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Volumn , Issue , 2013, Pages 1741-1742

Which is faster: Bowtie2GP > bowtie > bowtie2 > BWA

Author keywords

Bowtie2gp; Double ended DNA sequence; Fuzzy string matching; Homo sapiens genome reference consortium GRCh37.p5 h sapiens 37.5 asm; IP29; SBSE; Sequence query; Smith waterman; Solexa nextgen NGS

Indexed keywords

BOWTIE2GP; HOMO SAPIENS; IP29; NEXTGEN; SBSE; SEQUENCE QUERIES; SMITH-WATERMAN; STRING MATCHING;

EID: 84882320672     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2464576.2480772     Document Type: Conference Paper
Times cited : (5)

References (6)
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    • William B. Langdon and Mark Harman, "Genetically improving 50000 lines of C++, " Research Note RN/12/09, Department of Computer Science, University College London, Gower Street, London WC1E 6BT, UK, 19 Sept. 2012.
    • (2012) Genetically Improving 50000 Lines of C+
    • Langdon, W.B.1    Harman, M.2
  • 2
    • 84859210032 scopus 로고    scopus 로고
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    • 4 March
    • Ben Langmead and Steven L Salzberg, "Fast gapped-read alignment with Bowtie 2, " Nature Methods, vol. 9, no. 4, pp. 357-359, 4 March 2012.
    • (2012) Nature Methods , vol.9 , Issue.4 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 3
    • 65549161963 scopus 로고    scopus 로고
    • Published via, and freely available at http://www.gp-field-guide.org.uk, (With contributions by J. R. Koza
    • Riccardo Poli, William B. Langdon, and Nicholas Freitag McPhee, A field guide to genetic programming, Published via http://lulu.comand freely available at http://www.gp-field-guide.org.uk, 2008, (With contributions by J. R. Koza).
    • (2008) A Field Guide to Genetic Programming
    • Poli, R.1    Langdon, W.B.2    Mcphee, N.F.3
  • 4
    • 77949587649 scopus 로고    scopus 로고
    • Fast and accurate long-read alignment with burrows-wheeler transform
    • Heng Li and Richard Durbin, "Fast and accurate long-read alignment with Burrows-Wheeler transform, " Bioinformatics, vol. 26, no. 5, pp. 589-595, 2010.
    • (2010) Bioinformatics , vol.26 , Issue.5 , pp. 589-595
    • Li, H.1    Durbin, R.2
  • 5
    • 84870822864 scopus 로고    scopus 로고
    • Tools for mapping high-throughput sequencing data
    • Nuno A. Fonseca, Johan Rung, Alvis Brazma, and John C. Marioni, "Tools for mapping high-throughput sequencing data, " Bioinformatics, vol. 28, no. 24, pp. 3169-3177, 2012.
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    • Fonseca, N.A.1    Rung, J.2    Brazma, A.3    Marioni, J.C.4
  • 6
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST a new generation of protein database search programs
    • Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman, "Gapped BLAST and PSI-BLAST a new generation of protein database search programs, " Nucleic Acids Research, vol. 25, no. 17, pp. 3389-3402, 1997.
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.