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Volumn 31, Issue 6, 2013, Pages 986-991

Engineering of transcriptional regulators enhances microbial stress tolerance

Author keywords

Artificial regulator; Global regulator; Regulator engineering; Regulators; Sigma factor; Stress tolerance; Synthetic biology; Zinc finger

Indexed keywords

ARTIFICIAL REGULATOR; GLOBAL REGULATORS; SIGMA FACTOR; STRESS TOLERANCE; SYNTHETIC BIOLOGY; ZINC FINGER;

EID: 84882565642     PISSN: 07349750     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biotechadv.2013.02.010     Document Type: Review
Times cited : (73)

References (74)
  • 1
    • 33845442201 scopus 로고    scopus 로고
    • Engineering yeast transcription machinery for improved ethanol tolerance and production
    • Alper H., Moxley J., Nevoigt E., Fink G.R., Stephanopoulos G. Engineering yeast transcription machinery for improved ethanol tolerance and production. Science 2006, 314:1565-1568.
    • (2006) Science , vol.314 , pp. 1565-1568
    • Alper, H.1    Moxley, J.2    Nevoigt, E.3    Fink, G.R.4    Stephanopoulos, G.5
  • 2
    • 38049001166 scopus 로고    scopus 로고
    • Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
    • Atsumi S., Hanai T., Liao J.C. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 2008, 451:86-89.
    • (2008) Nature , vol.451 , pp. 86-89
    • Atsumi, S.1    Hanai, T.2    Liao, J.C.3
  • 3
    • 0031454272 scopus 로고    scopus 로고
    • Stress tolerance: the key to effective strains of industrial baker's yeast
    • Attfield P.V. Stress tolerance: the key to effective strains of industrial baker's yeast. Nat Biotechnol 1997, 15:1351-1357.
    • (1997) Nat Biotechnol , vol.15 , pp. 1351-1357
    • Attfield, P.V.1
  • 5
    • 0037440734 scopus 로고    scopus 로고
    • Evolution of transcription factors and the gene regulatory network in Escherichia coli
    • Babu M.M., Teichmann S.A. Evolution of transcription factors and the gene regulatory network in Escherichia coli. Nucleic Acids Res 2003, 31:1234-1244.
    • (2003) Nucleic Acids Res , vol.31 , pp. 1234-1244
    • Babu, M.M.1    Teichmann, S.A.2
  • 6
    • 0001441208 scopus 로고
    • Effect of butanol challenge and temperature on lipid composition and membrane fluidity of butanol-tolerant Clostridium acetobutylicum
    • Baer S.H., Blaschek H.P., Smith T.L. Effect of butanol challenge and temperature on lipid composition and membrane fluidity of butanol-tolerant Clostridium acetobutylicum. Appl Environ Microbiol 1987, 53:2854-2861.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 2854-2861
    • Baer, S.H.1    Blaschek, H.P.2    Smith, T.L.3
  • 7
    • 70350550168 scopus 로고    scopus 로고
    • Mutants of the pentose-fermenting yeast Pichia stipitis with improved tolerance to inhibitors in hardwood spent sulfite liquor
    • Bajwa P.K., Shireen T., D'Aoust F., Pinel D., Martin V.J.J., Trevors J.T., et al. Mutants of the pentose-fermenting yeast Pichia stipitis with improved tolerance to inhibitors in hardwood spent sulfite liquor. Biotechnol Bioeng 2009, 104:892-900.
    • (2009) Biotechnol Bioeng , vol.104 , pp. 892-900
    • Bajwa, P.K.1    Shireen, T.2    D'Aoust, F.3    Pinel, D.4    Martin, V.J.J.5    Trevors, J.T.6
  • 8
    • 84871318613 scopus 로고    scopus 로고
    • Enhancing E. coli tolerance towards oxidative stress via engineering its global regulator cAMP receptor protein (CRP)
    • Basak S., Jiang R.R. Enhancing E. coli tolerance towards oxidative stress via engineering its global regulator cAMP receptor protein (CRP). PLoS One 2012, 7:e51179.
    • (2012) PLoS One , vol.7
    • Basak, S.1    Jiang, R.R.2
  • 9
    • 34248196414 scopus 로고    scopus 로고
    • Dynamics of genomic-library enrichment and identification of solvent tolerance genes for Clostfidium acetobutylicum
    • Borden J.R., Papoutsakis E.T. Dynamics of genomic-library enrichment and identification of solvent tolerance genes for Clostfidium acetobutylicum. Appl Environ Microbiol 2007, 73:3061-3068.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 3061-3068
    • Borden, J.R.1    Papoutsakis, E.T.2
  • 10
    • 1842591130 scopus 로고    scopus 로고
    • The regulation of bacterial transcription initiation
    • Browning D.F., Busby S.J.W. The regulation of bacterial transcription initiation. Nat Rev Microbiol 2004, 2:57-65.
    • (2004) Nat Rev Microbiol , vol.2 , pp. 57-65
    • Browning, D.F.1    Busby, S.J.W.2
  • 11
    • 0036203066 scopus 로고    scopus 로고
    • Structure of the bacterial RNA polymerase promoter specificity sigma subunit
    • Campbell E.A., Muzzin O., Chlenov M., Sun J.L., Olson C.A., Weinman O., et al. Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol Cell 2002, 9:527-539.
    • (2002) Mol Cell , vol.9 , pp. 527-539
    • Campbell, E.A.1    Muzzin, O.2    Chlenov, M.3    Sun, J.L.4    Olson, C.A.5    Weinman, O.6
  • 12
    • 79251567415 scopus 로고    scopus 로고
    • Laboratory-evolved mutants of an exogenous global regulator, IrrE from Deinococcus radiodurans, enhance stress tolerances of Escherichia coli
    • Chen T.J., Wang J.Q., Yang R., Li J.C., Lin M., Lin Z.L. Laboratory-evolved mutants of an exogenous global regulator, IrrE from Deinococcus radiodurans, enhance stress tolerances of Escherichia coli. PLoS One 2011, 6:e16228.
    • (2011) PLoS One , vol.6
    • Chen, T.J.1    Wang, J.Q.2    Yang, R.3    Li, J.C.4    Lin, M.5    Lin, Z.L.6
  • 13
    • 84863628095 scopus 로고    scopus 로고
    • Significant rewiring of the transcriptome and proteome of an Escherichia coli strain harboring a tailored exogenous global regulator IrrE
    • Chen T.J., Wang J.Q., Zeng L.L., Li R.Z., Li J.C., Chen Y.L., et al. Significant rewiring of the transcriptome and proteome of an Escherichia coli strain harboring a tailored exogenous global regulator IrrE. PLoS One 2012, 7:e37126.
    • (2012) PLoS One , vol.7
    • Chen, T.J.1    Wang, J.Q.2    Zeng, L.L.3    Li, R.Z.4    Li, J.C.5    Chen, Y.L.6
  • 14
    • 39749104182 scopus 로고    scopus 로고
    • Engineering Escherichia coli heat-resistance by synthetic gene amplification
    • Christ D., Chin J.W. Engineering Escherichia coli heat-resistance by synthetic gene amplification. Protein Eng Des Sel 2008, 21:121-125.
    • (2008) Protein Eng Des Sel , vol.21 , pp. 121-125
    • Christ, D.1    Chin, J.W.2
  • 15
    • 36849012047 scopus 로고    scopus 로고
    • Mutations in two global regulators lower individual mortality in Escherichia coli
    • Fontaine F., Stewart E.J., Lindner A.B., Taddei F. Mutations in two global regulators lower individual mortality in Escherichia coli. Mol Microbiol 2008, 67:2-14.
    • (2008) Mol Microbiol , vol.67 , pp. 2-14
    • Fontaine, F.1    Stewart, E.J.2    Lindner, A.B.3    Taddei, F.4
  • 16
    • 0345293207 scopus 로고    scopus 로고
    • Expression of Deinococcus radiodurans PprI enhances the radioresistance of Escherichia coli
    • Gao G.J., Tian B., Liu L.L., Sheng D.H., Shen B.H., Hua Y.J. Expression of Deinococcus radiodurans PprI enhances the radioresistance of Escherichia coli. DNA Repair 2003, 2:1419-1427.
    • (2003) DNA Repair , vol.2 , pp. 1419-1427
    • Gao, G.J.1    Tian, B.2    Liu, L.L.3    Sheng, D.H.4    Shen, B.H.5    Hua, Y.J.6
  • 17
    • 0024355282 scopus 로고
    • A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity
    • Gardella T., Moyle H., Susskind M.M. A mutant Escherichia coli sigma 70 subunit of RNA polymerase with altered promoter specificity. J Mol Biol 1989, 206:579-590.
    • (1989) J Mol Biol , vol.206 , pp. 579-590
    • Gardella, T.1    Moyle, H.2    Susskind, M.M.3
  • 18
    • 0033637153 scopus 로고    scopus 로고
    • Genomic expression programs in the response of yeast cells to environmental changes
    • Gasch A.P., Spellman P.T., Kao C.M., Carmel-Harel O., Eisen M.B., Storz G., et al. Genomic expression programs in the response of yeast cells to environmental changes. Mol Biol Cell 2000, 11:4241-4257.
    • (2000) Mol Biol Cell , vol.11 , pp. 4241-4257
    • Gasch, A.P.1    Spellman, P.T.2    Kao, C.M.3    Carmel-Harel, O.4    Eisen, M.B.5    Storz, G.6
  • 19
    • 78650824815 scopus 로고    scopus 로고
    • Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160
    • Geddes C.C., Mullinnix M.T., Nieves I.U., Peterson J.J., Hoffman R.W., York S.W., et al. Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160. Bioresour Technol 2011, 102:2702-2711.
    • (2011) Bioresour Technol , vol.102 , pp. 2702-2711
    • Geddes, C.C.1    Mullinnix, M.T.2    Nieves, I.U.3    Peterson, J.J.4    Hoffman, R.W.5    York, S.W.6
  • 20
    • 0242692671 scopus 로고    scopus 로고
    • Multiple sigma subunits and the partitioning of bacterial transcription space
    • Gruber T.M., Gross C.A. Multiple sigma subunits and the partitioning of bacterial transcription space. Annu Rev Microbiol 2003, 57:441-466.
    • (2003) Annu Rev Microbiol , vol.57 , pp. 441-466
    • Gruber, T.M.1    Gross, C.A.2
  • 21
    • 2542428546 scopus 로고    scopus 로고
    • Structure and mechanism of the RNA polymerase II transcription machinery
    • Hahn S. Structure and mechanism of the RNA polymerase II transcription machinery. Nat Struct Mol Biol 2004, 11:394-403.
    • (2004) Nat Struct Mol Biol , vol.11 , pp. 394-403
    • Hahn, S.1
  • 23
    • 0038367597 scopus 로고    scopus 로고
    • Analysis of organic solvent tolerance in Escherichia coli using gene expression profiles from DNA microarrays
    • Hayashi S., Aono R., Hanai T., Mori H., Kobayashi T., Honda H. Analysis of organic solvent tolerance in Escherichia coli using gene expression profiles from DNA microarrays. J Biosci Bioeng 2003, 95:379-383.
    • (2003) J Biosci Bioeng , vol.95 , pp. 379-383
    • Hayashi, S.1    Aono, R.2    Hanai, T.3    Mori, H.4    Kobayashi, T.5    Honda, H.6
  • 24
    • 0037336180 scopus 로고    scopus 로고
    • Comprehensive studies of drug resistance mediated by overexpression of response regulators of two-component signal transduction systems in Escherichia coli
    • Hirakawa H., Nishino K., Hirata T., Yamaguchi A. Comprehensive studies of drug resistance mediated by overexpression of response regulators of two-component signal transduction systems in Escherichia coli. J Bacteriol 2003, 185:1851-1856.
    • (2003) J Bacteriol , vol.185 , pp. 1851-1856
    • Hirakawa, H.1    Nishino, K.2    Hirata, T.3    Yamaguchi, A.4
  • 25
    • 0141928573 scopus 로고    scopus 로고
    • Beta-Lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli
    • Hirakawa H., Nishino K., Yamada J., Hirata T., Yamaguchi A. beta-Lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli. J Antimicrob Chemother 2003, 52:576-582.
    • (2003) J Antimicrob Chemother , vol.52 , pp. 576-582
    • Hirakawa, H.1    Nishino, K.2    Yamada, J.3    Hirata, T.4    Yamaguchi, A.5
  • 26
    • 0037532675 scopus 로고    scopus 로고
    • PprI: a general switch responsible for extreme radioresistance of Deinococcus radiodurans
    • Hua Y.J., Narumi I., Gao G.J., Tian B., Satoh K., Kitayama S., et al. PprI: a general switch responsible for extreme radioresistance of Deinococcus radiodurans. Biochem Biophys Res Commun 2003, 306:354-360.
    • (2003) Biochem Biophys Res Commun , vol.306 , pp. 354-360
    • Hua, Y.J.1    Narumi, I.2    Gao, G.J.3    Tian, B.4    Satoh, K.5    Kitayama, S.6
  • 27
    • 77955141792 scopus 로고    scopus 로고
    • Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks
    • Ishihama A. Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks. FEMS Microbiol Rev 2010, 34:628-645.
    • (2010) FEMS Microbiol Rev , vol.34 , pp. 628-645
    • Ishihama, A.1
  • 28
    • 0035003619 scopus 로고    scopus 로고
    • Preparation of an organic solvent-tolerant strain from baker's yeast
    • Kawamoto T., Kanda T., Tanaka A. Preparation of an organic solvent-tolerant strain from baker's yeast. Appl Microbiol Biotechnol 2001, 55:476-479.
    • (2001) Appl Microbiol Biotechnol , vol.55 , pp. 476-479
    • Kawamoto, T.1    Kanda, T.2    Tanaka, A.3
  • 29
    • 84864634066 scopus 로고    scopus 로고
    • A synthetic biology framework for programming eukaryotic transcription functions
    • Khalil A.S., Lu T.K., Bashor C.J., Ramirez C.L., Pyenson N.C., Joung J.K., et al. A synthetic biology framework for programming eukaryotic transcription functions. Cell 2012, 150:647-658.
    • (2012) Cell , vol.150 , pp. 647-658
    • Khalil, A.S.1    Lu, T.K.2    Bashor, C.J.3    Ramirez, C.L.4    Pyenson, N.C.5    Joung, J.K.6
  • 30
    • 77249102724 scopus 로고    scopus 로고
    • Transcriptional effects of CRP* expression in Escherichia coli
    • Khankal R., Chin J.W., Ghosh D., Cirino P.C. Transcriptional effects of CRP* expression in Escherichia coli. J Biol Eng 2009, 3:13.
    • (2009) J Biol Eng , vol.3 , pp. 13
    • Khankal, R.1    Chin, J.W.2    Ghosh, D.3    Cirino, P.C.4
  • 31
    • 40649093316 scopus 로고    scopus 로고
    • Assessing the potential of mutational strategies to elicit new phenotypes in industrial strains
    • Klein-Marcuschamer D., Stephanopoulos G. Assessing the potential of mutational strategies to elicit new phenotypes in industrial strains. Proc Natl Acad Sci U S A 2008, 105:2319-2324.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 2319-2324
    • Klein-Marcuschamer, D.1    Stephanopoulos, G.2
  • 32
    • 52649115929 scopus 로고    scopus 로고
    • Phenotypic engineering by reprogramming gene transcription using novel artificial transcription factors in Escherichia coli
    • Lee J.Y., Sung B.H., Yu B.J., Lee J.H., Lee S.H., Kim M.S., et al. Phenotypic engineering by reprogramming gene transcription using novel artificial transcription factors in Escherichia coli. Nucleic Acids Res 2008, 36:e102.
    • (2008) Nucleic Acids Res , vol.36
    • Lee, J.Y.1    Sung, B.H.2    Yu, B.J.3    Lee, J.H.4    Lee, S.H.5    Kim, M.S.6
  • 33
    • 79952589723 scopus 로고    scopus 로고
    • Engineering butanol-tolerance in Escherichia coli with artificial transcription factor libraries
    • Lee J.Y., Yang K.S., Jang S.A., Sung B.H., Kim S.C. Engineering butanol-tolerance in Escherichia coli with artificial transcription factor libraries. Biotechnol Bioeng 2011, 108:742-749.
    • (2011) Biotechnol Bioeng , vol.108 , pp. 742-749
    • Lee, J.Y.1    Yang, K.S.2    Jang, S.A.3    Sung, B.H.4    Kim, S.C.5
  • 35
    • 84855821920 scopus 로고    scopus 로고
    • DNA binding is essential for PprI function in response to radiation damage in Deinococcus radiodurans
    • Lu H.M., Chen H., Xu G.Z., Miraj-Ul-Hussain Shah A., Hua Y.J. DNA binding is essential for PprI function in response to radiation damage in Deinococcus radiodurans. DNA Repair 2012, 11:139-145.
    • (2012) DNA Repair , vol.11 , pp. 139-145
    • Lu, H.M.1    Chen, H.2    Xu, G.Z.3    Miraj-Ul-Hussain Shah, A.4    Hua, Y.J.5
  • 36
    • 13544269611 scopus 로고    scopus 로고
    • An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs
    • Ma H.W., Kumar B., Ditges U., Gunzer F., Buer J., Zeng A.P. An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs. Nucleic Acids Res 2004, 32:6643-6649.
    • (2004) Nucleic Acids Res , vol.32 , pp. 6643-6649
    • Ma, H.W.1    Kumar, B.2    Ditges, U.3    Gunzer, F.4    Buer, J.5    Zeng, A.P.6
  • 37
    • 79151472749 scopus 로고    scopus 로고
    • Improved osmotic tolerance and ethanol production of ethanologenic Escherichia coli by IrrE, a flobal regulator of radiation-resistance of Deinococcus radiodurans
    • Ma R.Q., Zhang Y., Hong H.Z., Lu W., Lin M., Chen M., et al. Improved osmotic tolerance and ethanol production of ethanologenic Escherichia coli by IrrE, a flobal regulator of radiation-resistance of Deinococcus radiodurans. Curr Microbiol 2011, 62:659-664.
    • (2011) Curr Microbiol , vol.62 , pp. 659-664
    • Ma, R.Q.1    Zhang, Y.2    Hong, H.Z.3    Lu, W.4    Lin, M.5    Chen, M.6
  • 38
    • 84867286766 scopus 로고    scopus 로고
    • Engineering of Rhodococcus cell catalysts for tolerance improvement by sigma factor mutation and active plasmid partition
    • Ma Y.C., Yu H.M. Engineering of Rhodococcus cell catalysts for tolerance improvement by sigma factor mutation and active plasmid partition. J Ind Microbiol Biotechnol 2012, 39:1421-1430.
    • (2012) J Ind Microbiol Biotechnol , vol.39 , pp. 1421-1430
    • Ma, Y.C.1    Yu, H.M.2
  • 39
    • 0242386460 scopus 로고    scopus 로고
    • Identifying global regulators in transcriptional regulatory networks in bacteria
    • Martinez-Antonio A., Collado-Vides J. Identifying global regulators in transcriptional regulatory networks in bacteria. Curr Opin Microbiol 2003, 6:482-489.
    • (2003) Curr Opin Microbiol , vol.6 , pp. 482-489
    • Martinez-Antonio, A.1    Collado-Vides, J.2
  • 40
    • 0036843687 scopus 로고    scopus 로고
    • Escherichia coli gene expression responsive to levels of the response regulator EvgA
    • Masuda N., Church G.M. Escherichia coli gene expression responsive to levels of the response regulator EvgA. J Bacteriol 2002, 184:6225-6234.
    • (2002) J Bacteriol , vol.184 , pp. 6225-6234
    • Masuda, N.1    Church, G.M.2
  • 41
    • 0038349356 scopus 로고    scopus 로고
    • Regulatory network of acid resistance genes in Escherichia coli
    • Masuda N., Church G.M. Regulatory network of acid resistance genes in Escherichia coli. Mol Microbiol 2003, 48:699-712.
    • (2003) Mol Microbiol , vol.48 , pp. 699-712
    • Masuda, N.1    Church, G.M.2
  • 42
    • 46949110766 scopus 로고    scopus 로고
    • Discovery of a modified transcription factor endowing yeasts with organic-solvent tolerance and reconstruction of an organic-solvent-tolerant Saccharomyces cerevisiae strain
    • Matsui K., Teranishi S., Kamon S., Kuroda K., Ueda M. Discovery of a modified transcription factor endowing yeasts with organic-solvent tolerance and reconstruction of an organic-solvent-tolerant Saccharomyces cerevisiae strain. Appl Environ Microbiol 2008, 74:4222-4225.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 4222-4225
    • Matsui, K.1    Teranishi, S.2    Kamon, S.3    Kuroda, K.4    Ueda, M.5
  • 43
    • 27744589294 scopus 로고    scopus 로고
    • A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigma(S) (RpoS) in E. coli
    • Mika F., Hengge R. A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigma(S) (RpoS) in E. coli. Genes Dev 2005, 19:2770-2781.
    • (2005) Genes Dev , vol.19 , pp. 2770-2781
    • Mika, F.1    Hengge, R.2
  • 44
  • 45
    • 77953022341 scopus 로고    scopus 로고
    • A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: from biofuels and chemicals, to biocatalysis and bioremediation
    • Nicolaou S.A., Gaida S.M., Papoutsakis E.T. A comparative view of metabolite and substrate stress and tolerance in microbial bioprocessing: from biofuels and chemicals, to biocatalysis and bioremediation. Metab Eng 2010, 12:307-331.
    • (2010) Metab Eng , vol.12 , pp. 307-331
    • Nicolaou, S.A.1    Gaida, S.M.2    Papoutsakis, E.T.3
  • 46
    • 43549090906 scopus 로고    scopus 로고
    • Effect of global transcriptional regulators related to carbohydrate metabolism on organic solvent tolerance in Escherichia coli
    • Okochi M., Kurimoto M., Shimizu K., Honda H. Effect of global transcriptional regulators related to carbohydrate metabolism on organic solvent tolerance in Escherichia coli. J Biosci Bioeng 2008, 105:389-394.
    • (2008) J Biosci Bioeng , vol.105 , pp. 389-394
    • Okochi, M.1    Kurimoto, M.2    Shimizu, K.3    Honda, H.4
  • 47
    • 0036033707 scopus 로고    scopus 로고
    • Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12
    • Oshima T., Aiba H., Masuda Y., Kanaya S., Sugiura M., Wanner B.L., et al. Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12. Mol Microbiol 2002, 46:281-291.
    • (2002) Mol Microbiol , vol.46 , pp. 281-291
    • Oshima, T.1    Aiba, H.2    Masuda, Y.3    Kanaya, S.4    Sugiura, M.5    Wanner, B.L.6
  • 48
    • 84887212559 scopus 로고    scopus 로고
    • IrrE, a global regulator of extreme radiation resistance in Deinococcus radiodurans, enhances salt tolerance in Escherichia coli and Brassica napus
    • Pan J., Wang J., Zhou Z.F., Yan Y.L., Zhang W., Lu W., et al. IrrE, a global regulator of extreme radiation resistance in Deinococcus radiodurans, enhances salt tolerance in Escherichia coli and Brassica napus. PLoS One 2009, 4:e4422.
    • (2009) PLoS One , vol.4
    • Pan, J.1    Wang, J.2    Zhou, Z.F.3    Yan, Y.L.4    Zhang, W.5    Lu, W.6
  • 49
    • 22544461606 scopus 로고    scopus 로고
    • Phenotypic alteration and target gene identification using combinatorial libraries of zinc finger proteins in prokaryotic cells
    • Park K.S., Jang Y.S., Lee H., Kim J.S. Phenotypic alteration and target gene identification using combinatorial libraries of zinc finger proteins in prokaryotic cells. J Bacteriol 2005, 187:5496-5499.
    • (2005) J Bacteriol , vol.187 , pp. 5496-5499
    • Park, K.S.1    Jang, Y.S.2    Lee, H.3    Kim, J.S.4
  • 50
    • 10744225041 scopus 로고    scopus 로고
    • Phenotypic alteration of eukaryotic cells using randomized libraries of artificial transcription factors
    • Park K.S., Lee D.K., Lee H., Lee Y., Jang Y.S., Kim Y.H., et al. Phenotypic alteration of eukaryotic cells using randomized libraries of artificial transcription factors. Nat Biotechnol 2003, 21:1208-1214.
    • (2003) Nat Biotechnol , vol.21 , pp. 1208-1214
    • Park, K.S.1    Lee, D.K.2    Lee, H.3    Lee, Y.4    Jang, Y.S.5    Kim, Y.H.6
  • 51
    • 38949178112 scopus 로고    scopus 로고
    • Engineering complex phenotypes in industrial strains
    • Patnaik R. Engineering complex phenotypes in industrial strains. Biotechnol Progr 2008, 24:38-47.
    • (2008) Biotechnol Progr , vol.24 , pp. 38-47
    • Patnaik, R.1
  • 52
    • 14644387541 scopus 로고    scopus 로고
    • Nitric oxide and nitrosative stress tolerance in bacteria
    • Poole R.K. Nitric oxide and nitrosative stress tolerance in bacteria. Biochem Soc Trans 2005, 33:176-180.
    • (2005) Biochem Soc Trans , vol.33 , pp. 176-180
    • Poole, R.K.1
  • 53
    • 0034595509 scopus 로고    scopus 로고
    • Transcription activation by the Escherichia coli cyclic AMP receptor protein: determinants within activating region 3
    • Rhodius V.A., Busby S.J.W. Transcription activation by the Escherichia coli cyclic AMP receptor protein: determinants within activating region 3. J Mol Biol 2000, 299:295-310.
    • (2000) J Mol Biol , vol.299 , pp. 295-310
    • Rhodius, V.A.1    Busby, S.J.W.2
  • 54
    • 0041625721 scopus 로고    scopus 로고
    • Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature
    • Riehle M.M., Bennett A.F., Lenski R.E., Long A.D. Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature. Physiol Genomics 2003, 14:47-58.
    • (2003) Physiol Genomics , vol.14 , pp. 47-58
    • Riehle, M.M.1    Bennett, A.F.2    Lenski, R.E.3    Long, A.D.4
  • 55
    • 12244256152 scopus 로고    scopus 로고
    • Regulation of gene expression in Arabidopsis thaliana by artificial zinc finger chimeras
    • Sanchez J.P., Ullman C., Moore M., Choo Y., Chua N.H. Regulation of gene expression in Arabidopsis thaliana by artificial zinc finger chimeras. Plant Cell Physiol 2002, 43:1465-1472.
    • (2002) Plant Cell Physiol , vol.43 , pp. 1465-1472
    • Sanchez, J.P.1    Ullman, C.2    Moore, M.3    Choo, Y.4    Chua, N.H.5
  • 56
    • 43049136820 scopus 로고    scopus 로고
    • Combinatorial engineering of microbes for optimizing cellular phenotype
    • Santos C.N.S., Stephanopoulos G. Combinatorial engineering of microbes for optimizing cellular phenotype. Curr Opin Chem Biol 2008, 12:168-176.
    • (2008) Curr Opin Chem Biol , vol.12 , pp. 168-176
    • Santos, C.N.S.1    Stephanopoulos, G.2
  • 57
    • 57649149334 scopus 로고    scopus 로고
    • Genome shuffling to improve thermotolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiae
    • Shi D.J., Wang C.L., Wang K.M. Genome shuffling to improve thermotolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiae. J Ind Microbiol Biotechnol 2009, 36:139-147.
    • (2009) J Ind Microbiol Biotechnol , vol.36 , pp. 139-147
    • Shi, D.J.1    Wang, C.L.2    Wang, K.M.3
  • 58
    • 77955592728 scopus 로고    scopus 로고
    • Environmental stress tolerance of yeast: importance in industrial uses and molecular mechanisms
    • Shima J., Ando A., Nakamura T. Environmental stress tolerance of yeast: importance in industrial uses and molecular mechanisms. J Jpn Soc Food Sci 2010, 57:225-231.
    • (2010) J Jpn Soc Food Sci , vol.57 , pp. 225-231
    • Shima, J.1    Ando, A.2    Nakamura, T.3
  • 59
    • 0024371540 scopus 로고
    • Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase
    • Siegele D.A., Hu J.C., Walter W.A., Gross C.A. Altered promoter recognition by mutant forms of the sigma 70 subunit of Escherichia coli RNA polymerase. J Mol Biol 1989, 206:591-603.
    • (1989) J Mol Biol , vol.206 , pp. 591-603
    • Siegele, D.A.1    Hu, J.C.2    Walter, W.A.3    Gross, C.A.4
  • 60
    • 0347296233 scopus 로고    scopus 로고
    • Controlling gene expression in plants using synthetic zinc finger transcription factors
    • Stege J.T., Guan X., Ho T., Beachy R.N., Barbas C.F. Controlling gene expression in plants using synthetic zinc finger transcription factors. Plant J 2002, 32:1077-1086.
    • (2002) Plant J , vol.32 , pp. 1077-1086
    • Stege, J.T.1    Guan, X.2    Ho, T.3    Beachy, R.N.4    Barbas, C.F.5
  • 61
    • 33847083318 scopus 로고    scopus 로고
    • Global transcription machinery engineering: a new approach for improving cellular phenotype
    • Stephanopoulos G., Alper H. Global transcription machinery engineering: a new approach for improving cellular phenotype. Metab Eng 2007, 9:258-267.
    • (2007) Metab Eng , vol.9 , pp. 258-267
    • Stephanopoulos, G.1    Alper, H.2
  • 62
    • 84868611282 scopus 로고    scopus 로고
    • Enhancement of acetic acid tolerance in Saccharomyces cerevisiae by overexpression of the HAA1 gene, encoding a transcriptional activator
    • Tanaka K., Ishii Y., Ogawa J., Shima J. Enhancement of acetic acid tolerance in Saccharomyces cerevisiae by overexpression of the HAA1 gene, encoding a transcriptional activator. Appl Environ Microbiol 2012, 78:8161-8163.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 8161-8163
    • Tanaka, K.1    Ishii, Y.2    Ogawa, J.3    Shima, J.4
  • 63
    • 1642396325 scopus 로고    scopus 로고
    • Transcriptional analysis of butanol stress and tolerance in Clostridium acetobutylicum
    • Tomas C.A., Beamish J., Papoutsakis E.T. Transcriptional analysis of butanol stress and tolerance in Clostridium acetobutylicum. J Bacteriol 2004, 186:2006-2018.
    • (2004) J Bacteriol , vol.186 , pp. 2006-2018
    • Tomas, C.A.1    Beamish, J.2    Papoutsakis, E.T.3
  • 64
    • 59649088255 scopus 로고    scopus 로고
    • Crystal structure of the IrrE protein, a central regulator of DNA damage repair in Deinococcaceae
    • Vujicic-Zagar A., Dulermo R., Le Gorrec M., Vannier F., Servant P., Sommer S., et al. Crystal structure of the IrrE protein, a central regulator of DNA damage repair in Deinococcaceae. J Mol Biol 2009, 386:704-716.
    • (2009) J Mol Biol , vol.386 , pp. 704-716
    • Vujicic-Zagar, A.1    Dulermo, R.2    Le Gorrec, M.3    Vannier, F.4    Servant, P.5    Sommer, S.6
  • 65
    • 34250619055 scopus 로고    scopus 로고
    • Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization
    • Wade J.T., Struhl K., Busby S.J.W., Grainger D.C. Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization. Mol Microbiol 2007, 65:21-26.
    • (2007) Mol Microbiol , vol.65 , pp. 21-26
    • Wade, J.T.1    Struhl, K.2    Busby, S.J.W.3    Grainger, D.C.4
  • 66
    • 84868135591 scopus 로고    scopus 로고
    • Global regulator engineering significantly improved Escherichia coli tolerances toward inhibitors of lignocellulosic hydrolysates
    • Wang J.Q., Zhang Y., Chen Y.L., Lin M., Lin Z.L. Global regulator engineering significantly improved Escherichia coli tolerances toward inhibitors of lignocellulosic hydrolysates. Biotechnol Bioeng 2012, 109:3133-3142.
    • (2012) Biotechnol Bioeng , vol.109 , pp. 3133-3142
    • Wang, J.Q.1    Zhang, Y.2    Chen, Y.L.3    Lin, M.4    Lin, Z.L.5
  • 67
  • 68
    • 33749514099 scopus 로고    scopus 로고
    • Genomic analysis of the hierarchical structure of regulatory networks
    • Yu H.Y., Gerstein M. Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 2006, 103:14724-14731.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 14724-14731
    • Yu, H.Y.1    Gerstein, M.2
  • 69
    • 84858439567 scopus 로고    scopus 로고
    • Random mutagenesis of global transcription factor cAMP receptor protein for improved osmotolerance
    • Zhang H.F., Chong H.Q., Ching C.B., Jiang R.R. Random mutagenesis of global transcription factor cAMP receptor protein for improved osmotolerance. Biotechnol Bioeng 2012, 109:1165-1172.
    • (2012) Biotechnol Bioeng , vol.109 , pp. 1165-1172
    • Zhang, H.F.1    Chong, H.Q.2    Ching, C.B.3    Jiang, R.R.4
  • 70
    • 84862853727 scopus 로고    scopus 로고
    • Engineering global transcription factor cyclic AMP receptor protein of Escherichia coli for improved 1-butanol tolerance
    • Zhang H.F., Chong H.Q., Ching C.B., Song H., Jiang R.R. Engineering global transcription factor cyclic AMP receptor protein of Escherichia coli for improved 1-butanol tolerance. Appl Microbiol Biotechnol 2012, 94:1107-1117.
    • (2012) Appl Microbiol Biotechnol , vol.94 , pp. 1107-1117
    • Zhang, H.F.1    Chong, H.Q.2    Ching, C.B.3    Song, H.4    Jiang, R.R.5
  • 71
    • 77954993979 scopus 로고    scopus 로고
    • IrrE, an exogenous gene from Deinococcus radiodurans, improves the growth of and ethanol production by a Zymomonas mobilis strain under ethanol and acid stresses
    • Zhang Y., Ma R.Q., Zhao Z.L., Zhou Z.F., Lu W., Zhang W., et al. irrE, an exogenous gene from Deinococcus radiodurans, improves the growth of and ethanol production by a Zymomonas mobilis strain under ethanol and acid stresses. J Microbiol Biotechnol 2010, 20:1156-1162.
    • (2010) J Microbiol Biotechnol , vol.20 , pp. 1156-1162
    • Zhang, Y.1    Ma, R.Q.2    Zhao, Z.L.3    Zhou, Z.F.4    Lu, W.5    Zhang, W.6
  • 72
    • 24044489239 scopus 로고    scopus 로고
    • The global transcriptional response of Escherichia coli to induced sigma(32) protein involves sigma(32) regulon activation followed by inactivation and degradation of sigma(32) in vivo
    • Zhao K., Liu M.Z., Burgess R.R. The global transcriptional response of Escherichia coli to induced sigma(32) protein involves sigma(32) regulon activation followed by inactivation and degradation of sigma(32) in vivo. J Biol Chem 2005, 280:17758-17768.
    • (2005) J Biol Chem , vol.280 , pp. 17758-17768
    • Zhao, K.1    Liu, M.Z.2    Burgess, R.R.3
  • 73
    • 7444245668 scopus 로고    scopus 로고
    • Identification of the CRP regulon using in vitro and in vivo transcriptional profiling
    • Zheng D.L., Constantinidou C., Hobman J.L., Minchin S.D. Identification of the CRP regulon using in vitro and in vivo transcriptional profiling. Nucleic Acids Res 2004, 32:5874-5893.
    • (2004) Nucleic Acids Res , vol.32 , pp. 5874-5893
    • Zheng, D.L.1    Constantinidou, C.2    Hobman, J.L.3    Minchin, S.D.4
  • 74
    • 79954490670 scopus 로고    scopus 로고
    • Genome-wide transcriptome and proteome analysis of Escherichia coli expressing IrrE, a global regulator of Deinococcus radiodurans
    • Zhou Z.F., Zhang W., Chen M., Pan J., Lu W., Ping S.Z., et al. Genome-wide transcriptome and proteome analysis of Escherichia coli expressing IrrE, a global regulator of Deinococcus radiodurans. Mol Biosyst 2011, 7:1613-1620.
    • (2011) Mol Biosyst , vol.7 , pp. 1613-1620
    • Zhou, Z.F.1    Zhang, W.2    Chen, M.3    Pan, J.4    Lu, W.5    Ping, S.Z.6


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