfataricus: implications for 59-to-39 directional decay and 59-end protection of mRNA in Crenarchaeota
-
Hasenohrl, D., R. Konrat, and U. Blasi, 2011 Identification of an RNase J ortholog in Sulfolobus solfataricus: implications for 59-to-39 directional decay and 59-end protection of mRNA in Crenarchaeota. RNA 17(1): 99-107.
-
(2011)
RNA
, vol.17
, Issue.1
, pp. 99-107
-
-
Hasenohrl, D.1
Konrat, R.2
Blasi, U.3
-
31
-
-
0037422403
-
Elimination of high-light-inducible polypeptides related to eukaryotic chlorophyll a/b-binding proteins results in aberrant photoacclimation in Synechocystis PCC6803
-
Havaux, M., G. Guedeney, Q. He, and A. R. Grossman, 2003 Elimination of high-light-inducible polypeptides related to eukaryotic chlorophyll a/b-binding proteins results in aberrant photoacclimation in Synechocystis PCC6803. Biochim. Biophys. Acta 1557(1-3): 21-33.
-
(2003)
Biochim. Biophys. Acta
, vol.1557
, Issue.1-3
, pp. 21-33
-
-
Havaux, M.1
Guedeney, G.2
He, Q.3
Grossman, A.R.4
-
32
-
-
28944440488
-
Identification of a furA cis antisense RNA in the cyanobacterium Anabaena sp.PCC 7120.
-
Hernandez, J. A., A. M. Muro-Pastor, E. Flores, M. T. Bes, M. L. Peleato et al., 2006 Identification of a furA cis antisense RNA in the cyanobacterium Anabaena sp. PCC 7120. J. Mol. Biol. 355(3): 325-334.
-
(2006)
J. Mol. Biol.
, vol.355
, Issue.3
, pp. 325-334
-
-
Hernandez, J.A.1
Muro-Pastor, A.M.2
Flores, E.3
Bes, M.T.4
Peleato, M.L.5
-
33
-
-
84873272026
-
CyanoEXpress: a web database for exploration and visualisation of the integrated transcriptome of cyanobacterium Synechocystis sp. PCC6803
-
Hernandez-Prieto, M. A., and M. E. Futschik, 2012 CyanoEXpress: a web database for exploration and visualisation of the integrated transcriptome of cyanobacterium Synechocystis sp. PCC6803. Bioinformation 8(13): 629-633.
-
(2012)
Bioinformation
, vol.8
, Issue.13
, pp. 629-633
-
-
Hernandez-Prieto, M.A.1
Futschik, M.E.2
-
34
-
-
0035037364
-
DNA microarray analysis of cyanobacterial gene expression during acclimation to high light
-
Hihara, Y., A. Kamei, M. Kanehisa, A. Kaplan, and M. Ikeuchi, 2001 DNA microarray analysis of cyanobacterial gene expression during acclimation to high light. Plant Cell 13(4): 793-806.
-
(2001)
Plant Cell
, vol.13
, Issue.4
, pp. 793-806
-
-
Hihara, Y.1
Kamei, A.2
Kanehisa, M.3
Kaplan, A.4
Ikeuchi, M.5
-
35
-
-
38049184229
-
Cadmium triggers an integrated reprogramming of the metabolism of Synechocystis PCC6803, under the control of the Slr1738 regulator
-
Houot, L., M. Floutier, B. Marteyn, M. Michaut, A. Picciocchi et al., 2007 Cadmium triggers an integrated reprogramming of the metabolism of Synechocystis PCC6803, under the control of the Slr1738 regulator. BMC Genomics 8: 350.
-
(2007)
BMC Genomics
, vol.8
, pp. 350
-
-
Houot, L.1
Floutier, M.2
Marteyn, B.3
Michaut, M.4
Picciocchi, A.5
-
36
-
-
0035050681
-
Genes essential to iron transport in the cyanobacterium Synechocystis sp
-
Katoh, H., N. Hagino, A. R. Grossman, and T. Ogawa, 2001 Genes essential to iron transport in the cyanobacterium Synechocystis sp. strain PCC 6803. J. Bacteriol. 183(9): 2779-2784.
-
(2001)
strain PCC 6803. J. Bacteriol.
, vol.183
, Issue.9
, pp. 2779-2784
-
-
Katoh, H.1
Hagino, N.2
Grossman, A.R.3
Ogawa, T.4
-
37
-
-
33750251527
-
Roles of the cyanobacterial isiABC operon in protection from oxidative and heat stresses
-
Kojima, K., T. Suzuki-Maenaka, T. Kikuchi, and H. Nakamoto, 2006 Roles of the cyanobacterial isiABC operon in protection from oxidative and heat stresses. Physiol. Plant. 128(3): 507-519.
-
(2006)
Physiol. Plant.
, vol.128
, Issue.3
, pp. 507-519
-
-
Kojima, K.1
Suzuki-Maenaka, T.2
Kikuchi, T.3
Nakamoto, H.4
-
38
-
-
34047266662
-
The structure of a cyanobacterial bicarbonate transport protein, CmpA
-
Koropatkin, N. M., D. W. Koppenaal, H. B. Pakrasi, and T. J. Smith, 2007 The structure of a cyanobacterial bicarbonate transport protein, CmpA. J. Biol. Chem. 282(4): 2606-2614.
-
(2007)
J. Biol. Chem.
, vol.282
, Issue.4
, pp. 2606-2614
-
-
Koropatkin, N.M.1
Koppenaal, D.W.2
Pakrasi, H.B.3
Smith, T.J.4
-
39
-
-
13444287770
-
Supercomplexes of IsiA and photosystem I in a mutant lacking subunit PsaL
-
Kouril, R., N. Yeremenko, S. D'Haene, G. T. Oostergetel, H. C. P. Matthijs et al., 2005 Supercomplexes of IsiA and photosystem I in a mutant lacking subunit PsaL. Biochim. Biophys. Acta. 1706(3): 262-266.
-
(2005)
Biochim.Biophys. Acta.
, vol.1706
, Issue.3
, pp. 262-266
-
-
Kouril, R.1
Yeremenko, N.2
aene S.D'3
Oostergetel, G.T.4
Matthijs, H.C.P.5
-
40
-
-
61349177268
-
Mfuzz: a software package for soft clustering of microarray data
-
Kumar, L., and M. E. Futschik, 2007 Mfuzz: a software package for soft clustering of microarray data. Bioinformation 2(1): 3.
-
(2007)
Bioinformation
, vol.2
, Issue.1
, pp. 3
-
-
Kumar, L.1
Futschik, M.E.2
-
41
-
-
0142258051
-
Repression by Fur is not the main mechanism controlling the iron-inducible isiAB operon in the cyanobacterium Synechocystis sp.PCC 6803
-
Kunert, A., J. Vinnemeier, N. Erdmann, and M. Hagemann, 2003 Repression by Fur is not the main mechanism controlling the iron-inducible isiAB operon in the cyanobacterium Synechocystis sp. PCC 6803. FEMS Microbiol. Lett. 227(2): 255-262.
-
(2003)
FEMS Microbiol. Lett.
, vol.227
, Issue.2
, pp. 255-262
-
-
Kunert, A.1
Vinnemeier, J.2
Erdmann, N.3
Hagemann, M.4
-
42
-
-
2442682940
-
Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp.strain PCC 6803
-
Li, H., A. K. Singh, L. M. McIntyre, and L. A. Sherman, 2004 Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803. J. Bacteriol. 186(11): 3331-3345.
-
(2004)
J. Bacteriol.
, vol.186
, Issue.11
, pp. 3331-3345
-
-
Li, H.1
Singh, A.K.2
McIntyre, L.M.3
Sherman, L.A.4
-
43
-
-
80955131872
-
Expression of fur and its antisense alpha-fur from Microcystis aeruginosa PCC7806 as response to light and oxidative stress
-
Martin-Luna, B., E. Sevilla, A. Gonzalez, M. T. Bes, M. F. Fillat et al., 2011 Expression of fur and its antisense alpha-fur from Microcystis aeruginosa PCC7806 as response to light and oxidative stress. J. Plant Physiol. 168(18): 2244-2250.
-
(2011)
J. Plant Physiol.
, vol.168
, Issue.18
, pp. 2244-2250
-
-
Martin-Luna, B.1
Sevilla, E.2
Gonzalez, A.3
Bes, M.T.4
Fillat, M.F.5
-
44
-
-
0037007078
-
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
-
Masse, E., and S. Gottesman, 2002 A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc. Natl. Acad. Sci. USA 99(7): 4620-4625.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.7
, pp. 4620-4625
-
-
Masse, E.1
Gottesman, S.2
-
45
-
-
26444505976
-
Effect of RyhB small RNA on global iron use in Escherichia coli
-
Masse, E., C. K. Vanderpool, and S. Gottesman, 2005 Effect of RyhB small RNA on global iron use in Escherichia coli. J. Bacteriol. 187(20): 6962-6971.
-
(2005)
J. Bacteriol.
, vol.187
, Issue.20
, pp. 6962-6971
-
-
Masse, E.1
Vanderpool, C.K.2
Gottesman, S.3
-
46
-
-
0043032822
-
Global iron-dependent gene regulation in Escherichia coli.A new mechanism for iron homeostasis
-
McHugh, J. P., F. Rodriguez-Quinones, H. Abdul-Tehrani, D. A. Svistunenko, R. K. Poole et al., 2003 Global iron-dependent gene regulation in Escherichia coli. A new mechanism for iron homeostasis. J. Biol. Chem. 278(32): 29478-29486.
-
(2003)
J. Biol. Chem.
, vol.278
, Issue.32
, pp. 29478-29486
-
-
McHugh, J.P.1
Rodriguez-Quinones, F.2
Abdul-Tehrani, H.3
Svistunenko, D.A.4
Poole, R.K.5
-
47
-
-
79952174199
-
An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp.PCC6803
-
Mitschke, J., J. Georg, I. Scholz, C. M. Sharma, D. Dienst et al., 2011a An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803. Proc. Natl. Acad. Sci. USA 108(5): 2124-2129.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, Issue.5
, pp. 2124-2129
-
-
Mitschke, J.1
Georg, J.2
Scholz, I.3
Sharma, C.M.4
Dienst, D.5
-
48
-
-
84055214198
-
Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp.PCC7120
-
Mitschke, J., A. Vioque, F. Haas, W. R. Hess, and A. M. Muro-Pastor, 2011b Dynamics of transcriptional start site selection during nitrogen stress-induced cell differentiation in Anabaena sp. PCC7120. Proc. Natl. Acad. Sci. USA 108(50): 20130-20135.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, Issue.50
, pp. 20130-20135
-
-
Mitschke, J.1
Vioque, A.2
Haas, F.3
Hess, W.R.4
Muro-Pastor, A.M.5
-
49
-
-
0035851149
-
Cyanobacteria perceive nitrogen status by sensing intracellular 2-oxoglutarate levels
-
Muro-Pastor, M. I., J. C. Reyes, and F. J. Florencio, 2001 Cyanobacteria perceive nitrogen status by sensing intracellular 2-oxoglutarate levels. J. Biol. Chem. 276(41): 38320-38328.
-
(2001)
J. Biol. Chem.
, vol.276
, Issue.41
, pp. 38320-38328
-
-
Muro-Pastor, M.I.1
Reyes, J.C.2
Florencio, F.J.3
-
50
-
-
34548758619
-
A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions
-
Nakamura, T., K. Naito, N. Yokota, C. Sugita, and M. Sugita, 2007 A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions. Plant Cell Physiol. 48(9): 1309-1318.
-
(2007)
Plant Cell Physiol
, vol.48
, Issue.9
, pp. 1309-1318
-
-
Nakamura, T.1
Naito, K.2
Yokota, N.3
Sugita, C.4
Sugita, M.5
-
51
-
-
77956375190
-
Recent advances in understanding the assembly and repair of photosystem II
-
Nixon, P. J., F. Michoux, J. Yu, M. Boehm, and J. Komenda, 2010 Recent advances in understanding the assembly and repair of photosystem II. Ann. Bot. (Lond.) 106(1): 1-16.
-
(2010)
Ann.Bot.(Lond.)
, vol.106
, Issue.1
, pp. 1-16
-
-
Nixon, P.J.1
Michoux, F.2
Yu, J.3
Boehm, M.4
Komenda, J.5
-
52
-
-
33845866349
-
Nitrogen induction of sugar catabolic gene expression in Synechocystis sp.PCC 6803
-
Osanai, T., S. Imamura, M. Asayama, M. Shirai, I. Suzuki et al., 2006 Nitrogen induction of sugar catabolic gene expression in Synechocystis sp. PCC 6803. DNA Res. 13(5): 185-195.
-
(2006)
DNA Res.
, vol.13
, Issue.5
, pp. 185-195
-
-
Osanai, T.1
Imamura, S.2
Asayama, M.3
Shirai, M.4
Suzuki, I.5
-
53
-
-
33746455962
-
Structural changes of Escherichia coli ferric uptake regulator during metal-dependent dimerization and activation explored by NMR and X-ray crystallography
-
Pecqueur, L., B. D'Autréaux, J. Dupuy, Y. Nicolet, L. Jacquamet et al., 2006 Structural changes of Escherichia coli ferric uptake regulator during metal-dependent dimerization and activation explored by NMR and X-ray crystallography. J. Biol. Chem. 281(30): 21286-21295.
-
(2006)
J. Biol. Chem.
, vol.281
, Issue.30
, pp. 21286-21295
-
-
Pecqueur, L.1
D'Autréaux, B.2
Dupuy, J.3
Nicolet, Y.4
Jacquamet, L.5
-
54
-
-
69049106519
-
Analysis of current and alternative phenol-based RNA extraction methodologies for cyanobacteria
-
Pinto, F. L., A. Thapper, W. Sontheim, and P. Lindblad, 2009 Analysis of current and alternative phenol-based RNA extraction methodologies for cyanobacteria. BMC Mol. Biol. 10: 79.
-
(2009)
BMC Mol. Biol.
, vol.10
, pp. 79
-
-
Pinto, F.L.1
Thapper, A.2
Sontheim, W.3
Lindblad, P.4
-
55
-
-
3142653751
-
Subunit composition of NDH-1 complexes of Synechocystis sp. PCC 6803.
-
Prommeenate, P., A. M. Lennon, C. Markert, M. Hippler, and P. J. Nixon, 2004 Subunit composition of NDH-1 complexes of Synechocystis sp. PCC 6803. J. Biol. Chem. 279(27): 28165-28173.
-
(2004)
J. Biol. Chem.
, vol.279
, Issue.27
, pp. 28165-28173
-
-
Prommeenate, P.1
Lennon, A.M.2
Markert, C.3
Hippler, M.4
Nixon, P.J.5
-
56
-
-
9444225935
-
Java Treeview-extensible visualization of microarray data
-
Saldanha, A. J., 2004 Java Treeview-extensible visualization of microarray data. Bioinformatics 20(17): 3246-3248.
-
(2004)
Bioinformatics
, vol.20
, Issue.17
, pp. 3246-3248
-
-
Saldanha, A.J.1
-
57
-
-
84861442326
-
Regulating iron storage and metabolism with RNA: an overview of posttranscriptional controls of intracellular iron homeostasis
-
Salvail, H., and E. Masse, 2012 Regulating iron storage and metabolism with RNA: an overview of posttranscriptional controls of intracellular iron homeostasis. Wiley Interdiscip Rev RNA 3(1): 26-36.
-
(2012)
Wiley Interdiscip Rev RNA
, vol.3
, Issue.1
, pp. 26-36
-
-
Salvail, H.1
Masse, E.2
-
58
-
-
78149241880
-
A simple and fast method to determine the parameters for fuzzy c-means cluster analysis
-
Schwammle, V., and O. N. Jensen, 2010 A simple and fast method to determine the parameters for fuzzy c-means cluster analysis. Bioinformatics 26(22): 2841-2848.
-
(2010)
Bioinformatics
, vol.26
, Issue.22
, pp. 2841-2848
-
-
Schwammle, V.1
Jensen, O.N.2
-
59
-
-
80955142835
-
Identification of three new antisense RNAs in the fur locus from unicellular cyanobacteria
-
Sevilla, E., B. Martín-Luna, A. González, J. A. Gonzalo-Asensio, M.-L. Peleato et al., 2011 Identification of three new antisense RNAs in the fur locus from unicellular cyanobacteria. Microbiology. 157: 3398-3404.
-
(2011)
Microbiology
, vol.157
, pp. 3398-3404
-
-
Sevilla, E.1
Martín-Luna, B.2
González, A.3
Gonzalo-Asensio, J.A.4
Peleato, M.L.5
-
60
-
-
81755162780
-
Chloroplast RNase J compensates for inefficient transcription termination by removal of antisense RNA
-
Sharwood, R. E., M. Halpert, S. Luro, G. Schuster, and D. B. Stern, 2011 Chloroplast RNase J compensates for inefficient transcription termination by removal of antisense RNA. RNA 17(12): 2165-2176.
-
(2011)
RNA
, vol.17
, Issue.12
, pp. 2165-2176
-
-
Sharwood, R.E.1
Halpert, M.2
Luro, S.3
Schuster, G.4
Stern, D.B.5
-
61
-
-
34249778665
-
A role for mrgA, a DPS family protein, in the internal transport of Fe in the cyanobacterium Synechocystis sp. PCC6803
-
Shcolnick, S., Y. Shaked, and N. Keren, 2007 A role for mrgA, a DPS family protein, in the internal transport of Fe in the cyanobacterium Synechocystis sp. PCC6803. Biochim. Biophys. Acta 1767(6): 814-819.
-
(2007)
Biochim. Biophys. Acta
, vol.1767
, Issue.6
, pp. 814-819
-
-
Shcolnick, S.1
Shaked, Y.2
Keren, N.3
-
62
-
-
68249143313
-
The mechanism of iron homeostasis in the unicellular cyanobacterium Synechocystis sp.PCC 6803 and its relationship to oxidative stress
-
Shcolnick, S., T. C. Summerfield, L. Reytman, L. A. Sherman, and N. Keren, 2009 The mechanism of iron homeostasis in the unicellular cyanobacterium Synechocystis sp. PCC 6803 and its relationship to oxidative stress. Plant Physiol. 150(4): 2045-2056.
-
(2009)
Plant Physiol.
, vol.150
, Issue.4
, pp. 2045-2056
-
-
Shcolnick, S.1
Summerfield, T.C.2
Reytman, L.3
Sherman, L.A.4
Keren, N.5
-
63
-
-
36148932962
-
SufR coordinates two [4Fe-4S]2+, 1+ clusters and functions as a transcriptional repressor of the sufBCDS operon and an autoregulator of sufR in cyanobacteria
-
Shen, G., R. Balasubramanian, T. Wang, Y. Wu, L. M. Hoffart et al., 2007 SufR coordinates two [4Fe-4S]2+, 1+ clusters and functions as a transcriptional repressor of the sufBCDS operon and an autoregulator of sufR in cyanobacteria. J. Biol. Chem. 282(44): 31909-31919.
-
(2007)
J. Biol. Chem.
, vol.282
, Issue.44
, pp. 31909-31919
-
-
Shen, G.1
Balasubramanian, R.2
Wang, T.3
Wu, Y.4
Hoffart, L.M.5
-
64
-
-
0042466180
-
Microarray analysis of the genome-wide response to iron deficiency and iron reconstitution in the cyanobacterium Synechocystis sp.PCC 6803.
-
Singh, A. K., L. M. McIntyre, and L. A. Sherman, 2003 Microarray analysis of the genome-wide response to iron deficiency and iron reconstitution in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol. 132(4): 1825-1839.
-
(2003)
Plant Physiol.
, vol.132
, Issue.4
, pp. 1825-1839
-
-
Singh, A.K.1
McIntyre, L.M.2
Sherman, L.A.3
-
65
-
-
33644872577
-
-
Limma: linear models for microarray data, Bioinformatics and Computational Biology Solutions using R and Bioconductor, edited by R. Gentleman, V. Carey, S. Dudoit, R. Irizarry, and W. Huber. Springer, New York
-
Smyth, G. K., 2005 Limma: linear models for microarray data, pp. 397-420 in Bioinformatics and Computational Biology Solutions using R and Bioconductor, edited by R. Gentleman, V. Carey, S. Dudoit, R. Irizarry, and W. Huber. Springer, New York.
-
(2005)
, pp. 397-420
-
-
Smyth, G.K.1
-
66
-
-
0037123632
-
An expanding universe of noncoding RNAs
-
Storz, G., 2002 An expanding universe of noncoding RNAs. Science 296(5571): 1260-1263.
-
(2002)
Science
, vol.296
, Issue.5571
, pp. 1260-1263
-
-
Storz, G.1
-
67
-
-
77953171199
-
Structure of Stenotrophomonas maltophilia FeoA complexed with zinc: a unique prokaryotic SH3-domain protein that possibly acts as a bacterial ferrous iron-transport activating factor
-
Su, Y.-C., K.-H. Chin, H.-C. Hung, G.-H. Shen, A. H.-J. Wang et al., 2010 Structure of Stenotrophomonas maltophilia FeoA complexed with zinc: a unique prokaryotic SH3-domain protein that possibly acts as a bacterial ferrous iron-transport activating factor. Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 66(6): 636-642.
-
(2010)
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.
, vol.66
, Issue.6
, pp. 636-642
-
-
Su, Y.C.1
Chin, K.H.2
Hung, H.C.3
Shen, G.H.4
Wang, A.H.J.5
-
68
-
-
80052964737
-
Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability
-
Thompson, A. W., K. Huang, M. A. Saito, and S. W. Chisholm, 2011 Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability. ISME J. 5(10): 1580-1594.
-
(2011)
ISME J
, vol.5
, Issue.10
, pp. 1580-1594
-
-
Thompson, A.W.1
Huang, K.2
Saito, M.A.3
Chisholm, S.W.4
-
69
-
-
84855992860
-
Cyanobacterial metallochaperone inhibits deleterious side reactions of copper
-
Tottey, S., C. J. Patterson, L. Banci, I. Bertini, I. C. Felli et al., 2012 Cyanobacterial metallochaperone inhibits deleterious side reactions of copper. Proc. Natl. Acad. Sci. USA 109(1): 95-100.
-
(2012)
Proc.Natl. Acad. Sci. USA
, vol.109
, Issue.1
, pp. 95-100
-
-
Tottey, S.1
Patterson, C.J.2
Banci, L.3
Bertini, I.4
Felli, I.C.5
-
70
-
-
1242339627
-
Alterations in global patterns of gene expression in Synechocystis sp.PCC 6803 in response to inorganic carbon limitation and the inactivation of ndhR, a LysR family regulator
-
Wang, H.-L., B. L. Postier, and R. L. Burnap, 2004 Alterations in global patterns of gene expression in Synechocystis sp. PCC 6803 in response to inorganic carbon limitation and the inactivation of ndhR, a LysR family regulator. J. Biol. Chem. 279(7): 5739-5751.
-
(2004)
J. Biol. Chem.
, vol.279
, Issue.7
, pp. 5739-5751
-
-
Wang, H.L.1
Postier, B.L.2
Burnap, R.L.3
-
71
-
-
0035395606
-
Identification of novel small RNAs using comparative genomics and microarrays
-
Wassarman, K. M., F. Repoila, C. Rosenow, G. Storz, and S. Gottesman, 2001 Identification of novel small RNAs using comparative genomics and microarrays. Genes Dev. 15(13): 1637-1651.
-
(2001)
Genes Dev
, vol.15
, Issue.13
, pp. 1637-1651
-
-
Wassarman, K.M.1
Repoila, F.2
Rosenow, C.3
Storz, G.4
Gottesman, S.5
-
72
-
-
55549129958
-
High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex
-
Wegener, K. M., E. A. Welsh, L. E. Thornton, N. Keren, J. M. Jacobs et al., 2008 High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex. J. Biol. Chem. 283(41): 27829-27837.
-
(2008)
J. Biol. Chem.
, vol.283
, Issue.41
, pp. 27829-27837
-
-
Wegener, K.M.1
Welsh, E.A.2
Thornton, L.E.3
Keren, N.4
Jacobs, J.M.5
-
73
-
-
3042840984
-
Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis
-
Wilderman, P. J., N. A. Sowa, D. J. FitzGerald, P. C. FitzGerald, S. Gottesman et al., 2004 Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis. Proc. Natl. Acad. Sci. USA 101(26): 9792-9797.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, Issue.26
, pp. 9792-9797
-
-
Wilderman, P.J.1
Sowa, N.A.2
FitzGerald, D.J.3
FitzGerald, P.C.4
Gottesman, S.5
-
74
-
-
65449190158
-
Flavodiiron proteins in oxygenic photosynthetic organisms: photoprotection of photosystem II by Flv2 and Flv4 in Synechocystis sp.PCC 6803.
-
Zhang, P., Y. Allahverdiyeva, M. Eisenhut, and E. M. Aro, 2009 Flavodiiron proteins in oxygenic photosynthetic organisms: photoprotection of photosystem II by Flv2 and Flv4 in Synechocystis sp. PCC 6803. PLoS ONE 4 (4): e5331.
-
(2009)
PLoS ONE.
, vol.4
, Issue.4
-
-
Zhang, P.1
Allahverdiyeva, Y.2
Eisenhut, M.3
Aro, E.M.4
-
75
-
-
84863321262
-
Operon flv4-flv2 provides cyanobacterial photosystem II with flexibility of electron transfer
-
Zhang, P., M. Eisenhut, A. M. Brandt, D. Carmel, H. M. Silen et al., 2012 Operon flv4-flv2 provides cyanobacterial photosystem II with flexibility of electron transfer. Plant Cell 24(5): 1952-1971.
-
(2012)
Plant Cell
, vol.24
, Issue.5
, pp. 1952-1971
-
-
Zhang, P.1
Eisenhut, M.2
Brandt, A.M.3
Carmel, D.4
Silen, H.M.5
|