-
1
-
-
77953233453
-
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
-
Atwell S., Huang Y.S., Vilhjálmsson B.J., Willems G., Horton M., Li Y., Meng D., Platt A., Tarone A.M., Hu T.T., Jiang R., Muliyati N.W., Zhang X., Amer M.A., Baxter I., Brachi B., Chory J., Dean C., Debieu M., de Meaux J., Ecker J.R., Faure N., Kniskern J.M., Jones J.D.G., Michael T., Nemri A., Roux F., Salt D.E., Tang C., Todesco M., Traw M.B., Weigel D., Marjoram P., Borevitz J.O., Bergelson J., Nordborg M. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature 2010, 465:627-631.
-
(2010)
Nature
, vol.465
, pp. 627-631
-
-
Atwell, S.1
Huang, Y.S.2
Vilhjálmsson, B.J.3
Willems, G.4
Horton, M.5
Li, Y.6
Meng, D.7
Platt, A.8
Tarone, A.M.9
Hu, T.T.10
Jiang, R.11
Muliyati, N.W.12
Zhang, X.13
Amer, M.A.14
Baxter, I.15
Brachi, B.16
Chory, J.17
Dean, C.18
Debieu, M.19
de Meaux, J.20
Ecker, J.R.21
Faure, N.22
Kniskern, J.M.23
Jones, J.D.G.24
Michael, T.25
Nemri, A.26
Roux, F.27
Salt, D.E.28
Tang, C.29
Todesco, M.30
Traw, M.B.31
Weigel, D.32
Marjoram, P.33
Borevitz, J.O.34
Bergelson, J.35
Nordborg, M.36
more..
-
2
-
-
84855798536
-
Estimation of linkage disequilibrium in four US pig breeds
-
Badke Y.M., Bates R.O., Ernst C.W., Schwab C., Steibel J.P. Estimation of linkage disequilibrium in four US pig breeds. BMC Genomics 2012, 13:24.
-
(2012)
BMC Genomics
, vol.13
, pp. 24
-
-
Badke, Y.M.1
Bates, R.O.2
Ernst, C.W.3
Schwab, C.4
Steibel, J.P.5
-
3
-
-
35348817330
-
Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering
-
Browning S.R., Browning B.L. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. The American Journal of Human Genetics 2007, 81:1084-1097.
-
(2007)
The American Journal of Human Genetics
, vol.81
, pp. 1084-1097
-
-
Browning, S.R.1
Browning, B.L.2
-
5
-
-
57649136554
-
Progress and challenges in genome-wide association studies in humans
-
Donnelly P. Progress and challenges in genome-wide association studies in humans. Nature 2008, 456:728-731.
-
(2008)
Nature
, vol.456
, pp. 728-731
-
-
Donnelly, P.1
-
6
-
-
78649372542
-
Imputation of genotypes from different single nucleotide polymorphism panels in dairy cattle
-
Druet T., Schrooten C., de Roos A.P.W. Imputation of genotypes from different single nucleotide polymorphism panels in dairy cattle. Journal of Dairy Science 2010, 93:5443-5454.
-
(2010)
Journal of Dairy Science
, vol.93
, pp. 5443-5454
-
-
Druet, T.1
Schrooten, C.2
de Roos, A.P.W.3
-
7
-
-
63249104734
-
Use of weighted reference panels based on empirical estimates of ancestry for capturing untyped variation
-
Egyud M.R.L., Gajdos Z.K.Z., Butler J.L., Tischfield S., Le Marchand L., Kolonel L.N., Haiman C.A., Henderson B.E., Hirschhorn J.N. Use of weighted reference panels based on empirical estimates of ancestry for capturing untyped variation. Human Genetics 2009, 125:295-303.
-
(2009)
Human Genetics
, vol.125
, pp. 295-303
-
-
Egyud, M.R.L.1
Gajdos, Z.K.Z.2
Butler, J.L.3
Tischfield, S.4
Le Marchand, L.5
Kolonel, L.N.6
Haiman, C.A.7
Henderson, B.E.8
Hirschhorn, J.N.9
-
8
-
-
77956197018
-
Utilizing genotype imputation for the augmentation of sequence data
-
Fridley B.L., Jenkins G., Deyo-Svendsen M.E., Hebbring S., Freimuth R. Utilizing genotype imputation for the augmentation of sequence data. PLoS One 2010, 5:e11018.
-
(2010)
PLoS One
, vol.5
-
-
Fridley, B.L.1
Jenkins, G.2
Deyo-Svendsen, M.E.3
Hebbring, S.4
Freimuth, R.5
-
9
-
-
58149175796
-
Practical issues in imputation-based association mapping
-
Guan Y., Stephens M. Practical issues in imputation-based association mapping. PLoS Genetics 2008, 4:e1000279.
-
(2008)
PLoS Genetics
, vol.4
-
-
Guan, Y.1
Stephens, M.2
-
10
-
-
65949104586
-
Genomewide association studies and human disease
-
Hardy J., Singleton A. Genomewide association studies and human disease. New England Journal of Medicine 2009, 360:1759-1768.
-
(2009)
New England Journal of Medicine
, vol.360
, pp. 1759-1768
-
-
Hardy, J.1
Singleton, A.2
-
11
-
-
84856920619
-
Factors affecting the accuracy of genotype imputation in populations from several maize breeding programs
-
Hickey J.M., Crossa J., Rabu R., de los Campos G. Factors affecting the accuracy of genotype imputation in populations from several maize breeding programs. Crop Science 2012, 52:654-663.
-
(2012)
Crop Science
, vol.52
, pp. 654-663
-
-
Hickey, J.M.1
Crossa, J.2
Rabu, R.3
De Los Campos, G.4
-
12
-
-
84880724424
-
-
A catalog of published genome-wide association studies. (accessed: September 6
-
Hindorff, L.A., MacArthur, J., Wise, A., Junkins, H.A., Hall, P.N., Klemm, A.K., Manolio, T.A., A catalog of published genome-wide association studies. (accessed: September 6, 2011). http://www.genome.gov/gwastudies/.
-
(2011)
-
-
Hindorff, L.A.1
MacArthur, J.2
Wise, A.3
Junkins, H.A.4
Hall, P.N.5
Klemm, A.K.6
Manolio, T.A.7
-
13
-
-
67249117049
-
Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
-
Hindorff L.A., Sethupathy P., Junkins H.A., Ramos E.M., Mehta J.P., Collins F.S., Manolio T.A. Potential etiologic and functional implications of genome-wide association loci for human diseases and traits. Proceedings of the National Academy of Sciences of the United States of America 2009, 106:9362-9367.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 9362-9367
-
-
Hindorff, L.A.1
Sethupathy, P.2
Junkins, H.A.3
Ramos, E.M.4
Mehta, J.P.5
Collins, F.S.6
Manolio, T.A.7
-
14
-
-
82355161536
-
Haplotype variation and genotype imputation in African populations
-
Huang L., Jakobsson M., Pemberton T.J., Ibrahim M., Nyambo T., Omar S., Pritchard J.K., Tishkoff S.A., Rosenberg N.A. Haplotype variation and genotype imputation in African populations. Genetic Epidemiology 2011, 35:766-780.
-
(2011)
Genetic Epidemiology
, vol.35
, pp. 766-780
-
-
Huang, L.1
Jakobsson, M.2
Pemberton, T.J.3
Ibrahim, M.4
Nyambo, T.5
Omar, S.6
Pritchard, J.K.7
Tishkoff, S.A.8
Rosenberg, N.A.9
-
15
-
-
62649089065
-
Genotype-imputation accuracy across worldwide human populations
-
Huang L., Li Y., Singleton A.B., Hardy J.A., Abecasis G., Rosenberg N.A., Scheet P. Genotype-imputation accuracy across worldwide human populations. The American Journal of Human Genetics 2009, 84:235-250.
-
(2009)
The American Journal of Human Genetics
, vol.84
, pp. 235-250
-
-
Huang, L.1
Li, Y.2
Singleton, A.B.3
Hardy, J.A.4
Abecasis, G.5
Rosenberg, N.A.6
Scheet, P.7
-
16
-
-
84865062784
-
A coalescent model for genotype imputation
-
Jewett E., Zawistowski M., Rosenberg N.A., Zöllner S. A coalescent model for genotype imputation. Genetics 2012, 191:1239-1255.
-
(2012)
Genetics
, vol.191
, pp. 1239-1255
-
-
Jewett, E.1
Zawistowski, M.2
Rosenberg, N.A.3
Zöllner, S.4
-
20
-
-
78349254248
-
Fine mapping in 94 inbred mouse strains using a high-density haplotype resource
-
Kirby A., Kang H.M., Wade C.M., Cotsapas C., Kostem E., Han B., Furlotte N., Kang E.Y., Rivas M., Bogue M.A., Frazer K.A., Johnson F.M., Beilharz E.J., Cox D.R., Eskin E., Daly M.J. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics 2010, 185:1081-1095.
-
(2010)
Genetics
, vol.185
, pp. 1081-1095
-
-
Kirby, A.1
Kang, H.M.2
Wade, C.M.3
Cotsapas, C.4
Kostem, E.5
Han, B.6
Furlotte, N.7
Kang, E.Y.8
Rivas, M.9
Bogue, M.A.10
Frazer, K.A.11
Johnson, F.M.12
Beilharz, E.J.13
Cox, D.R.14
Eskin, E.15
Daly, M.J.16
-
22
-
-
79957951017
-
Low-coverage sequencing: implications for design of complex trait association studies
-
Li Y., Sidore C., Kang H.M., Boehnke M., Abecasis G.R. Low-coverage sequencing: implications for design of complex trait association studies. Genome Research 2011, 21:940-951.
-
(2011)
Genome Research
, vol.21
, pp. 940-951
-
-
Li, Y.1
Sidore, C.2
Kang, H.M.3
Boehnke, M.4
Abecasis, G.R.5
-
23
-
-
70350231628
-
Genotype imputation
-
Li Y., Willer C.J., Sanna S., Abecasis G.R. Genotype imputation. Annual Review of Genomics and Human Genetics 2009, 10:387-406.
-
(2009)
Annual Review of Genomics and Human Genetics
, vol.10
, pp. 387-406
-
-
Li, Y.1
Willer, C.J.2
Sanna, S.3
Abecasis, G.R.4
-
24
-
-
77954407332
-
Genomewide association studies and assessment of the risk of disease
-
Manolio T.A. Genomewide association studies and assessment of the risk of disease. New England Journal of Medicine 2010, 363:166-176.
-
(2010)
New England Journal of Medicine
, vol.363
, pp. 166-176
-
-
Manolio, T.A.1
-
26
-
-
77953808087
-
Genotype imputation for genome-wide association studies
-
Marchini J., Howie B. Genotype imputation for genome-wide association studies. Nature Reviews Genetics 2010, 11:499-511.
-
(2010)
Nature Reviews Genetics
, vol.11
, pp. 499-511
-
-
Marchini, J.1
Howie, B.2
-
27
-
-
34347344976
-
A new multipoint method for genome-wide association studies by imputation of genotypes
-
Marchini J., Howie B., Myers S., McVean G., Donnelly P. A new multipoint method for genome-wide association studies by imputation of genotypes. Nature Genetics 2007, 39:906-913.
-
(2007)
Nature Genetics
, vol.39
, pp. 906-913
-
-
Marchini, J.1
Howie, B.2
Myers, S.3
McVean, G.4
Donnelly, P.5
-
28
-
-
33845198883
-
Testing untyped alleles (TUNA)-applications to genome-wide association studies
-
Nicolae D.L. Testing untyped alleles (TUNA)-applications to genome-wide association studies. Genetic Epidemiology 2006, 30:718-727.
-
(2006)
Genetic Epidemiology
, vol.30
, pp. 718-727
-
-
Nicolae, D.L.1
-
29
-
-
78649520560
-
A generic coalescent-based framework for the selection of a reference panel for imputation
-
Paşaniuc B., Avinery R., Gur T., Skibola C.F., Bracci P.M., Halperin E. A generic coalescent-based framework for the selection of a reference panel for imputation. Genetic Epidemiology 2010, 34:773-782.
-
(2010)
Genetic Epidemiology
, vol.34
, pp. 773-782
-
-
Paşaniuc, B.1
Avinery, R.2
Gur, T.3
Skibola, C.F.4
Bracci, P.M.5
Halperin, E.6
-
30
-
-
56149105085
-
Analyses and comparison of accuracy of different genotype imputation methods
-
Pei Y.-F., Li J., Zhang L., Papasian C.J., Deng H.-W. Analyses and comparison of accuracy of different genotype imputation methods. PLoS One 2008, 3:e3551.
-
(2008)
PLoS One
, vol.3
-
-
Pei, Y.-F.1
Li, J.2
Zhang, L.3
Papasian, C.J.4
Deng, H.-W.5
-
31
-
-
34547622688
-
Imputation-based analysis of association studies: candidate regions and quantitative traits
-
Servin B., Stephens M. Imputation-based analysis of association studies: candidate regions and quantitative traits. PLoS Genetics 2007, 3:e114.
-
(2007)
PLoS Genetics
, vol.3
-
-
Servin, B.1
Stephens, M.2
-
32
-
-
77949837410
-
Practical considerations for imputation of untyped markers in admixed populations
-
Shriner D., Adeyemo A., Chen G., Rotimi C.N. Practical considerations for imputation of untyped markers in admixed populations. Genetic Epidemiology 2010, 34:258-265.
-
(2010)
Genetic Epidemiology
, vol.34
, pp. 258-265
-
-
Shriner, D.1
Adeyemo, A.2
Chen, G.3
Rotimi, C.N.4
-
33
-
-
79951521421
-
Progress and promise of genome-wide association studies for human complex trait genetics
-
Stranger B.E., Stahl E.A., Raj T. Progress and promise of genome-wide association studies for human complex trait genetics. Genetics 2011, 187:367-383.
-
(2011)
Genetics
, vol.187
, pp. 367-383
-
-
Stranger, B.E.1
Stahl, E.A.2
Raj, T.3
-
34
-
-
78649282892
-
Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging
-
Surakka I., Kristiansson K., Anttila V., Inouye M., Barnes C., Moutsianas L., Salomaa V., Daly M., Palotie A., Peltonen L., Ripatti S. Founder population-specific HapMap panel increases power in GWA studies through improved imputation accuracy and CNV tagging. Genome Research 2010, 20:1344-1351.
-
(2010)
Genome Research
, vol.20
, pp. 1344-1351
-
-
Surakka, I.1
Kristiansson, K.2
Anttila, V.3
Inouye, M.4
Barnes, C.5
Moutsianas, L.6
Salomaa, V.7
Daly, M.8
Palotie, A.9
Peltonen, L.10
Ripatti, S.11
-
35
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson G.A. On the number of segregating sites in genetical models without recombination. Theoretical Population Biology 1975, 7:256-276.
-
(1975)
Theoretical Population Biology
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
|