Exploring the connectome: Petascale volume visualization of microscopy data streams

IEEE Computer Graphics and Applications

Volumn 33, Issue 4, 2013, Pages 50-61

  Beyer, Johanna ^a   Hadwiger, Markus ^a   Al Awami, Ali ^a   Jeong, Won Ki ^b   Kasthuri, Narayanan ^c   Lichtman, Jeff W ^c   Pfister, Hanspeter ^c  

^a KING ABDULLAH UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Saudi Arabia)

^b Ulsan National Institute of Science and Technology   (South Korea)

^c HARVARD UNIVERSITY   (United States)

Author keywords

computer graphics; high resolution microscopy; high throughput imaging; neuroscience; petascale volume exploration; segmented volume data

Indexed keywords

HIGH-RESOLUTION MICROSCOPY; HIGH-THROUGHPUT IMAGING; INTERACTIVE EXPLORATION; INTERACTIVE RATES; NEURAL STRUCTURES; NEUROSCIENCE; VOLUME DATA; VOLUME VISUALIZATION;

COMPUTER GRAPHICS; DATA COMMUNICATION SYSTEMS; DATA HANDLING; DIGITAL STORAGE; MEMORY ARCHITECTURE; VISUALIZATION;

DATA VISUALIZATION;

ANIMAL; BRAIN; BRAIN CHEMISTRY; COMPUTER GRAPHICS; CONNECTOME; CYTOLOGY; DATABASE MANAGEMENT SYSTEM; ELECTRON MICROSCOPY; IMAGE PROCESSING; MOUSE; PHYSIOLOGY; PROCEDURES; RAT; THREE DIMENSIONAL IMAGING;

ANIMALS; BRAIN; BRAIN CHEMISTRY; COMPUTER GRAPHICS; CONNECTOME; DATABASE MANAGEMENT SYSTEMS; IMAGE PROCESSING, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MICE; MICROSCOPY, ELECTRON; RATS;

EID: 84880794787     PISSN: 02721716     EISSN: None     Source Type: Journal    
DOI: 10.1109/MCG.2013.55     Document Type: Article

References (5)

1. S. Seung, Connectome: How the Brain's Wiring Makes Us Who We Are, Houghton Mifflin Harcourt, 2012.
2. D. Bock et al., "Network Anatomy and In Vivo Physiology of Visual Cortical Neurons," Nature, vol. 471, no. 7337, 2011, pp. 177-182.
3. W.-K. Jeong et al., "Scalable and Interactive Segmentation and Visualization of Neural Processes in EM Datasets," IEEE Trans. Visualization and Computer Graphics, vol. 15, no. 6, 2009, pp. 1505-1514.
4. M. Hadwiger et al., "Interactive Volume Exploration of Petascale Microscopy Data Streams Using a Visualization-Driven Virtual Memory Approach," IEEE Trans. Visualization and Computer Graphics, vol. 18, no. 12, 2012, pp. 2285-2294.
5. K. Engel, "CERA-TVR: A Framework for Interactive High-Quality Teravoxel Volume Visualization on Standard PCs," Proc. 2011 IEEE Symp. Large-Data Analysis and Visualization (LDAV 11), IEEE, 2011, pp. 123-124.