Aquatic Environments

Environmental Microbiology

Volumn , Issue , 2009, Pages 103-122

  Sandrin, Todd R ^a   Dowd, Scot E ^b   Herman, David C ^c   Maier, Raina M ^c  

^a UNIVERSITY OF WISCONSIN   (United States)

^b Livestock Issues Research Unit   (United States)

^c UNIVERSITY OF ARIZONA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84882554407     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-0-12-370519-8.00006-7     Document Type: Chapter

References (45)

1. Ashelford K.E., Day M.J., Fry J.C. Elevated abundance of bacteriophage infecting bacteria in soil. Appl. Environ. Microbiol. 2003, 69:285-289.
2. Atlas R.M., Bartha R. "Microbial Ecology" 1993, Benjamin Cummings, Redwood City, CA.
3. CNN Study hints at extreme climate change. Environmental News Network http://www.cnn.com/NATURE/9910/28/climate.change.enn/.
4. Costerton J.W., Lewandowski Z., Caldwell D.E., Korber D.R., Lappinscott H.M. Microbial biofilms. Annu. Rev. Microbiol. 1995, 49:711-745.
5. CSCOR Sponsored research advances efforts to understand recent Florida red tide events Center for Sponsored Coastal Ocean Research, NOAA http://www.cop.noaa.gov/stressors/extremeevents/hab/features/florida_040 6.html.
6. Damarem S., Raghukumar C., Muraleedharan U.D., Raghukumar S. Deep-sea fungi as a source of alkaline and cold-tolerant proteases. Enzyme Microb. Technol. 2006, 39:172-181.
7. Davies D.G., Parsek M.R., Pearson J.P., Iglewski B.H., Costerton J.W., Greenberg E.P. The involvement of cell-to-cell signals in the development of a bacterial biofilm. Science 1998, 280:295-298.
8. Davey M.E., O'Toole G.A. Microbial biofilms: From ecology to molecular genetics. Microbiol. Mol. Biol. Rev. 2000, 64:847-867.
9. De la Rocha C.L. The biological pump. "The Oceans and Marine Geochemistry" 2006, 83-111. Elsevier, New York. H. Elderfield (Ed.).
10. Des Marais D.J. Biogeochemistry of hypersaline microbial mats illustrates the dynamics of modern microbial ecosystems and the early evolution of the biosphere. Biol. Bull. 2003, 204:160-167.
11. Ducklow H.W., Shiah F. Bacterial production in estuaries. "Aquatic Microbiology: An Ecological Approach" 1993, 261-287. Blackwell Scientific Publications, Cambridge, MA. T.E. Ford (Ed.).
12. Falkowski P.G., De Vargas C. Shotgun sequencing in the sea: A blast from the past?. Science 2004, 304:58-60.
13. Fuhrman J. Bacterioplankton roles in cycling of organic matter: The microbial food web. "Primary Productivity and Biogeochemical Cycles in the Sea" 1992, 361-383. Plenum, New York. P.G. Falkowski, A.D. Woodhead (Eds.).
14. Geesey G.G., Mutch R., Costerton J.W., Green R.B. Sessile bacteria: An important component of the microbial population in small mountain streams. Limnol. Oceanogr. 1978, 1214-1223.
15. Genome News Network Exploring the Sargasso Sea, J. Craig Venter Institute http://www.genomenewsnetwork.org/articles/2004/03/04/sargasso.php.
16. Golubic S., Radtke G., Le Campion-Alsumard T. Endolithic fungi in marine ecosystems. Trends Microbiol. 2005, 13:229-235.
17. Hennes K.P., Simon M. Significance of bacteriophages for controlling bacterioplankton growth in a mesotrophic lake. Appl. Environ. Microbiol. 1995, 61:333-340.
18. Hoehler T.M., Bebout B.M., Des Marais D.J. The role of microbial mats in the production of reduced gases on the early Earth. Nature 2001, 19:324-327.
19. Jones G.L., Muller C.T., O'Reilly M., Stickler D.J. Effect of triclosan on the development of bacterial biofilms by urinary tract pathogens on urinary catheters. J. Antimicrob. Chemother. 2006, 57:266-272.
20. Kaplan L.A., Newbold J.D. Biogeochemistry of dissolved organic carbon entering streams. "Aquatic Microbiology: An Ecological Approach" 1993, 139-165. Blackwell Scientific Publications, Cambridge, MA. T.E. Ford (Ed.).
21. Kirchman D.L. DOM and heterotrophic prokaryotes in the oceans. "The Ocean Carbon Cycle and Climate", NATO Science Series IV, Earth and Environmental Sciences 2004, Vol. 40:31-63. Kluwer Academic Publishers. M. Follows, T. Oguz (Eds.).
22. Kolenbrander P.E., Andersen R.N., Kazmerzak K., Wu R., Palmer R.J. Spatial organization of oral bacteria in biofilms. Methods Enzymol. 1999, 310:322-332.
23. Konopka A.E. Distribution and activity of microorganisms in lakes: Effects of physical processes. "Aquatic Microbiology: An Ecological Approach" 1993, 47-68. Blackwell Scientific Publications, Cambridge, MA. T.E. Ford (Ed.).
24. Korber D.R., Lawrence J.R., Lappin-Scott H.M., Costerton J.W. Growth of microorganisms on surfaces. "Microbial Biofilms" 1995, 15-45. Cambridge University Press, Cambridge, MA. H.M. Lappin-Scott, J.W. Costerton (Eds.).
25. Maki J.S. The air-water interface as an extreme environment. "Aquatic Microbiology: An Ecological Approach" 1993, 409-440. Blackwell Scientific Publications, Cambridge, MA. T.E. Ford (Ed.).
26. Marshall K.C. Mechanisms of bacterial adhesion at solid-liquid interfaces. "Bacterial Adhesion: Mechanisms and Physiological Significance" 1985, 131-161. Plenum, New York. D.C. Savage, M. Fletcher (Eds.).
27. Marshall K.C. Biofilms: An overview of bacterial adhesion, activity, and control at surfaces. Am. Soc. Microbiol. (ASM) News 1992, 58:202-207.
28. Marshall K.C. Colonization, adhesion, and biofilms. "Manual of Environmental Microbiology" 1997, 358-365. American Society for Microbiology Press, Washington, DC. C.J. Hurst, G.R. Knudsen, M.J. McInerney, L.D. Stetzenbach, M.V. Walter (Eds.).
29. Middledoe M., Jorgensen N.O.G., Kroer N. Effects of viruses on nutrient turnover and growth efficiency of noninfected marine bacterioplankton. Appl. Environ. Microbiol. 1996, 62:1991-1997.
30. Miller M.B., Bassler B.L. Quorum sensing in bacteria. Annu. Rev. Microbiol. 2001, 55:165-199.
31. MSU Center for Biofilm Engineering Montana State University, Bozeman, Montana http://www.erc.montana.edu/Res-Lib99-SW/Image_Library/Structure-Function /Full-image%20pages/BiofilmWithLabelsjpg.htm.
32. NASA Exportadora de Sal saltern system, Guerrero Negro, Baja California Sur, Mexico http://microbes.arc.nasa.gov/gallery/guerrero.html.
33. NASA California's Channel Islands from Shore to Sea. NASA Earth Observatory website http://earthobservatory.nasa.gov/Laboratory/ICE/ice_channel_islands.html .
34. Pearl H.W., Pinckney J.L. A mini-review of microbial consortia: Their roles in aquatic production and biogeochemical cycling. Microb. Ecol. 1996, 31:225-247.
35. Rheinheimer G. "Aquatic Microbiology" 1985, 1-247. Wiley, New York. Third Ed.
36. Ruby J., Gerencser V. Human dental plaque showing iodophilic poilysaccharide synthesis. American Society for Microbiology MicrobeLibrary.org http://www.microbelibrary.org/asmonly/details.asp?id=537&Lang=.
37. Scott M.R. Ocean Biogeochemistry from: Water Encyclopedia: Science and Issues http://www.waterencyclopedia.com/Mi-Oc/Ocean-Biogeochemistry.html.
38. Singleton S., Treloar R., Warren P., Watson G.K., Hodgson R., Allison C. Methods for microscopic characterization of oral biofilms: analysis of colonization, microstructure, and molecular transport phenomena. Adv. Dent. Res. 1997, 11:133-149.
39. Suttle C.A. The significance of viruses to mortality in aquatic microbial communities. Microb. Ecol. 1994, 28:237-243.
40. Venter J.C., Remington K., Heidelberg J.F., Halpern A.L., Rusch D., Eisen J.A., Wu D.Y., Paulsen I., Nelson K.E., Nelson W., Fouts D.E., Levy S., Knap A.H., Lomas M.W., Nealson K., White O., Peterson J., Hoffman J., Parsons R., Baden-Tillson H., Pfannkoch C., Rogers Y.H., Smith H.O. Environmental genome shotgun sequencing of the Sargasso Sea. Science 2004, 304:66-74.
41. Wetzel R.G. "Limnology," Second Ed. 1983, Saunders College Publishing, New York, .
42. Weinbauer M.G. Ecology of prokaryotic viruses. FEMS Microbiol. Rev. 2004, 28:127-181.
43. Whitlock J.L. Biological detoxification of precious metal processing wastewaters. Geomicrobiol. J. 1990, 8:241-249.
44. Wolfaardt G.M., Lawrence J.R., Robarts R.D., Caldwell S.J., Caldwell D.E. Multicellular organization in a degradative biofilm community. Appl. Environ. Microbiol. 1994, 60:434-446.
45. Wommack K.E., Colwell R.R. Virioplankton: viruses in aquatic ecosystems. Microbiol. Mol. Biol. Rev. 2000, 64:69-114.