메뉴 건너뛰기




Volumn 40, Issue 12, 2013, Pages 4477-4482

Accurate sex identification of ancient human remains using DNA shotgun sequencing

Author keywords

Ancient DNA; DNA analysis; Genomics; Sex identification; Shotgun sequencing

Indexed keywords

BIOMARKER; CHROMOSOME; DNA; GENETIC ANALYSIS; GENOMICS; HYPOTHESIS TESTING; IDENTIFICATION METHOD; MORPHOLOGY; SOCIAL STRUCTURE;

EID: 84881242231     PISSN: 03054403     EISSN: 10959238     Source Type: Journal    
DOI: 10.1016/j.jas.2013.07.004     Document Type: Article
Times cited : (300)

References (57)
  • 1
    • 84975795680 scopus 로고    scopus 로고
    • An integrated map of genetic variation from 1,092 human genomes
    • 1000 genomes project consortium
    • 1000 genomes project consortium An integrated map of genetic variation from 1,092 human genomes. Nature 2012, 491:56-65.
    • (2012) Nature , vol.491 , pp. 56-65
  • 2
    • 77953131993 scopus 로고    scopus 로고
    • Sexual dimorphism in deciduous crown traits of a European derived Australian sample
    • Adler C.J., Donlon D. Sexual dimorphism in deciduous crown traits of a European derived Australian sample. Forensic Science International 2010, 199:29-37.
    • (2010) Forensic Science International , vol.199 , pp. 29-37
    • Adler, C.J.1    Donlon, D.2
  • 4
    • 0017889888 scopus 로고
    • Sexual dimorphism in tooth-crown diameters of deciduous teeth
    • Black T.K. Sexual dimorphism in tooth-crown diameters of deciduous teeth. American Journal of Physical Anthropology 1978, 48:77-82.
    • (1978) American Journal of Physical Anthropology , vol.48 , pp. 77-82
    • Black, T.K.1
  • 5
    • 0017797352 scopus 로고
    • Anew method for assessing the sex of fragmentary skeletal remains in femoral shaft circumference
    • Black T.K. Anew method for assessing the sex of fragmentary skeletal remains in femoral shaft circumference. American Journal of Physical Anthropology 1978, 48:227-231.
    • (1978) American Journal of Physical Anthropology , vol.48 , pp. 227-231
    • Black, T.K.1
  • 7
    • 34247350786 scopus 로고    scopus 로고
    • Evaluation of Purkait's triangle method for determining sexual dimorphism
    • Brown R.P., Ubelaker D.H., Schanfield M.S. Evaluation of Purkait's triangle method for determining sexual dimorphism. Journal of Forensic Sciences 2007, 52(3):553-556.
    • (2007) Journal of Forensic Sciences , vol.52 , Issue.3 , pp. 553-556
    • Brown, R.P.1    Ubelaker, D.H.2    Schanfield, M.S.3
  • 8
    • 35748972623 scopus 로고    scopus 로고
    • Sample-specific (universal) metric approaches for determining the sex of immature human skeletal remains using permanent tooth dimensions
    • Cardoso H.F.V. Sample-specific (universal) metric approaches for determining the sex of immature human skeletal remains using permanent tooth dimensions. Journal of Archaeological Science 2008, 35:158-168.
    • (2008) Journal of Archaeological Science , vol.35 , pp. 158-168
    • Cardoso, H.F.V.1
  • 9
    • 43049092959 scopus 로고    scopus 로고
    • Two arch criteria of the ilium for sex determination of immature skeletal remains: a test of their accuracy and an assessment of intra- and inter-observer error
    • Cardoso H.F.V., Saunders S.R. Two arch criteria of the ilium for sex determination of immature skeletal remains: a test of their accuracy and an assessment of intra- and inter-observer error. Forensic Science International 2008, 178:24-29.
    • (2008) Forensic Science International , vol.178 , pp. 24-29
    • Cardoso, H.F.V.1    Saunders, S.R.2
  • 10
    • 79954629781 scopus 로고    scopus 로고
    • Further developments in molecular sex assignment: a blind test of 18th and 19th century human skeletons
    • Daskalaki E., Anderung C., Humphrey L., Götherström A. Further developments in molecular sex assignment: a blind test of 18th and 19th century human skeletons. Journal of Archaeological Science 2011, 38(6):1326-1330.
    • (2011) Journal of Archaeological Science , vol.38 , Issue.6 , pp. 1326-1330
    • Daskalaki, E.1    Anderung, C.2    Humphrey, L.3    Götherström, A.4
  • 12
    • 0029558955 scopus 로고
    • Sex identification of archaeological human remains based on amplification of the X and Y amelogenin alleles
    • Faerman M., Filon D., Kahila G., Greenblatt C.L., Smith P., Oppenheim A. Sex identification of archaeological human remains based on amplification of the X and Y amelogenin alleles. Gene 1995, 167:327-332.
    • (1995) Gene , vol.167 , pp. 327-332
    • Faerman, M.1    Filon, D.2    Kahila, G.3    Greenblatt, C.L.4    Smith, P.5    Oppenheim, A.6
  • 14
    • 2942639093 scopus 로고
    • Description of the human skeleton from the graves and some associated animal bones
    • Stockholm University. Almqvist & Wiksell, Stockholm, G. Janzon (Ed.) Gotlands Mellanneolitiska Gravar
    • Gejvall N.-G. Description of the human skeleton from the graves and some associated animal bones. Studies in North-european Archaeology 1974, vol. 6:141-175. Stockholm University. Almqvist & Wiksell, Stockholm. G. Janzon (Ed.).
    • (1974) Studies in North-european Archaeology , vol.6 , pp. 141-175
    • Gejvall, N.-G.1
  • 16
    • 0001873964 scopus 로고    scopus 로고
    • Osteology, DNA and sex identification: morphological and molecular sex identifications of five neolithic individuals from Ajvide, Gotland
    • Götherström A., Liden K., Ahlstrom T., Kallersjo M., Brown T.A. Osteology, DNA and sex identification: morphological and molecular sex identifications of five neolithic individuals from Ajvide, Gotland. International Journal of Osteoarchaeology 1997, 7:71-81.
    • (1997) International Journal of Osteoarchaeology , vol.7 , pp. 71-81
    • Götherström, A.1    Liden, K.2    Ahlstrom, T.3    Kallersjo, M.4    Brown, T.A.5
  • 20
    • 0025910760 scopus 로고
    • Y-Chromosome-Specific DNA amplified in ancient human bone
    • Hummel S., Herrmann B. Y-Chromosome-Specific DNA amplified in ancient human bone. Naturwissenschaften 1991, 78:266-267.
    • (1991) Naturwissenschaften , vol.78 , pp. 266-267
    • Hummel, S.1    Herrmann, B.2
  • 21
    • 0025368154 scopus 로고
    • Sex determination in the subadult ilia e an indirect test of weavers nonmetric sexing method
    • Hunt D.R. Sex determination in the subadult ilia e an indirect test of weavers nonmetric sexing method. Journal of Forensic Sciences 1990, 35:881-885.
    • (1990) Journal of Forensic Sciences , vol.35 , pp. 881-885
    • Hunt, D.R.1
  • 22
    • 0346469636 scopus 로고
    • Gotlands Mellanneolitiska Gravar
    • Stockholm University. Almqvist & Wiksell, Stockholm
    • Janzon G. Gotlands Mellanneolitiska Gravar. Studies in North-european Archaeology 1974, vol. 6. Stockholm University. Almqvist & Wiksell, Stockholm.
    • (1974) Studies in North-european Archaeology , vol.6
    • Janzon, G.1
  • 25
    • 14844346186 scopus 로고    scopus 로고
    • Evaluations of sex assessment using weighted traits on incomplete skeletal remains
    • Kjellström A. Evaluations of sex assessment using weighted traits on incomplete skeletal remains. International Journal of Osteoarchaeology 2004, 14(5):360-373.
    • (2004) International Journal of Osteoarchaeology , vol.14 , Issue.5 , pp. 360-373
    • Kjellström, A.1
  • 27
    • 0034155079 scopus 로고    scopus 로고
    • Molecular sex identification of stillborn and neonate individuals ("Traufkinder") from the burial site Aegerten
    • Lassen C., Hummel S., Herrmann B. Molecular sex identification of stillborn and neonate individuals ("Traufkinder") from the burial site Aegerten. Anthropologischer Anzeiger 2000, 58:1-8.
    • (2000) Anthropologischer Anzeiger , vol.58 , pp. 1-8
    • Lassen, C.1    Hummel, S.2    Herrmann, B.3
  • 28
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H., Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 2009, 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 29
    • 84877601474 scopus 로고    scopus 로고
    • Non-invasive prenatal testing of fetal whole chromosome aneuploidy by massively parallel sequencing
    • Liang D., Lv W., Wang H., Xu L., Liu J., Li H., Hu L., Peng Y., Wu L. Non-invasive prenatal testing of fetal whole chromosome aneuploidy by massively parallel sequencing. Prenatal Diagnosis 2013, 10.1002/pd.4033.
    • (2013) Prenatal Diagnosis
    • Liang, D.1    Lv, W.2    Wang, H.3    Xu, L.4    Liu, J.5    Li, H.6    Hu, L.7    Peng, Y.8    Wu, L.9
  • 30
    • 0034998823 scopus 로고    scopus 로고
    • Sexually dimorphic mandibular morphology in the first few years of life
    • Loth S.R., Henneberg M. Sexually dimorphic mandibular morphology in the first few years of life. American Journal of Physical Anthropology 2001, 115:179-186.
    • (2001) American Journal of Physical Anthropology , vol.115 , pp. 179-186
    • Loth, S.R.1    Henneberg, M.2
  • 33
    • 0001313633 scopus 로고    scopus 로고
    • Some sexually dimorphic features of the human juvenile skull and their value in sex determination in immature skeletal remains
    • Molleson T., Cruse K., Mays S. Some sexually dimorphic features of the human juvenile skull and their value in sex determination in immature skeletal remains. Journal of Archaeological Science 1998, 25:719-728.
    • (1998) Journal of Archaeological Science , vol.25 , pp. 719-728
    • Molleson, T.1    Cruse, K.2    Mays, S.3
  • 35
    • 53549096800 scopus 로고    scopus 로고
    • Sequence length Polymorphisms within primate amelogenin and amelogenin-like genes: usefulness in sex determination
    • Morrill B.H., Rickords L.F., Schafstall H.J. Sequence length Polymorphisms within primate amelogenin and amelogenin-like genes: usefulness in sex determination. American Journal of Primatology 2008, 70:976-985.
    • (2008) American Journal of Primatology , vol.70 , pp. 976-985
    • Morrill, B.H.1    Rickords, L.F.2    Schafstall, H.J.3
  • 36
    • 0013264299 scopus 로고    scopus 로고
    • Anew approach to sexual diagnosis in past populations. Practical adjustments from Van Vark's procedure
    • Murail P., Bruzek J., Braga J. Anew approach to sexual diagnosis in past populations. Practical adjustments from Van Vark's procedure. International Journal of Osteoarchaeology 1999, 9(1):39-53.
    • (1999) International Journal of Osteoarchaeology , vol.9 , Issue.1 , pp. 39-53
    • Murail, P.1    Bruzek, J.2    Braga, J.3
  • 38
    • 31144442151 scopus 로고    scopus 로고
    • Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA
    • Poinar H.N., Schwarz C., Qi J., Shapiro B., MacPhee R.D., Buigues B., et al. Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA. Science 2006, 311(5759):392-394.
    • (2006) Science , vol.311 , Issue.5759 , pp. 392-394
    • Poinar, H.N.1    Schwarz, C.2    Qi, J.3    Shapiro, B.4    MacPhee, R.D.5    Buigues, B.6
  • 39
    • 84881557632 scopus 로고    scopus 로고
    • Difficulties of sex determination from forensic bone degraded DNA: a comparison of three methods
    • Quincey D., Cale G., Alunni V., Quatrehomme G. Difficulties of sex determination from forensic bone degraded DNA: a comparison of three methods. Journal of Forensic Science Society 2013, 10.1016/j.scijus.2013.04.003.
    • (2013) Journal of Forensic Science Society
    • Quincey, D.1    Cale, G.2    Alunni, V.3    Quatrehomme, G.4
  • 41
    • 80053581951 scopus 로고    scopus 로고
    • An Aboriginal Australian genome reveals separate human dispersals into Asia
    • Rasmussen M., Guo X., Wang Y., Lohmueller K.E., Rasmussen S., Albrechtsen A., et al. An Aboriginal Australian genome reveals separate human dispersals into Asia. Science 2011, 334(6052):94-98.
    • (2011) Science , vol.334 , Issue.6052 , pp. 94-98
    • Rasmussen, M.1    Guo, X.2    Wang, Y.3    Lohmueller, K.E.4    Rasmussen, S.5    Albrechtsen, A.6
  • 43
    • 0004959068 scopus 로고
    • Sexing immature human skeletons
    • Rosing F.W. Sexing immature human skeletons. Journal of Human Evolution 1983, 12:149-155.
    • (1983) Journal of Human Evolution , vol.12 , pp. 149-155
    • Rosing, F.W.1
  • 44
    • 84859112401 scopus 로고    scopus 로고
    • Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA
    • Sawyer S., Krause J., Guschanski K., Savolainen V., Pääbo S. Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA. PLoS One 2012, 7:e34131.
    • (2012) PLoS One , vol.7
    • Sawyer, S.1    Krause, J.2    Guschanski, K.3    Savolainen, V.4    Pääbo, S.5
  • 46
    • 0036780847 scopus 로고    scopus 로고
    • Brief communication: a blind test of mandibular morphology for sexing mandibles in the first few years of life
    • Scheuer L. Brief communication: a blind test of mandibular morphology for sexing mandibles in the first few years of life. American Journal of Physical Anthropology 2002, 119:189-191.
    • (2002) American Journal of Physical Anthropology , vol.119 , pp. 189-191
    • Scheuer, L.1
  • 47
    • 0027392736 scopus 로고
    • Sex determination of infant and juvenile skeletons .1. Morphognostic Features
    • Schutkowski H. Sex determination of infant and juvenile skeletons .1. Morphognostic Features. American Journal of Physical Anthropology 1993, 90:199-205.
    • (1993) American Journal of Physical Anthropology , vol.90 , pp. 199-205
    • Schutkowski, H.1
  • 50
    • 0000108127 scopus 로고
    • Arapid and quantitative DNA sex test e fluorescence-based Pcr analysis of X-Y homologous gene amelogenin
    • Sullivan K.M., Mannucci A., Kimpton C.P., Gill P. Arapid and quantitative DNA sex test e fluorescence-based Pcr analysis of X-Y homologous gene amelogenin. Biotechniques 1993, 15:636.
    • (1993) Biotechniques , vol.15 , pp. 636
    • Sullivan, K.M.1    Mannucci, A.2    Kimpton, C.P.3    Gill, P.4
  • 51
    • 0042320315 scopus 로고    scopus 로고
    • Nonmetric subadult skeletal sexing traits: I. A blind test of the accuracy of eight previously proposed methods using prehistoric known-sex mummies from Northern Chile
    • Sutter R.C. Nonmetric subadult skeletal sexing traits: I. A blind test of the accuracy of eight previously proposed methods using prehistoric known-sex mummies from Northern Chile. Journal of Forensic Sciences 2003, 48:927-935.
    • (2003) Journal of Forensic Sciences , vol.48 , pp. 927-935
    • Sutter, R.C.1
  • 55
    • 0019190920 scopus 로고
    • Sex differences in the ilia of a known sex and age sample of fetal and infant skeletons
    • Weaver D.S. Sex differences in the ilia of a known sex and age sample of fetal and infant skeletons. American Journal of Physical Anthropology 1980, 52:191-195.
    • (1980) American Journal of Physical Anthropology , vol.52 , pp. 191-195
    • Weaver, D.S.1
  • 56
    • 41149113037 scopus 로고    scopus 로고
    • Morphometric criteria for sexing juvenile human skeletons using the ilium
    • Wilson L.A., MacLeod N., Humphrey L.T. Morphometric criteria for sexing juvenile human skeletons using the ilium. Journal of Forensic Sciences 2008, 53:269-278.
    • (2008) Journal of Forensic Sciences , vol.53 , pp. 269-278
    • Wilson, L.A.1    MacLeod, N.2    Humphrey, L.T.3
  • 57
    • 79952452028 scopus 로고    scopus 로고
    • On the reliability of a geometric morphometric approach to sex determination: a blind test of six criteria of the juvenile ilium
    • Wilson L.A., Cardoso H.F.V., Humphrey L.T. On the reliability of a geometric morphometric approach to sex determination: a blind test of six criteria of the juvenile ilium. Forensic Science International 2010, 10.1016/j.forsciint.2010.06.014.
    • (2010) Forensic Science International
    • Wilson, L.A.1    Cardoso, H.F.V.2    Humphrey, L.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.