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Volumn 21, Issue 2, 2013, Pages 165-174

Directional genomic hybridization for chromosomal inversion discovery and detection

Author keywords

chromatid painting; chromosomal inversions; Strand specific hybridization

Indexed keywords

ANIMAL CELL; ARTICLE; BIOINFORMATICS; CHROMATID; CHROMOSOME INVERSION; COMPARATIVE STUDY; CONTROLLED STUDY; EVOLUTION; GENE PROBE; GENETIC VARIABILITY; GENOMICS; HUMAN; HUMAN CELL; HUMAN GENOME; HYBRIDIZATION; METAPHASE CHROMOSOME; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

EID: 84880572522     PISSN: 09673849     EISSN: 15736849     Source Type: Journal    
DOI: 10.1007/s10577-013-9345-0     Document Type: Article
Times cited : (31)

References (38)
  • 1
  • 2
    • 0029920583 scopus 로고    scopus 로고
    • Establishment of a myeloid leukaemia cell line (Kasumi-4) with t(9;22;11)(q34;q11;q13), inv(3)(q21q26) and the EVI1 gene activation from a patient with chronic myelogenous leukaemia in blast crisis
    • 8611478 10.1046/j.1365-2141.1996.4821023.x 1:STN:280:DyaK283gtVCgtg%3D%3D
    • Asou H, Eguchi M, Suzukawa K, Morishita K, Tanaka K, Date M, Hamamoto K, Kamada N (1996) Establishment of a myeloid leukaemia cell line (Kasumi-4) with t(9;22;11)(q34;q11;q13), inv(3)(q21q26) and the EVI1 gene activation from a patient with chronic myelogenous leukaemia in blast crisis. Br J Haematol 93(1):68-74
    • (1996) Br J Haematol , vol.93 , Issue.1 , pp. 68-74
    • Asou, H.1    Eguchi, M.2    Suzukawa, K.3    Morishita, K.4    Tanaka, K.5    Date, M.6    Hamamoto, K.7    Kamada, N.8
  • 3
    • 3142699748 scopus 로고    scopus 로고
    • Frequent recombination in telomeric DNA may extend the proliferative life of telomerase-negative cells
    • 15258249 10.1093/nar/gkh691 1:CAS:528:DC%2BD2cXlsl2rtbs%3D
    • Bailey SM, Brenneman MA, Goodwin EH (2004a) Frequent recombination in telomeric DNA may extend the proliferative life of telomerase-negative cells. Nucleic Acids Res 32(12):3743-3751
    • (2004) Nucleic Acids Res , vol.32 , Issue.12 , pp. 3743-3751
    • Bailey, S.M.1    Brenneman, M.A.2    Goodwin, E.H.3
  • 4
    • 0035964864 scopus 로고    scopus 로고
    • Strand-specific postreplicative processing of mammalian telomeres
    • 11577237 10.1126/science.1062560 1:CAS:528:DC%2BD3MXntlKjtr8%3D
    • Bailey SM, Cornforth MN, Kurimasa A, Chen DJ, Goodwin EH (2001) Strand-specific postreplicative processing of mammalian telomeres. Science 293(5539):2462-2465
    • (2001) Science , vol.293 , Issue.5539 , pp. 2462-2465
    • Bailey, S.M.1    Cornforth, M.N.2    Kurimasa, A.3    Chen, D.J.4    Goodwin, E.H.5
  • 5
    • 1542358849 scopus 로고    scopus 로고
    • Dysfunctional mammalian telomeres join with DNA double-strand breaks
    • 10.1016/j.dnarep.2003.11.007 1:CAS:528:DC%2BD2cXhvVOrtLg%3D
    • Bailey SM, Cornforth MN, Ullrich RL, Goodwin EH (2004b) Dysfunctional mammalian telomeres join with DNA double-strand breaks. DNA Repair (Amst) 3(4):349-357
    • (2004) DNA Repair (Amst) , vol.3 , Issue.4 , pp. 349-357
    • Bailey, S.M.1    Cornforth, M.N.2    Ullrich, R.L.3    Goodwin, E.H.4
  • 6
    • 4344605708 scopus 로고    scopus 로고
    • Strand-specific fluorescence in situ hybridization: The CO-FISH family
    • 15305050 10.1159/000079565 1:CAS:528:DC%2BD2cXotVCmtrw%3D
    • Bailey SM, Goodwin EH, Cornforth MN (2004c) Strand-specific fluorescence in situ hybridization: the CO-FISH family. Cytogenet Genome Res 107(1-2):14-17
    • (2004) Cytogenet Genome Res , vol.107 , Issue.1-2 , pp. 14-17
    • Bailey, S.M.1    Goodwin, E.H.2    Cornforth, M.N.3
  • 7
    • 79952110526 scopus 로고    scopus 로고
    • Chromosome orientation fluorescence in situ hybridization or strand-specific FISH
    • 20809311 10.1007/978-1-60761-789-1-12 1:CAS:528:DC%2BC3cXht12msLfF
    • Bailey SM, Williams ES, Cornforth MN, Goodwin EH (2010) Chromosome orientation fluorescence in situ hybridization or strand-specific FISH. Methods Mol Biol 659:173-183
    • (2010) Methods Mol Biol , vol.659 , pp. 173-183
    • Bailey, S.M.1    Williams, E.S.2    Cornforth, M.N.3    Goodwin, E.H.4
  • 8
    • 84856435916 scopus 로고    scopus 로고
    • Structural variation: The genome's hidden architecture
    • 22290183 10.1038/nmeth.1858 1:CAS:528:DC%2BC38XhsVOqsbw%3D
    • Baker M (2012) Structural variation: the genome's hidden architecture. Nat Methods 9(2):133-137
    • (2012) Nat Methods , vol.9 , Issue.2 , pp. 133-137
    • Baker, M.1
  • 10
    • 82955163171 scopus 로고    scopus 로고
    • Fluorescence in situ hybridization with high-complexity repeat-free oligonucleotide probes generated by massively parallel synthesis
    • 22006037 10.1007/s10577-011-9245-0 1:CAS:528:DC%2BC3MXhsVaqurfO
    • Boyle S, Rodesch MJ, Halvensleben HA, Jeddeloh JA, Bickmore WA (2011) Fluorescence in situ hybridization with high-complexity repeat-free oligonucleotide probes generated by massively parallel synthesis. Chromosome Res 19(7):901-909
    • (2011) Chromosome Res , vol.19 , Issue.7 , pp. 901-909
    • Boyle, S.1    Rodesch, M.J.2    Halvensleben, H.A.3    Jeddeloh, J.A.4    Bickmore, W.A.5
  • 11
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • Cancer Genome Atlas N 10.1038/nature11252
    • Cancer Genome Atlas N (2012) Comprehensive molecular characterization of human colon and rectal cancer. Nature 487(7407):330-337
    • (2012) Nature , vol.487 , Issue.7407 , pp. 330-337
  • 12
    • 17844394699 scopus 로고    scopus 로고
    • Dose-dependent generation of RET/PTC in human thyroid cells after in vitro exposure to gamma-radiation: A model of carcinogenic chromosomal rearrangement induced by ionizing radiation
    • 15671095 10.1210/jc.2004-1811 1:CAS:528:DC%2BD2MXjsFWisrk%3D
    • Caudill CM, Zhu Z, Ciampi R, Stringer JR, Nikiforov YE (2005) Dose-dependent generation of RET/PTC in human thyroid cells after in vitro exposure to gamma-radiation: a model of carcinogenic chromosomal rearrangement induced by ionizing radiation. J Clin Endocrinol Metab 90(4):2364-2369
    • (2005) J Clin Endocrinol Metab , vol.90 , Issue.4 , pp. 2364-2369
    • Caudill, C.M.1    Zhu, Z.2    Ciampi, R.3    Stringer, J.R.4    Nikiforov, Y.E.5
  • 13
    • 77956849313 scopus 로고    scopus 로고
    • Genomic rearrangements in inherited disease and cancer
    • 20541013 10.1016/j.semcancer.2010.05.007 1:CAS:528:DC%2BC3cXhtFOntbrL
    • Chen JM, Cooper DN, Ferec C, Kehrer-Sawatzki H, Patrinos GP (2010) Genomic rearrangements in inherited disease and cancer. Semin Cancer Biol 20(4):222-233
    • (2010) Semin Cancer Biol , vol.20 , Issue.4 , pp. 222-233
    • Chen, J.M.1    Cooper, D.N.2    Ferec, C.3    Kehrer-Sawatzki, H.4    Patrinos, G.P.5
  • 14
    • 0001727183 scopus 로고    scopus 로고
    • Radiation-induced damage and the formation of chromosomal aberrations
    • J.A. Nickoloff M.F. Hoekstra (eds) Humana Press Inc Totowa 10.1385/0-89603-500-X:559
    • Cornforth M (1998) Radiation-induced damage and the formation of chromosomal aberrations. In: Nickoloff JA, Hoekstra MF (eds) DNA damage and repair. Humana Press Inc, Totowa, pp 559-585
    • (1998) DNA Damage and Repair , pp. 559-585
    • Cornforth, M.1
  • 15
    • 0035160043 scopus 로고    scopus 로고
    • Termini of human chromosomes display elevated rates of mitotic recombination
    • 11139603 10.1093/mutage/16.1.85 1:CAS:528:DC%2BD3MXmsF2jsQ%3D%3D
    • Cornforth MN, Eberle RL (2001) Termini of human chromosomes display elevated rates of mitotic recombination. Mutagenesis 16(1):85-89
    • (2001) Mutagenesis , vol.16 , Issue.1 , pp. 85-89
    • Cornforth, M.N.1    Eberle, R.L.2
  • 17
    • 77954402321 scopus 로고    scopus 로고
    • Inversion variants in the human genome: Role in disease and genome architecture
    • 20156332 10.1186/gm132
    • Feuk L (2010) Inversion variants in the human genome: role in disease and genome architecture. Genome Med 2(2):11
    • (2010) Genome Med , vol.2 , Issue.2 , pp. 11
    • Feuk, L.1
  • 18
    • 0027503561 scopus 로고
    • Strand-specific FISH reveals orientation of chromosome 18 alphoid DNA
    • 8467711 10.1159/000133516 1:STN:280:DyaK3s3itlCqtA%3D%3D
    • Goodwin E, Meyne J (1993) Strand-specific FISH reveals orientation of chromosome 18 alphoid DNA. Cytogenet Cell Genet 63(2):126-127
    • (1993) Cytogenet Cell Genet , vol.63 , Issue.2 , pp. 126-127
    • Goodwin, E.1    Meyne, J.2
  • 19
    • 0030068868 scopus 로고    scopus 로고
    • On the origin of lateral asymmetry
    • 8575246 10.1007/BF00337223 1:STN:280:DyaK287mtlSltA%3D%3D
    • Goodwin EH, Meyne J, Bailey SM, Quigley D (1996) On the origin of lateral asymmetry. Chromosoma 104(5):345-347
    • (1996) Chromosoma , vol.104 , Issue.5 , pp. 345-347
    • Goodwin, E.H.1    Meyne, J.2    Bailey, S.M.3    Quigley, D.4
  • 22
    • 0023036623 scopus 로고
    • The t(8; 14) chromosomal translocation occurring in B-cell malignancies results from mistakes in V-D-J joining
    • 3097550 10.1038/324158a0 1:CAS:528:DyaL2sXivVCjtg%3D%3D
    • Haluska FG, Finver S, Tsujimoto Y, Croce CM (1986) The t(8; 14) chromosomal translocation occurring in B-cell malignancies results from mistakes in V-D-J joining. Nature 324(6093):158-161
    • (1986) Nature , vol.324 , Issue.6093 , pp. 158-161
    • Haluska, F.G.1    Finver, S.2    Tsujimoto, Y.3    Croce, C.M.4
  • 24
    • 84866410479 scopus 로고    scopus 로고
    • Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing
    • 10.1016/j.cell.2012.08.029
    • Imielinske M (2012) Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing. Cell 150:1107-1120
    • (2012) Cell , vol.150 , pp. 1107-1120
    • Imielinske, M.1
  • 26
    • 0034089849 scopus 로고    scopus 로고
    • Use of dual-color interphase FISH for the detection of inv(16) in acute myeloid leukemia at diagnosis, relapse and during follow-up: A study of 23 patients
    • 10720127 10.1038/sj.leu.2401678 1:CAS:528:DC%2BD3cXit1aksbs%3D
    • Mancini M, Cedrone M, Diverio D, Emanuel B, Stul M, Vranckx H, Brama M, De Cuia MR, Nanni M, Fazi F, Mecucci C, Alimena G, Hagemeijer A (2000) Use of dual-color interphase FISH for the detection of inv(16) in acute myeloid leukemia at diagnosis, relapse and during follow-up: a study of 23 patients. Leukemia 14(3):364-368
    • (2000) Leukemia , vol.14 , Issue.3 , pp. 364-368
    • Mancini, M.1    Cedrone, M.2    Diverio, D.3    Emanuel, B.4    Stul, M.5    Vranckx, H.6    Brama, M.7    De Cuia, M.R.8    Nanni, M.9    Fazi, F.10    Mecucci, C.11    Alimena, G.12    Hagemeijer, A.13
  • 27
    • 78649635514 scopus 로고    scopus 로고
    • Array-based technology and recommendations for utilization in medical genetics practice for detection of chromosomal abnormalities
    • 20962661 10.1097/GIM.0b013e3181f8baad 1:CAS:528:DC%2BC3cXhsVWhurrN
    • Manning M, Hudgins L (2010) Array-based technology and recommendations for utilization in medical genetics practice for detection of chromosomal abnormalities. Genet Med 12(11):742-745
    • (2010) Genet Med , vol.12 , Issue.11 , pp. 742-745
    • Manning, M.1    Hudgins, L.2
  • 28
    • 0034125650 scopus 로고    scopus 로고
    • Recurrent chromosome aberrations in cancer
    • 10767636 1:CAS:528:DC%2BD3cXisVKgt78%3D
    • Mitelman F (2000) Recurrent chromosome aberrations in cancer. Mutat Res 462(2-3):247-253
    • (2000) Mutat Res , vol.462 , Issue.2-3 , pp. 247-253
    • Mitelman, F.1
  • 29
    • 0029076085 scopus 로고
    • Comparison of gamma-ray-induced chromosome ring and inversion frequencies
    • 7631010 10.2307/3579154 1:STN:280:DyaK2MzlslCrsw%3D%3D
    • Muhlmann-Diaz MC, Bedford JS (1995) Comparison of gamma-ray-induced chromosome ring and inversion frequencies. Radiat Res 143(2):175-180
    • (1995) Radiat Res , vol.143 , Issue.2 , pp. 175-180
    • Muhlmann-Diaz, M.C.1    Bedford, J.S.2
  • 30
    • 0000286732 scopus 로고
    • A minute chromosome in chronic granulocytic leukemia
    • Nowell P, Hungerford D (1960) A minute chromosome in chronic granulocytic leukemia. Science 132(3438)
    • (1960) Science , vol.132 , pp. 3438
    • Nowell, P.1    Hungerford, D.2
  • 31
    • 0015694748 scopus 로고
    • Letter: A new consistent chromosomal abnormality in chronic myelogenous leukaemia identified by quinacrine fluorescence and Giemsa staining
    • 4126434 10.1038/243290a0 1:STN:280:DyaE2c%2Fgs1eksw%3D%3D
    • Rowley JD (1973) Letter: a new consistent chromosomal abnormality in chronic myelogenous leukaemia identified by quinacrine fluorescence and Giemsa staining. Nature 243(5405):290-293
    • (1973) Nature , vol.243 , Issue.5405 , pp. 290-293
    • Rowley, J.D.1
  • 32
    • 0025350542 scopus 로고
    • Molecular cytogenetics: Rosetta stone for understanding cancer - Twenty-ninth G. H. A. Clowes memorial award lecture
    • 2191766 1:CAS:528:DyaK3cXkvFajsbY%3D
    • Rowley JD (1990) Molecular cytogenetics: Rosetta stone for understanding cancer - twenty-ninth G. H. A. Clowes memorial award lecture. Cancer Res 50(13):3816-3825
    • (1990) Cancer Res , vol.50 , Issue.13 , pp. 3816-3825
    • Rowley, J.D.1
  • 33
    • 0017650409 scopus 로고
    • Application of chromosome banding techniques to the study of primary chromosome structural changes
    • 73589 10.1136/jmg.14.5.362 1:STN:280:DyaE1c%2FmvFWhtg%3D%3D
    • Savage JR (1977a) Application of chromosome banding techniques to the study of primary chromosome structural changes. J Med Genet 14(5):362-370
    • (1977) J Med Genet , vol.14 , Issue.5 , pp. 362-370
    • Savage, J.R.1
  • 34
    • 0017770201 scopus 로고
    • Assignment of aberration breakpoints in banded chromosomes
    • 593369 10.1038/270513a0 1:STN:280:DyaE1c%2FntFOlsA%3D%3D
    • Savage JRK (1977b) Assignment of aberration breakpoints in banded chromosomes. Nature 270:513-514
    • (1977) Nature , vol.270 , pp. 513-514
    • Savage, J.R.K.1
  • 35
    • 0029912473 scopus 로고    scopus 로고
    • Karyotyping human chromosomes by combinatorial multi-fluor FISH
    • 8630489 10.1038/ng0496-368 1:CAS:528:DyaK28XjtFaju7g%3D
    • Speicher MR, Ballard SG, Ward DC (1996) Karyotyping human chromosomes by combinatorial multi-fluor FISH. Nat Genet 12(4):368-375
    • (1996) Nat Genet , vol.12 , Issue.4 , pp. 368-375
    • Speicher, M.R.1    Ballard, S.G.2    Ward, D.C.3
  • 38
    • 4444227318 scopus 로고    scopus 로고
    • Asynchronous replication timing of telomeres at opposite arms of mammalian chromosomes
    • 15322275 10.1073/pnas.0404106101 1:CAS:528:DC%2BD2cXnslClu7w%3D
    • Zou Y, Gryaznov SM, Shay JW, Wright WE, Cornforth MN (2004) Asynchronous replication timing of telomeres at opposite arms of mammalian chromosomes. Proc Natl Acad Sci U S A 101(35):12928-12933
    • (2004) Proc Natl Acad Sci U S A , vol.101 , Issue.35 , pp. 12928-12933
    • Zou, Y.1    Gryaznov, S.M.2    Shay, J.W.3    Wright, W.E.4    Cornforth, M.N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.