FAssem : FPGA based acceleration of de novo genome assembly

Proceedings - 21st Annual International IEEE Symposium on Field-Programmable Custom Computing Machines, FCCM 2013

Volumn , Issue , 2013, Pages 173-176

  Varma, B Sharat Chandra ^a   Paul, Kolin ^a   Balakrishnan, M ^a   Lavenier, Dominique ^b  

^a INDIAN INSTITUTE OF TECHNOLOGY DELHI   (India)

^b CAMPUS DE BEAULIEU   (France)

Author keywords

Acceleration; Bioinformatics; FPGA; Next generation sequencing assembly

Indexed keywords

ASSEMBLY PROCESS; DE NOVO ASSEMBLIES; FPGA-BASED ACCELERATIONS; GENOME ASSEMBLY; LARGE AMOUNTS OF DATA; NEXT-GENERATION SEQUENCING; SEQUENCING ERRORS; SOFTWARE PROGRAM;

ACCELERATION; BIOINFORMATICS; COMPUTERS; SILK;

FIELD PROGRAMMABLE GATE ARRAYS (FPGA);

EID: 84881176756     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/FCCM.2013.25     Document Type: Conference Paper

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