Automated genome annotation and metabolic model reconstruction in the SEED and model SEED

Methods in Molecular Biology

Volumn 985, Issue , 2013, Pages 17-45

  Devoid, Scott ^a   Overbeek, Ross ^b   DeJongh, Matthew ^c   Vonstein, Veronika ^b   Best, Aaron A ^c   Henry, Christopher ^a  

^a ARGONNE NATIONAL LABORATORY   (United States)

^b Fellowship for Interpretation of Genomes   (United States)

^c HOPE COLLEGE   (United States)

Author keywords

Automated metabolic model reconstruction; Flux balance analysis; Gap filling; Microbial metabolism; Model SEED; RAST; Systems metabolic engineering

Indexed keywords

ARTICLE; BACTERIAL GENOME; BIOLOGICAL MODEL; COMPUTER INTERFACE; COMPUTER PROGRAM; DNA SEQUENCE; GENETIC DATABASE; GENETICS; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; ONLINE SYSTEM;

DATABASES, GENETIC; GENOME, BACTERIAL; METABOLIC NETWORKS AND PATHWAYS; MODELS, GENETIC; MOLECULAR SEQUENCE ANNOTATION; ONLINE SYSTEMS; SEQUENCE ANALYSIS, DNA; SOFTWARE; USER-COMPUTER INTERFACE;

MLCS; MLOWN;

EID: 84880528485     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-299-5_2     Document Type: Article

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