메뉴 건너뛰기




Volumn 77, Issue , 2012, Pages 161-173

Active DNA demethylation in plants and animals

Author keywords

[No Author keywords available]

Indexed keywords

5 METHYLCYTOSINE; CYTOSINE; DNA; DNA BASE; DNA GLYCOSYLTRANSFERASE; UNTRANSLATED RNA; DNA METHYLTRANSFERASE;

EID: 84881520152     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.2012.77.014936     Document Type: Article
Times cited : (118)

References (113)
  • 1
    • 33746807366 scopus 로고    scopus 로고
    • Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation
    • Agius F, Kapoor A, Zhu JK. 2006. Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation. Proc Natl Acad Sci 103: 11796-11801.
    • (2006) Proc Natl Acad Sci , vol.103 , pp. 11796-11801
    • Agius, F.1    Kapoor, A.2    Zhu, J.K.3
  • 3
    • 0035169663 scopus 로고    scopus 로고
    • Methyl-CpG-binding proteins
    • Ballestar E, Wolffe AP. 2001. Methyl-CpG-binding proteins. Targeting specific gene repression. Eur J Biochem 268: 1-6.
    • (2001) Eur J Biochem , vol.268 , pp. 1-6
    • Ballestar, E.1    Wolffe, A.P.2
  • 4
    • 77649104794 scopus 로고    scopus 로고
    • Reprogramming towards pluripotency requires AID-dependent DNA demethylation
    • Bhutani N, Brady JJ, Damian M, Sacco A, Corbel SY, Blau HM. 2010. Reprogramming towards pluripotency requires AID-dependent DNA demethylation. Nature 463: 1042-1047.
    • (2010) Nature , vol.463 , pp. 1042-1047
    • Bhutani, N.1    Brady, J.J.2    Damian, M.3    Sacco, A.4    Corbel, S.Y.5    Blau, H.M.6
  • 5
    • 80052933429 scopus 로고    scopus 로고
    • DNA demethylation dynamics
    • Bhutani N, Burns DM, Blau HM. 2011. DNA demethylation dynamics. Cell 146: 866-872.
    • (2011) Cell , vol.146 , pp. 866-872
    • Bhutani, N.1    Burns, D.M.2    Blau, H.M.3
  • 6
    • 0037340215 scopus 로고    scopus 로고
    • Selective, stable demethylation of the interleukin-2 gene enhances transcription by an active process
    • Bruniquel D, Schwartz RH. 2003. Selective, stable demethylation of the interleukin-2 gene enhances transcription by an active process. Nat Immunol 4: 235-240.
    • (2003) Nat Immunol , vol.4 , pp. 235-240
    • Bruniquel, D.1    Schwartz, R.H.2
  • 7
    • 0037046810 scopus 로고    scopus 로고
    • Role of the Arabidopsis DRM methyltransferases in denovo DNA methylation and gene silencing
    • Cao X, Jacobsen SE. 2002. Role of the Arabidopsis DRM methyltransferases in denovo DNA methylation and gene silencing. Curr Biol 12: 1138-1144.
    • (2002) Curr Biol , vol.12 , pp. 1138-1144
    • Cao, X.1    Jacobsen, S.E.2
  • 8
    • 67349190247 scopus 로고    scopus 로고
    • Linking DNA methylation and histone modification: Patterns and paradigms
    • Cedar H, Bergman Y. 2009. Linking DNA methylation and histone modification: Patterns and paradigms. Nat Rev Genet 10: 295-304.
    • (2009) Nat Rev Genet , vol.10 , pp. 295-304
    • Cedar, H.1    Bergman, Y.2
  • 9
    • 0141755305 scopus 로고    scopus 로고
    • T:G mismatch-specific thymine-DNA glycosylase potentiates transcription of estrogen-regulated genes through direct interaction with estrogen receptor alpha
    • Chen D, Lucey MJ, Phoenix F, Lopez-Garcia J, Hart SM, Losson R, Buluwela L, Coombes RC, Chambon P, Schär P, et al. 2003. T:G mismatch-specific thymine-DNA glycosylase potentiates transcription of estrogen-regulated genes through direct interaction with estrogen receptor alpha. J Biol Chem 278: 38586-38592.
    • (2003) J Biol Chem , vol.278 , pp. 38586-38592
    • Chen, D.1    Lucey, M.J.2    Phoenix, F.3    Lopez-Garcia, J.4    Hart, S.M.5    Losson, R.6    Buluwela, L.7    Coombes, R.C.8    Chambon, P.9    Schär, P.10
  • 10
    • 40049094942 scopus 로고    scopus 로고
    • Mammalian DNA methyl-transferases: A structural perspective
    • Cheng X, Blumenthal RM. 2008. Mammalian DNA methyl-transferases: A structural perspective. Structure 16: 341-350.
    • (2008) Structure , vol.16 , pp. 341-350
    • Cheng, X.1    Blumenthal, R.M.2
  • 11
    • 73449102478 scopus 로고    scopus 로고
    • The interaction between thymine DNA glycosylase and nuclear receptor coactivator 3 is required for the transcriptional activation of nuclear hormone receptors
    • Chiang S, Burch T, Van Domselaar G, Dick K, Radziwon A, Brusnyk C, Edwards MR, Piper J, Cutts T, Cao J, et al. 2010. The interaction between thymine DNA glycosylase and nuclear receptor coactivator 3 is required for the transcriptional activation of nuclear hormone receptors. Mol Cell Biochem 333: 221-232.
    • (2010) Mol Cell Biochem , vol.333 , pp. 221-232
    • Chiang, S.1    Burch, T.2    Van Domselaar, G.3    Dick, K.4    Radziwon, A.5    Brusnyk, C.6    Edwards, M.R.7    Piper, J.8    Cutts, T.9    Cao, J.10
  • 13
    • 0037067658 scopus 로고    scopus 로고
    • TER,a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis
    • Choi Y, Gehring M, Johnson L, Hannon M, Harada JJ, Goldberg RB, Jacobsen SE, Fischer RL. 2002. TER,a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in Arabidopsis. Cell 110: 33-42.
    • (2002) Cell , vol.110 , pp. 33-42
    • Choi, Y.1    Gehring, M.2    Johnson, L.3    Hannon, M.4    Harada, J.J.5    Goldberg, R.B.6    Jacobsen, S.E.7    Fischer, R.L.8
  • 14
    • 34249807921 scopus 로고    scopus 로고
    • DNA deamination in immunity: AID in the context of its APOBEC relatives
    • Conticello SG, Langlois MA, Yang Z, Neuberger MS. 2007. DNA deamination in immunity: AID in the context of its APOBEC relatives. Adv Immunol 94: 37-73.
    • (2007) Adv Immunol , vol.94 , pp. 37-73
    • Conticello, S.G.1    Langlois, M.A.2    Yang, Z.3    Neuberger, M.S.4
  • 16
    • 0035923602 scopus 로고    scopus 로고
    • Conservation of methylation reprogramming in mammalian development: Aberrant reprogramming in cloned embryos
    • Dean W,Santos F, Stojkovic M,ZakhartchenkoV,WalterJ,Wolf E, Reik W. 2001. Conservation of methylation reprogramming in mammalian development: Aberrant reprogramming in cloned embryos. Proc Natl Acad Sci 98: 13734-13738.
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 13734-13738
    • Dean, W.1    Santos, F.2    Stojkovic, M.3    Zakhartchenko, V.4    Walter, J.5    Wolf, E.6    Reik, W.7
  • 17
    • 57749199276 scopus 로고    scopus 로고
    • Interplay of RNA Pol IV and ROS1 during post-embryonic 5S rDNA chromatin remodeling
    • Douet J, Blanchard B, Cuvillier C, Tourmente S. 2008. Interplay of RNA Pol IV and ROS1 during post-embryonic 5S rDNA chromatin remodeling. Plant Cell Physiol 49: 1783-1791.
    • (2008) Plant Cell Physiol , vol.49 , pp. 1783-1791
    • Douet, J.1    Blanchard, B.2    Cuvillier, C.3    Tourmente, S.4
  • 18
    • 10344240948 scopus 로고    scopus 로고
    • The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome
    • Duroux M, Houben A, Ruzicka K, Friml J, Grasser KD. 2004. The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome. Plant J 40: 660-671.
    • (2004) Plant J , vol.40 , pp. 660-671
    • Duroux, M.1    Houben, A.2    Ruzicka, K.3    Friml, J.4    Grasser, K.D.5
  • 20
    • 0345467527 scopus 로고    scopus 로고
    • Demethylation of DNA by purified chick embryo 5-methylcytosine-DNA glycosylase requires both protein and RNA
    • Frémont M, Siegmann M, Gaulis S, Matthies R, Hess D, Jost JP. 1997. Demethylation of DNA by purified chick embryo 5-methylcytosine-DNA glycosylase requires both protein and RNA. Nucleic Acids Res 25: 2375-2380.
    • (1997) Nucleic Acids Res , vol.25 , pp. 2375-2380
    • Frémont, M.1    Siegmann, M.2    Gaulis, S.3    Matthies, R.4    Hess, D.5    Jost, J.P.6
  • 23
    • 67149086996 scopus 로고    scopus 로고
    • Extensive demethylation of repetitive elements during seed development underlies gene imprinting
    • Gehring M, Bubb KL, Henikoff S. 2009. Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science 324: 1447-1451.
    • (2009) Science , vol.324 , pp. 1447-1451
    • Gehring, M.1    Bubb, K.L.2    Henikoff, S.3
  • 24
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • Goll MG, Bestor TH. 2005. Eukaryotic cytosine methyltransferases. Annu Rev Biochem 74: 481-514.
    • (2005) Annu Rev Biochem , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 25
    • 0037074009 scopus 로고    scopus 로고
    • ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase
    • Gong Z, Morales-Ruiz T, Ariza RR, Roldán-Arjona T, David L, Zhu JK. 2002. ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase. Cell 111: 803-814.
    • (2002) Cell , vol.111 , pp. 803-814
    • Gong, Z.1    Morales-Ruiz, T.2    Ariza, R.R.3    Roldán-Arjona, T.4    David, L.5    Zhu, J.K.6
  • 26
    • 0034234237 scopus 로고    scopus 로고
    • CBP/p300 in cell growth, transformation, and development
    • Goodman RH, Smolik S. 2000. CBP/p300 in cell growth, transformation, and development. Genes Dev 14: 1553-1577.
    • (2000) Genes Dev , vol.14 , pp. 1553-1577
    • Goodman, R.H.1    Smolik, S.2
  • 28
    • 79955538247 scopus 로고    scopus 로고
    • Hydroxylation of 5-methylcytosine by TET1 promotes active DNA de-methylation in the adult brain
    • Guo JU, Su Y, Zhong C, Ming GL, Song H.2011. Hydroxylation of 5-methylcytosine by TET1 promotes active DNA de-methylation in the adult brain. Cell 145: 423-434.
    • (2011) Cell , vol.145 , pp. 423-434
    • Guo, J.U.1    Su, Y.2    Zhong, C.3    Ming, G.L.4    Song, H.5
  • 29
    • 79960716754 scopus 로고    scopus 로고
    • Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing
    • Haag JR, Pikaard CS. 2011. Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing. Nat Rev Mol Cell Biol 12: 483-492.
    • (2011) Nat Rev Mol Cell Biol , vol.12 , pp. 483-492
    • Haag, J.R.1    Pikaard, C.S.2
  • 32
    • 77954345408 scopus 로고    scopus 로고
    • Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway
    • Hajkova P, Jeffries SJ, Lee C, Miller N, Jackson SP, Surani MA. 2010. Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway. Science 329: 78-82.
    • (2010) Science , vol.329 , pp. 78-82
    • Hajkova, P.1    Jeffries, S.J.2    Lee, C.3    Miller, N.4    Jackson, S.P.5    Surani, M.A.6
  • 34
    • 80052495940 scopus 로고    scopus 로고
    • Tet-mediated formation of 5-carboxylcy-tosine and its excision by TDG in mammalian DNA
    • He YF, Li BZ, Li Z, Liu P, Wang Y, Tang Q, Ding J, Jia Y, Chen Z, Li L, et al. 2011. Tet-mediated formation of 5-carboxylcy-tosine and its excision by TDG in mammalian DNA. Science 333: 1303-1307.
    • (2011) Science , vol.333 , pp. 1303-1307
    • He, Y.F.1    Li, B.Z.2    Li, Z.3    Liu, P.4    Wang, Y.5    Tang, Q.6    Ding, J.7    Jia, Y.8    Chen, Z.9    Li, L.10
  • 35
    • 34249330696 scopus 로고    scopus 로고
    • Epigenetic inheritance in plants
    • Henderson IR, Jacobsen SE. 2007. Epigenetic inheritance in plants. Nature 447: 418-424.
    • (2007) Nature , vol.447 , pp. 418-424
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 38
    • 33745561418 scopus 로고    scopus 로고
    • Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
    • Huettel B, Kanno T, Daxinger L, Aufsatz W, Matzke AJ, Matzke M. 2006. Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J 25: 2828-2836.
    • (2006) EMBO J , vol.25 , pp. 2828-2836
    • Huettel, B.1    Kanno, T.2    Daxinger, L.3    Aufsatz, W.4    Matzke, A.J.5    Matzke, M.6
  • 39
    • 39749196238 scopus 로고    scopus 로고
    • Cellular programming of plant gene imprinting
    • Huh JH, Bauer MJ, Hsieh TF, Fischer RL. 2008. Cellular programming of plant gene imprinting. Cell 132: 735-744.
    • (2008) Cell , vol.132 , pp. 735-744
    • Huh, J.H.1    Bauer, M.J.2    Hsieh, T.F.3    Fischer, R.L.4
  • 41
    • 80054097425 scopus 로고    scopus 로고
    • Replication-dependent loss of 5-hy-droxymethylcytosine in mouse preimplantation embryos
    • Inoue A, Zhang Y. 2011. Replication-dependent loss of 5-hy-droxymethylcytosine in mouse preimplantation embryos. Science 334: 194.
    • (2011) Science , vol.334 , pp. 194
    • Inoue, A.1    Zhang, Y.2
  • 42
    • 79952763586 scopus 로고    scopus 로고
    • Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine
    • Iqbal K, Jin SG, Pfeifer GP, Szabó PE. 2011. Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine. Proc Natl Acad Sci 108: 3642-3647.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 3642-3647
    • Iqbal, K.1    Jin, S.G.2    Pfeifer, G.P.3    Szabó, P.E.4
  • 43
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retro-transposition in plants subjected to stress
    • Ito H, Gaubert H, Bucher E, Mirouze M, Vaillant I, Paszkowski J. 2011a. An siRNA pathway prevents transgenerational retro-transposition in plants subjected to stress. Nature 472:115-119.
    • (2011) Nature , vol.472 , pp. 115-119
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 44
    • 80052461558 scopus 로고    scopus 로고
    • Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
    • Ito S, Shen L, Dai Q, Wu SC, Collins LB, Swenberg JA, He C, Zhang Y. 2011b. Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine. Science 333: 1300-1303.
    • (2011) Science , vol.333 , pp. 1300-1303
    • Ito, S.1    Shen, L.2    Dai, Q.3    Wu, S.C.4    Collins, L.B.5    Swenberg, J.A.6    He, C.7    Zhang, Y.8
  • 45
    • 0032963687 scopus 로고    scopus 로고
    • A reinvestigation of the ribonuclease sensitivity of a DNA demethylation reaction in chicken embryo and G8 mouse myoblasts
    • Jost JP, Siegmann M, Thiry S, Jost YC, Benjamin D, Schwarz S. 1999. A reinvestigation of the ribonuclease sensitivity of a DNA demethylation reaction in chicken embryo and G8 mouse myoblasts. FEBS Lett 449: 251-254.
    • (1999) FEBS Lett , vol.449 , pp. 251-254
    • Jost, J.P.1    Siegmann, M.2    Thiry, S.3    Jost, Y.C.4    Benjamin, D.5    Schwarz, S.6
  • 48
    • 0037298161 scopus 로고    scopus 로고
    • Resistance of IAPs to methylation reprogramming may provide a mechanism for epigenetic inheritance in the mouse
    • Lane N, Dean W, Erhardt S, Hajkova P, Surani A, Walter J, Reik W. 2003. Resistance of IAPs to methylation reprogramming may provide a mechanism for epigenetic inheritance in the mouse. Genesis 35: 88-93.
    • (2003) Genesis , vol.35 , pp. 88-93
    • Lane, N.1    Dean, W.2    Erhardt, S.3    Hajkova, P.4    Surani, A.5    Walter, J.6    Reik, W.7
  • 49
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law JA, Jacobsen SE. 2010. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11: 204-220.
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 50
    • 53249098795 scopus 로고    scopus 로고
    • A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints
    • Li X, Ito M, Zhou F, Youngson N, Zuo X, Leder P, Ferguson-Smith AC. 2008. A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints. Dev Cell 15: 547-557.
    • (2008) Dev Cell , vol.15 , pp. 547-557
    • Li, X.1    Ito, M.2    Zhou, F.3    Youngson, N.4    Zuo, X.5    Leder, P.6    Ferguson-Smith, A.C.7
  • 53
    • 77956798477 scopus 로고    scopus 로고
    • DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis
    • Liu Q, Wang J, Miki D, Xia R, Yu W, He J, Zheng Z, Zhu JK, Gong Z. 2010. DNA replication factor C1 mediates genomic stability and transcriptional gene silencing in Arabidopsis. Plant Cell 22: 2336-2352.
    • (2010) Plant Cell , vol.22 , pp. 2336-2352
    • Liu, Q.1    Wang, J.2    Miki, D.3    Xia, R.4    Yu, W.5    He, J.6    Zheng, Z.7    Zhu, J.K.8    Gong, Z.9
  • 54
    • 28544432100 scopus 로고    scopus 로고
    • T:G mismatch-specific thymine-DNA glycosylase (TDG) as a coregulator of transcription interacts with SRC1 family members through a novel tyrosine repeat motif
    • Lucey MJ, Chen D, Lopez-Garcia J, Hart SM, Phoenix F, Al-Jehani R, Alao JP, White R, Kindle KB, Losson R, et al. 2005. T:G mismatch-specific thymine-DNA glycosylase (TDG) as a coregulator of transcription interacts with SRC1 family members through a novel tyrosine repeat motif. Nucleic Acids Res 33: 6393-6404.
    • (2005) Nucleic Acids Res , vol.33 , pp. 6393-6404
    • Lucey, M.J.1    Chen, D.2    Lopez-Garcia, J.3    Hart, S.M.4    Phoenix, F.5    Al-Jehani, R.6    Alao, J.P.7    White, R.8    Kindle, K.B.9    Losson, R.10
  • 56
    • 80053917872 scopus 로고    scopus 로고
    • Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: Potential implications for active demethylation of CpG sites
    • Maiti A, Drohat AC. 2011. Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: Potential implications for active demethylation of CpG sites. J Biol Chem 286: 35334-35338.
    • (2011) J Biol Chem , vol.286 , pp. 35334-35338
    • Maiti, A.1    Drohat, A.C.2
  • 59
    • 34548299554 scopus 로고    scopus 로고
    • Transgenerational stability of the Arabidopsis epige-nome is coordinated by CG methylation
    • Mathieu O, Reinders J, Caikovski M, Smathajitt C, Paszkowski J. 2007. Transgenerational stability of the Arabidopsis epige-nome is coordinated by CG methylation. Cell 130: 851-862.
    • (2007) Cell , vol.130 , pp. 851-862
    • Mathieu, O.1    Reinders, J.2    Caikovski, M.3    Smathajitt, C.4    Paszkowski, J.5
  • 63
    • 65349171662 scopus 로고    scopus 로고
    • An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites
    • Miura A, Nakamura M, Inagaki S, Kobayashi A, Saze H, Kaku-tani T. 2009. An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites. EMBO J 28: 1078-1086.
    • (2009) EMBO J , vol.28 , pp. 1078-1086
    • Miura, A.1    Nakamura, M.2    Inagaki, S.3    Kobayashi, A.4    Saze, H.5    Kaku-tani, T.6
  • 65
    • 77952403409 scopus 로고    scopus 로고
    • Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
    • Molnar A, Melnyk CW, Bassett A, Hardcastle TJ, Dunn R, Baulcombe DC. 2010. Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 328: 872-875.
    • (2010) Science , vol.328 , pp. 872-875
    • Molnar, A.1    Melnyk, C.W.2    Bassett, A.3    Hardcastle, T.J.4    Dunn, R.5    Baulcombe, D.C.6
  • 67
    • 10644282845 scopus 로고    scopus 로고
    • Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: Implications for epigenetic reprogramming
    • Morgan HD, Dean W, Coker HA, Reik W, Petersen-Mahrt SK. 2004. Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: Implications for epigenetic reprogramming. J Biol Chem 279: 52353-52360.
    • (2004) J Biol Chem , vol.279 , pp. 52353-52360
    • Morgan, H.D.1    Dean, W.2    Coker, H.A.3    Reik, W.4    Petersen-Mahrt, S.K.5
  • 69
    • 42549096814 scopus 로고    scopus 로고
    • PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis
    • Mosher RA, Schwach F, Studholme D, Baulcombe DC. 2008. PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis. Proc Natl Acad Sci 105: 3145-3150.
    • (2008) Proc Natl Acad Sci , vol.105 , pp. 3145-3150
    • Mosher, R.A.1    Schwach, F.2    Studholme, D.3    Baulcombe, D.C.4
  • 70
    • 0034268780 scopus 로고    scopus 로고
    • Class switch recombination and hypermuta-tion require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
    • Muramatsu M, Kinoshita K, Fagarasan S, Yamada S, Shinkai Y, Honjo T. 2000. Class switch recombination and hypermuta-tion require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme. Cell 102: 553-563.
    • (2000) Cell , vol.102 , pp. 553-563
    • Muramatsu, M.1    Kinoshita, K.2    Fagarasan, S.3    Yamada, S.4    Shinkai, Y.5    Honjo, T.6
  • 72
    • 84859265962 scopus 로고    scopus 로고
    • Active DNA demethylation by Gadd45 and DNA repair
    • Niehrs C, Schäfer A. 2012. Active DNA demethylation by Gadd45 and DNA repair. Trends Cell Biol 22: 220-227.
    • (2012) Trends Cell Biol , vol.22 , pp. 220-227
    • Niehrs, C.1    Schäfer, A.2
  • 74
    • 75749142980 scopus 로고    scopus 로고
    • A role for the elongator complex in zygotic paternal genome demethylation
    • Okada Y, Yamagata K, Hong K, Wakayama T, Zhang Y.2010. A role for the elongator complex in zygotic paternal genome demethylation. Nature 463: 554-558.
    • (2010) Nature , vol.463 , pp. 554-558
    • Okada, Y.1    Yamagata, K.2    Hong, K.3    Wakayama, T.4    Zhang, Y.5
  • 75
    • 0031279892 scopus 로고    scopus 로고
    • The pre-implantation ontogeny of the H19 methylation imprint
    • Olek A, Walter J. 1997. The pre-implantation ontogeny of the H19 methylation imprint. Nat Genet 17: 275-276.
    • (1997) Nat Genet , vol.17 , pp. 275-276
    • Olek, A.1    Walter, J.2
  • 77
    • 0033566129 scopus 로고    scopus 로고
    • The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins
    • Orphanides G, Wu WH, Lane WS, Hampsey M, Reinberg D. 1999. The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins. Nature 400: 284-288.
    • (1999) Nature , vol.400 , pp. 284-288
    • Orphanides, G.1    Wu, W.H.2    Lane, W.S.3    Hampsey, M.4    Reinberg, D.5
  • 81
    • 77954938544 scopus 로고    scopus 로고
    • Methylation-independent DNA binding modulates specificity of Repressor of Silencing 1 (ROS1) and facilitates demethylation in long substrates
    • Ponferrada-Marín MI, Martínez-Macías MI, Morales-Ruiz T, Roldán-Arjona T, Ariza RR. 2010. Methylation-independent DNA binding modulates specificity of Repressor of Silencing 1 (ROS1) and facilitates demethylation in long substrates. J Biol Chem 285: 23032-23039.
    • (2010) J Biol Chem , vol.285 , pp. 23032-23039
    • Ponferrada-Marín, M.I.1    Martínez-Macías, M.I.2    Morales-Ruiz, T.3    Roldán-Arjona, T.4    Ariza, R.R.5
  • 83
    • 77249148019 scopus 로고    scopus 로고
    • Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
    • Popp C, Dean W, Feng S, Cokus SJ, Andrews S, Pellegrini M, Jacobsen SE, Reik W. 2010. Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency. Nature 463: 1101-1105.
    • (2010) Nature , vol.463 , pp. 1101-1105
    • Popp, C.1    Dean, W.2    Feng, S.3    Cokus, S.J.4    Andrews, S.5    Pellegrini, M.6    Jacobsen, S.E.7    Reik, W.8
  • 84
  • 85
    • 57649196594 scopus 로고    scopus 로고
    • DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45
    • Rai K, Huggins IJ, James SR, Karpf AR, Jones DA, Cairns BR. 2008. DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45. Cell 135: 1201-1212.
    • (2008) Cell , vol.135 , pp. 1201-1212
    • Rai, K.1    Huggins, I.J.2    James, S.R.3    Karpf, A.R.4    Jones, D.A.5    Cairns, B.R.6
  • 86
    • 0034625064 scopus 로고    scopus 로고
    • Non-CpG methylation is prevalent in embryonic stem cells and maybemediated by DNA methyltrans-ferase 3a
    • Ramsahoye BH, Biniszkiewicz D, Lyko F, Clark V, Bird AP, Jaenisch R. 2000. Non-CpG methylation is prevalent in embryonic stem cells and maybemediated by DNA methyltrans-ferase 3a. Proc Natl Acad Sci 97: 5237-5242.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 5237-5242
    • Ramsahoye, B.H.1    Biniszkiewicz, D.2    Lyko, F.3    Clark, V.4    Bird, A.P.5    Jaenisch, R.6
  • 87
    • 34548458560 scopus 로고    scopus 로고
    • Maintenance of paternal methylation and repression of the imprinted H19 gene requires MBD3
    • Reese KJ, Lin S, Verona RI, Schultz RM, Bartolomei MS. 2007. Maintenance of paternal methylation and repression of the imprinted H19 gene requires MBD3. PLoS Genet 3: e137.
    • (2007) PLoS Genet , vol.3
    • Reese, K.J.1    Lin, S.2    Verona, R.I.3    Schultz, R.M.4    Bartolomei, M.S.5
  • 89
    • 0036145567 scopus 로고    scopus 로고
    • Dynamic repro-gramming of DNA methylation in the early mouse embryo
    • Santos F, Hendrich B, Reik W, Dean W. 2002. Dynamic repro-gramming of DNA methylation in the early mouse embryo. Dev Biol 241: 172-182.
    • (2002) Dev Biol , vol.241 , pp. 172-182
    • Santos, F.1    Hendrich, B.2    Reik, W.3    Dean, W.4
  • 90
    • 38549116060 scopus 로고    scopus 로고
    • Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana
    • Saze H, Shiraishi A, Miura A, Kakutani T. 2008. Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana. Science 319: 462-465.
    • (2008) Science , vol.319 , pp. 462-465
    • Saze, H.1    Shiraishi, A.2    Miura, A.3    Kakutani, T.4
  • 93
    • 0037663448 scopus 로고    scopus 로고
    • Drosophila FACT contributesto Hox gene expression through physical and functional interactions with GAGA factor
    • Shimojima T, Okada M, Nakayama T, Ueda H, Okawa K, Iwamatsu A, Handa H, Hirose S. 2003. Drosophila FACT contributesto Hox gene expression through physical and functional interactions with GAGA factor. Genes Dev 17: 1605-1616.
    • (2003) Genes Dev , vol.17 , pp. 1605-1616
    • Shimojima, T.1    Okada, M.2    Nakayama, T.3    Ueda, H.4    Okawa, K.5    Iwamatsu, A.6    Handa, H.7    Hirose, S.8
  • 95
    • 43749098985 scopus 로고    scopus 로고
    • DNA methylation landscapes: Provocative insights from epigenomics
    • Suzuki MM, Bird A. 2008. DNA methylation landscapes: Provocative insights from epigenomics. Nat Rev Genet 9: 465-476.
    • (2008) Nat Rev Genet , vol.9 , pp. 465-476
    • Suzuki, M.M.1    Bird, A.2
  • 96
    • 84861968669 scopus 로고    scopus 로고
    • TGF-b-dependent active demeth-ylation and expression of the p15(ink4b) tumor suppressor are impaired by the ZNF217/CoREST complex
    • Thillainadesan G, Chitilian JM, Isovic M, Ablack JN, Mymryk JS, Tini M, Torchia J. 2012. TGF-b-dependent active demeth-ylation and expression of the p15(ink4b) tumor suppressor are impaired by the ZNF217/CoREST complex. Mol Cell 46: 636-649.
    • (2012) Mol Cell , vol.46 , pp. 636-649
    • Thillainadesan, G.1    Chitilian, J.M.2    Isovic, M.3    Ablack, J.N.4    Mymryk, J.S.5    Tini, M.6    Torchia, J.7
  • 97
    • 0036184090 scopus 로고    scopus 로고
    • Association of CBP/p300 acetylase and thymine DNA glycosylase links DNA repair and transcription
    • Tini M, Benecke A, Um SJ, Torchia J, Evans RM, Chambon P. 2002. Association of CBP/p300 acetylase and thymine DNA glycosylase links DNA repair and transcription. Mol Cell 9: 265-277.
    • (2002) Mol Cell , vol.9 , pp. 265-277
    • Tini, M.1    Benecke, A.2    Um, S.J.3    Torchia, J.4    Evans, R.M.5    Chambon, P.6
  • 98
    • 0032516887 scopus 로고    scopus 로고
    • Retinoic acid receptors interact physically and functionally with the T:G mismatch-specific thymine-DNA glycosy-lase
    • Um S, Harbers M, Benecke A, Pierrat B, Losson R, Chambon P. 1998. Retinoic acid receptors interact physically and functionally with the T:G mismatch-specific thymine-DNA glycosy-lase. J Biol Chem 273: 20728-20736.
    • (1998) J Biol Chem , vol.273 , pp. 20728-20736
    • Um, S.1    Harbers, M.2    Benecke, A.3    Pierrat, B.4    Losson, R.5    Chambon, P.6
  • 99
    • 33847055935 scopus 로고    scopus 로고
    • Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1
    • Valinluck V, Sowers LC. 2007. Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1. Cancer Res 67: 946-950.
    • (2007) Cancer Res , vol.67 , pp. 946-950
    • Valinluck, V.1    Sowers, L.C.2
  • 102
    • 84555189745 scopus 로고    scopus 로고
    • DNA methylation: TET proteins-guardians of CpG islands?
    • Williams K, Christensen J, Helin K. 2011. DNA methylation: TET proteins-guardians of CpG islands? EMBO Rep 13: 28-35.
    • (2011) EMBO Rep , vol.13 , pp. 28-35
    • Williams, K.1    Christensen, J.2    Helin, K.3
  • 103
    • 77956095231 scopus 로고    scopus 로고
    • Active DNA demethylation: Many roads lead to Rome
    • Wu SC, Zhang Y. 2010. Active DNA demethylation: Many roads lead to Rome. Nat Rev Mol Cell Biol 11: 607-620.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 607-620
    • Wu, S.C.1    Zhang, Y.2
  • 104
    • 33847275530 scopus 로고    scopus 로고
    • Nuclear reprogramming of cloned embryos and its implications for therapeutic cloning
    • Yang X, Smith SL, Tian XC, Lewin HA, Renard JP, Wakayama T. 2007. Nuclear reprogramming of cloned embryos and its implications for therapeutic cloning. Nat Genet 39: 295-302.
    • (2007) Nat Genet , vol.39 , pp. 295-302
    • Yang, X.1    Smith, S.L.2    Tian, X.C.3    Lewin, H.A.4    Renard, J.P.5    Wakayama, T.6
  • 105
    • 79955120337 scopus 로고    scopus 로고
    • RNA-directed DNA methylation
    • Zhang H, Zhu JK. 2011. RNA-directed DNA methylation. Curr Opin Plant Biol 14: 142-147.
    • (2011) Curr Opin Plant Biol , vol.14 , pp. 142-147
    • Zhang, H.1    Zhu, J.K.2
  • 109
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu JK. 2009. Active DNA demethylation mediated by DNA glycosylases. Annu Rev Genet 43: 143-166.
    • (2009) Annu Rev Genet , vol.43 , pp. 143-166
    • Zhu, J.K.1
  • 110
    • 0034625141 scopus 로고    scopus 로고
    • 5-methylcytosine-DNA glycosylase activity is present in a cloned G/T mismatch DNA glycosyl-ase associated with the chicken embryo DNA demethylation complex
    • Zhu B, Zheng Y, Hess D, Angliker H, Schwarz S, Siegmann M, Thiry S, Jost JP. 2000a. 5-methylcytosine-DNA glycosylase activity is present in a cloned G/T mismatch DNA glycosyl-ase associated with the chicken embryo DNA demethylation complex. Proc Natl Acad Sci 97: 5135-5139.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 5135-5139
    • Zhu, B.1    Zheng, Y.2    Hess, D.3    Angliker, H.4    Schwarz, S.5    Siegmann, M.6    Thiry, S.7    Jost, J.P.8
  • 111
    • 0034326849 scopus 로고    scopus 로고
    • 5-Methylcytosine DNA glycosylase activity is also present in the human MBD4 (G/T mismatch glycosylase) and in a related avian sequence
    • Zhu B, Zheng Y, Angliker H, Schwarz S, Thiry S, Siegmann M, Jost JP. 2000b. 5-Methylcytosine DNA glycosylase activity is also present in the human MBD4 (G/T mismatch glycosylase) and in a related avian sequence. Nucleic Acids Res 28: 4157-4165.
    • (2000) Nucleic Acids Res , vol.28 , pp. 4157-4165
    • Zhu, B.1    Zheng, Y.2    Angliker, H.3    Schwarz, S.4    Thiry, S.5    Siegmann, M.6    Jost, J.P.7
  • 112
    • 0035942193 scopus 로고    scopus 로고
    • Overexpression of 5-methylcytosine DNA glycosylase in human embryonic kidney cells EcR293 de-methylates the promoter of a hormone-regulated reporter gene
    • Zhu B, Benjamin D, Zheng Y, Angliker H, Thiry S, Siegmann M, Jost JP. 2001. Overexpression of 5-methylcytosine DNA glycosylase in human embryonic kidney cells EcR293 de-methylates the promoter of a hormone-regulated reporter gene. Proc Natl Acad Sci 98: 5031-5036.
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 5031-5036
    • Zhu, B.1    Benjamin, D.2    Zheng, Y.3    Angliker, H.4    Thiry, S.5    Siegmann, M.6    Jost, J.P.7
  • 113
    • 33845866061 scopus 로고    scopus 로고
    • The DNA glycosylase/lyase ROS1 functions in pruning DNA methyl-ation patterns in Arabidopsis
    • Zhu J, Kapoor A, Sridhar VV, Agius F, Zhu JK. 2007. The DNA glycosylase/lyase ROS1 functions in pruning DNA methyl-ation patterns in Arabidopsis. Curr Biol 17: 54-59.
    • (2007) Curr Biol , vol.17 , pp. 54-59
    • Zhu, J.1    Kapoor, A.2    Sridhar, V.V.3    Agius, F.4    Zhu, J.K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.