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Volumn 77, Issue , 2012, Pages 23-29

Hypothesis: Selection of imprinted genes is driven by silencing deleterious gene activity in somatic tissues

Author keywords

[No Author keywords available]

Indexed keywords

POLYCOMB REPRESSIVE COMPLEX 2; UBIQUITIN PROTEIN LIGASE E3;

EID: 84881495324     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.2012.77.014514     Document Type: Article
Times cited : (19)

References (66)
  • 1
    • 64949087699 scopus 로고    scopus 로고
    • Salicylic acid deficiency in NahG transgenic lines and sid2 mutants increases seed yield in the annual plant Arabidopsis thaliana
    • Abreu ME, Munne-Bosch S. 2009. Salicylic acid deficiency in NahG transgenic lines and sid2 mutants increases seed yield in the annual plant Arabidopsis thaliana. J Exp Bot 60:1261-1271.
    • (2009) J Exp Bot , vol.60 , pp. 1261-1271
    • Abreu, M.E.1    Munne-Bosch, S.2
  • 2
    • 70349104647 scopus 로고    scopus 로고
    • Genomic imprinting:Employing and avoiding epigenetic processes
    • Bartolomei MS. 2009. Genomic imprinting:Employing and avoiding epigenetic processes. Genes Dev 23:2124-2133.
    • (2009) Genes Dev , vol.23 , pp. 2124-2133
    • Bartolomei, M.S.1
  • 3
    • 70349565235 scopus 로고    scopus 로고
    • Parental memories shape seeds
    • Berger F, Chaudhury A. 2009. Parental memories shape seeds. Trends Plant Sci 14:550-556.
    • (2009) Trends Plant , vol.14 , pp. 550-556
    • Berger, F.1    Chaudhury, A.2
  • 5
    • 34547661514 scopus 로고    scopus 로고
    • Arabidopsis JAGGED LATERAL ORGANS is expressed in boundaries and coordinates KNOX and PIN activity
    • Borghi L, Bureau M, Simon R. 2007. Arabidopsis JAGGED LATERAL ORGANS is expressed in boundaries and coordinates KNOX and PIN activity. Plant Cell 19:1795-1808.
    • (2007) Plant Cell , vol.19 , pp. 1795-1808
    • Borghi, L.1    Bureau, M.2    Simon, R.3
  • 6
    • 0038459120 scopus 로고    scopus 로고
    • A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis
    • Brown RL, Kazan K, McGrath KC, Maclean DJ, Manners JM. 2003. A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis. Plant Physiol 132:1020-1032.
    • (2003) Plant Physiol , vol.132 , pp. 1020-1032
    • Brown, R.L.1    Kazan, K.2    McGrath, K.C.3    Maclean, D.J.4    Manners, J.M.5
  • 8
    • 33847693583 scopus 로고    scopus 로고
    • Genomic imprinting, growth control and the allocation of nutritional resources:Consequences for postnatal life
    • Charalambous M, da Rocha ST, Ferguson-Smith AC. 2007. Genomic imprinting, growth control and the allocation of nutritional resources:Consequences for postnatal life. Curr Opin Endocrinol Diabetes Obes 14:3-12.
    • (2007) Curr Opin Endocrinol Diabetes Obes , vol.14 , pp. 3-12
    • Charalambous, M.1    da Rocha, S.T.2    Ferguson-Smith, A.C.3
  • 11
    • 34648836740 scopus 로고    scopus 로고
    • Parental conflict does not necessarily lead to the evolution of imprinting
    • de Jong TJ, Scott RJ. 2007. Parental conflict does not necessarily lead to the evolution of imprinting. Trends Plant Sci 12:439-443.
    • (2007) Trends Plant Sci , vol.12 , pp. 439-443
    • de Jong, T.J.1    Scott, R.J.2
  • 12
    • 34047093266 scopus 로고    scopus 로고
    • Convergent evolution of genomic imprinting in plants and mammals
    • Feil R, Berger F. 2007. Convergent evolution of genomic imprinting in plants and mammals. Trends Genet 23:192-199.
    • (2007) Trends Genet , vol.23 , pp. 192-199
    • Feil, R.1    Berger, F.2
  • 13
    • 79960530899 scopus 로고    scopus 로고
    • Genomic imprinting:The emergence of an epigenetic paradigm
    • Ferguson-Smith AC. 2011. Genomic imprinting:The emergence of an epigenetic paradigm. Nat Rev Genet 12:565-575.
    • (2011) Nat Rev Genet , vol.12 , pp. 565-575
    • Ferguson-Smith, A.C.1
  • 14
    • 70350138341 scopus 로고    scopus 로고
    • Polycomb group-dependent imprinting of the actin regulator AtFH5 regulates morphogenesis in Arabidopsis thaliana
    • Fitz Gerald JN, Hui PS, Berger F. 2009. Polycomb group-dependent imprinting of the actin regulator AtFH5 regulates morphogenesis in Arabidopsis thaliana. Development 136:3399-3404.
    • (2009) Development , vol.136 , pp. 3399-3404
    • Fitz Gerald, J.N.1    Hui, P.S.2    Berger, F.3
  • 16
    • 2942651120 scopus 로고    scopus 로고
    • Imprinting and seed development
    • Gehring M, Choi Y, Fischer RL. 2004. Imprinting and seed development. Plant Cell 16 Suppl:S203-S213.
    • (2004) Plant Cel , vol.16 SUPPL
    • Gehring, M.1    Choi, Y.2    Fischer, R.L.3
  • 17
    • 80051745935 scopus 로고    scopus 로고
    • Genomic Analysis of Parent-of-Origin Allelic Expression in Arabidopsis thaliana Seeds
    • Gehring M, Missirian V, Henikoff S. 2011. Genomic Analysis of Parent-of-Origin Allelic Expression in Arabidopsis thaliana Seeds. PLoS One 6:e23687.
    • (2011) PLoS One , vol.6
    • Gehring, M.1    Missirian, V.2    Henikoff, S.3
  • 18
    • 8544235964 scopus 로고    scopus 로고
    • Genomic imprinting and kinship:How good is the evidence?
    • Haig D. 2004. Genomic imprinting and kinship:How good is the evidence? Annu Rev Genet 38:553-585.
    • (2004) Annu Rev Genet , vol.38 , pp. 553-585
    • Haig, D.1
  • 19
    • 33646554467 scopus 로고    scopus 로고
    • Sexual conflict and the alternation of haploid and diploid generations
    • Haig D, Wilczek A. 2006. Sexual conflict and the alternation of haploid and diploid generations. Philos Trans R Soc Lond B Biol Sci 361:335-343.
    • (2006) Philos Trans R Soc Lond B Biol Sci , vol.361 , pp. 335-343
    • Haig, D.1    Wilczek, A.2
  • 22
    • 45349108094 scopus 로고    scopus 로고
    • Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading
    • Henderson IR, Jacobsen SE. 2008. Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading. Genes Dev 22:1597-1606.
    • (2008) Genes Dev , vol.22 , pp. 1597-1606
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 23
    • 69449097106 scopus 로고    scopus 로고
    • Diversity of Polycomb group complexes in plants: Same rules, different players?
    • Hennig L, Derkacheva M. 2009. Diversity of Polycomb group complexes in plants: Same rules, different players? Trends Genet 25:414-423.
    • (2009) Trends Genet , vol.25 , pp. 414-123
    • Hennig, L.1    Derkacheva, M.2
  • 25
    • 84855268563 scopus 로고    scopus 로고
    • Polycomb group complexes mediate developmental transitionsinplants
    • Holec S, Berger F. 2012. Polycomb group complexes mediate developmental transitionsinplants. Plant Physiol 158:35-43.
    • (2012) Plant Physiol , vol.158 , pp. 35-43
    • Holec, S.1    Berger, F.2
  • 27
    • 33847177329 scopus 로고    scopus 로고
    • Molecular basis of late-flowering phenotype caused by dominant epialleles of the FWA locus in Arabidopsis
    • Ikeda Y, Kobayashi Y, Yamaguchi A, Abe M, Araki T. 2007. Molecular basis of late-flowering phenotype caused by dominant epialleles of the FWA locus in Arabidopsis. Plant Cell Physiol 48:205-220.
    • (2007) Plant Cell Physiol , vol.48 , pp. 205-220
    • Ikeda, Y.1    Kobayashi, Y.2    Yamaguchi, A.3    Abe, M.4    Araki, T.5
  • 28
    • 20444503961 scopus 로고    scopus 로고
    • Polycomb group genes control developmental timing of endosperm
    • Ingouff M, Haseloff J, Berger F. 2005. Polycomb group genes control developmental timing of endosperm. Plant J 42:663-674.
    • (2005) Plant J , vol.42 , pp. 663-674
    • Ingouff, M.1    Haseloff, J.2    Berger, F.3
  • 30
    • 84867405328 scopus 로고    scopus 로고
    • DNA Methylation Dynamics during Sexual Reproduction in Arabidopsis thaliana
    • Jullien PE, Susaki D, Yelagandula R, Higashiyama T, Berger F. 2012. DNA Methylation Dynamics during Sexual Reproduction in Arabidopsis thaliana. Curr Biol 22:1825-1830.
    • (2012) Curr Biol , vol.22 , pp. 1825-1830
    • Jullien, P.E.1    Susaki, D.2    Yelagandula, R.3    Higashiyama, T.4    Berger, F.5
  • 31
    • 77954933966 scopus 로고    scopus 로고
    • Retrotransposon silencing by DNA methylation contributed to the evolution of placentation and genomic imprinting in mammals
    • Kaneko-Ishino T, Ishino F. 2011. Retrotransposon silencing by DNA methylation contributed to the evolution of placentation and genomic imprinting in mammals. Dev Growth Differ 52:533-543.
    • (2011) Dev Growth Differ , vol.52 , pp. 533-543
    • Kaneko-Ishino, T.1    Ishino, F.2
  • 32
    • 35549011073 scopus 로고    scopus 로고
    • High diversity due to balancing selection in the promoter region of the Medea gene in Arabidopsis lyrata
    • Kawabe A, Fujimoto R, Charlesworth D. 2007. High diversity due to balancing selection in the promoter region of the Medea gene in Arabidopsis lyrata. Curr Biol 17:1885-1889.
    • (2007) Curr Biol , vol.17 , pp. 1885-1889
    • Kawabe, A.1    Fujimoto, R.2    Charlesworth, D.3
  • 33
    • 77953810578 scopus 로고    scopus 로고
    • Mechanisms and evolution of genomic imprinting in plants
    • Kohler C, Weinhofer-Molisch I. 2011. Mechanisms and evolution of genomic imprinting in plants. Heredity 105:57-63.
    • (2011) Heredity , vol.105 , pp. 57-63
    • Kohler, C.1    Weinhofer-Molisch, I.2
  • 35
    • 84862519067 scopus 로고    scopus 로고
    • Endosperm:Food for humankind and fodder for scientific discoveries
    • Li J, Berger F. 2012. Endosperm:Food for humankind and fodder for scientific discoveries. New Phytol 195:290-305.
    • (2012) New Phytol , vol.195 , pp. 290-305
    • Li, J.1    Berger, F.2
  • 36
    • 79959308466 scopus 로고    scopus 로고
    • Over-expression of AtBMI1C, a Polycomb group protein gene, accelerates flowering in Arabidopsis
    • Li W, Wang Z, Li J, Yang H, Cui S, Wang X, Ma L. 2011. Over-expression of AtBMI1C, a Polycomb group protein gene, accelerates flowering in Arabidopsis. PLoS One 6:e21364.
    • (2011) PLoS One , vol.6
    • Li, W.1    Wang, Z.2    Li, J.3    Yang, H.4    Cui, S.5    Wang, X.6    Ma, L.7
  • 37
    • 0034641701 scopus 로고    scopus 로고
    • Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds
    • Luo M, Bilodeau P, Dennis ES, Peacock WJ, Chaudhury A. 2000. Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds. Proc Natl Acad Sci 97:10637-10642.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 10637-10642
    • Luo, M.1    Bilodeau, P.2    Dennis, E.S.3    Peacock, W.J.4    Chaudhury, A.5
  • 38
    • 79959818388 scopus 로고    scopus 로고
    • A genome-wide survey of imprinted genes in rice seeds reveals imprinting primarily occurs in the endosperm
    • Luo M, Taylor JM, Spriggs A, Zhang H, Wu X, Russell S, Singh M, Koltunow A. 2011. A genome-wide survey of imprinted genes in rice seeds reveals imprinting primarily occurs in the endosperm. PLoS Genet 7:e1002125.
    • (2011) PLoS Genet , vol.7
    • Luo, M.1    Taylor, J.M.2    Spriggs, A.3    Zhang, H.4    Wu, X.5    Russell, S.6    Singh, M.7    Koltunow, A.8
  • 43
    • 62349092322 scopus 로고    scopus 로고
    • Possible diversifying selection in the imprinted gene, MEDEA, in Arabidopsis
    • Miyake T, Takebayashi N, Wolf DE. 2009. Possible diversifying selection in the imprinted gene, MEDEA, in Arabidopsis. Mol Biol Evol 26:843-857.
    • (2009) Mol Biol Evol , vol.26 , pp. 843-857
    • Miyake, T.1    Takebayashi, N.2    Wolf, D.E.3
  • 44
    • 84856473900 scopus 로고    scopus 로고
    • Maternal and paternal genomes contribute equally to the transcriptome of early plant embryos
    • Nodine MD, Bartel DP. 2011. Maternal and paternal genomes contribute equally to the transcriptome of early plant embryos. Nature 482:94-97.
    • (2011) Nature , vol.482 , pp. 94-97
    • Nodine, M.D.1    Bartel, D.P.2
  • 45
    • 14844323069 scopus 로고    scopus 로고
    • An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors
    • Okamura K, Yamada Y, Sakaki Y, Ito T. 2004.An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors. DNA Res 11:381-390.
    • (2004) DNA Res , vol.11 , pp. 381-390
    • Okamura, K.1    Yamada, Y.2    Sakaki, Y.3    Ito, T.4
  • 47
  • 48
    • 34547747862 scopus 로고    scopus 로고
    • Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1
    • Saze H, Kakutani T. 2007. Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1. EMBO J 26:3641-3652.
    • (2007) EMBO J , vol.26 , pp. 3641-3652
    • Saze, H.1    Kakutani, T.2
  • 50
    • 3142766061 scopus 로고    scopus 로고
    • Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene
    • Serrano M, Guzman P. 2004. Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene. Genetics 167:919-929.
    • (2004) Genetics , vol.167 , pp. 919-929
    • Serrano, M.1    Guzman, P.2
  • 52
    • 57749121487 scopus 로고    scopus 로고
    • MATERNALLY EXPRESSED PAB C-TERMINAL, a novel imprinted gene in Arabidopsis, encodes the conserved C-terminal domain of polyadenylate binding proteins
    • Tiwari S, Schulz R, Ikeda Y, Dytham L, Bravo J, Mathers L, Spielman M, Guzman P, Oakey RJ, Kinoshita T, et al. 2008. MATERNALLY EXPRESSED PAB C-TERMINAL, a novel imprinted gene in Arabidopsis, encodes the conserved C-terminal domain of polyadenylate binding proteins. Plant Cell 20:2387-2398.
    • (2008) Plant Cell , vol.20 , pp. 2387-2398
    • Tiwari, S.1    Schulz, R.2    Ikeda, Y.3    Dytham, L.4    Bravo, J.5    Mathers, L.6    Spielman, M.7    Guzman, P.8    Oakey, R.J.9    Kinoshita, T.10
  • 53
    • 34848862124 scopus 로고    scopus 로고
    • SAR increases fitness of Arabidopsis thaliana in the presence of natural bacterial pathogens
    • Traw MB, Kniskern JM, Bergelson J. 2007. SAR increases fitness of Arabidopsis thaliana in the presence of natural bacterial pathogens. Evolution 61:2444-2449.
    • (2007) Evolution , vol.61 , pp. 2444-2449
    • Traw, M.B.1    Kniskern, J.M.2    Bergelson, J.3
  • 55
    • 0141960164 scopus 로고    scopus 로고
    • The potential role of gene duplications in the evolution of imprinting mechanisms
    • Walter J, Paulsen M. 2003. The potential role of gene duplications in the evolution of imprinting mechanisms. Hum Mol Genet 12 Spec No 2:R215-R220.
    • (2003) Hum Mol Genet , vol.2
    • Walter, J.1    Paulsen, M.2
  • 57
    • 78449265382 scopus 로고    scopus 로고
    • H3K27me3 profiling of the endosperm implies exclusion of Polycomb group protein targeting by DNA methylation
    • Weinhofer I, Hehenberger E, Roszak P, Hennig L, Kohler C. 2011. H3K27me3 profiling of the endosperm implies exclusion of Polycomb group protein targeting by DNA methylation. PLoS Genet 6:e1001152.
    • (2011) PLoS Genet , vol.6
    • Weinhofer, I.1    Hehenberger, E.2    Roszak, P.3    Hennig, L.4    Kohler, C.5
  • 58
    • 19444361995 scopus 로고    scopus 로고
    • Genomic imprinting and methylation:Epigenetic canalization and conflict
    • Wilkins JF. 2005. Genomic imprinting and methylation:Epigenetic canalization and conflict. Trends Genet 21:356-365.
    • (2005) Trends Genet , vol.21 , pp. 356-365
    • Wilkins, J.F.1
  • 59
    • 0038407464 scopus 로고    scopus 로고
    • What good is genomic imprinting:The function of parent-specific gene expression
    • Wilkins JF, Haig D. 2003. What good is genomic imprinting:The function of parent-specific gene expression. Nat Rev Genet 4:359-368.
    • (2003) Nat Rev Genet , vol.4 , pp. 359-368
    • Wilkins, J.F.1    Haig, D.2
  • 61
    • 84856232863 scopus 로고    scopus 로고
    • Epigenetic reprogramming during plant reproduction and seed development
    • Wollmann H, Berger F. 2012. Epigenetic reprogramming during plant reproduction and seed development. Curr Opin Plant Biol 15:63-69.
    • (2012) Curr Opin Plant Biol , vol.15 , pp. 63-69
    • Wollmann, H.1    Berger, F.2
  • 62
    • 55249124774 scopus 로고    scopus 로고
    • Activation of MAPK kinase 9 induces ethylene and camalexin biosynthesis and enhances sensitivity to salt stress in Arabidopsis
    • Xu J, Li Y, Wang Y, Liu H, Lei L, Yang H, Liu G, Ren D. 2008. Activation of MAPK kinase 9 induces ethylene and camalexin biosynthesis and enhances sensitivity to salt stress in Arabidopsis. J Biol Chem 283:26996-27006.
    • (2008) J Biol Chem , vol.283 , pp. 26996-27006
    • Xu, J.1    Li, Y.2    Wang, Y.3    Liu, H.4    Lei, L.5    Yang, H.6    Liu, G.7    Ren, D.8
  • 63
    • 84862505414 scopus 로고    scopus 로고
    • Over-expression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis
    • Yang H, Mo H, Fan D, Cao Y, Cui S, Ma L. 2012. Over-expression of a histone H3K4 demethylase, JMJ15, accelerates flowering time in Arabidopsis. Plant Cell Rep 31:1297-1308.
    • (2012) Plant Cell Rep , vol.31 , pp. 1297-1308
    • Yang, H.1    Mo, H.2    Fan, D.3    Cao, Y.4    Cui, S.5    Ma, L.6
  • 64
    • 33747188681 scopus 로고    scopus 로고
    • Overexpression of AGAMOUS-LIKE 28 (AGL28) promotes flowering by upregulating expression of floral promoters within the autonomous pathway
    • Yoo SK, Lee JS, Ahn JH. 2006. Overexpression of AGAMOUS-LIKE 28 (AGL28) promotes flowering by upregulating expression of floral promoters within the autonomous pathway. Biochem Biophys Res Commun 348:929-936.
    • (2006) Biochem Biophys Res Commun , vol.348 , pp. 929-936
    • Yoo, S.K.1    Lee, J.S.2    Ahn, J.H.3
  • 65
    • 77957325042 scopus 로고    scopus 로고
    • Plant immunity triggered by microbial molecular signatures
    • Zhang J, Zhou JM. 2010. Plant immunity triggered by microbial molecular signatures. Mol Plant 3:783-793.
    • (2010) Mol Plant , vol.3 , pp. 783-793
    • Zhang, J.1    Zhou, J.M.2
  • 66
    • 84055178968 scopus 로고    scopus 로고
    • Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm
    • Zhang M, Zhao H, Xie S, Chen J, Xu Y, Wang K, Zhao H, Guan H, Hu X, Jiao Y, et al. 2011. Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm. Proc Natl Acad Sci 108:20042-20047.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 20042-20047
    • Zhang, M.1    Zhao, H.2    Xie, S.3    Chen, J.4    Xu, Y.5    Wang, K.6    Zhao, H.7    Guan, H.8    Hu, X.9    Jiao, Y.10


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