메뉴 건너뛰기




Volumn 97, Issue 15, 2013, Pages 7015-7033

Higher diversity of ammonia/ammonium-oxidizing prokaryotes in constructed freshwater wetland than natural coastal marine wetland

Author keywords

Ammonia oxidizing archaea; Ammonia oxidizing bacteria; amoA; Anammox bacteria; Diversity; Mangrove; Subtropical; Wetland

Indexed keywords

AMMONIA OXIDIZING BACTERIA; AMMONIA-OXIDIZING ARCHAEA; AMOA; ANAMMOX BACTERIA; DIVERSITY; MANGROVE; SUBTROPICAL;

EID: 84880513197     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-012-4430-4     Document Type: Article
Times cited : (95)

References (83)
  • 1
    • 51349088322 scopus 로고    scopus 로고
    • Evidence that ammonia-oxidizing archaea are more abundant than ammonia-oxidizing bacteria in semiarid soils of northern Arizona, USA
    • 10.1007/s00248-007-9360-9 1:CAS:528:DC%2BD1cXhtVOntrzM 18204798
    • Adair KL, Schwartz E (2008) Evidence that ammonia-oxidizing archaea are more abundant than ammonia-oxidizing bacteria in semiarid soils of northern Arizona, USA. Microb Ecol 56:420-426
    • (2008) Microb Ecol , vol.56 , pp. 420-426
    • Adair, K.L.1    Schwartz, E.2
  • 3
    • 52949087143 scopus 로고    scopus 로고
    • Community composition of ammonia-oxidizing bacteria and archaea in soils under stands of red alder and Douglas fir in Oregon
    • 10.1111/j.1462-2920.2008.01600.x 1:CAS:528:DC%2BD1cXhtlGitrnE 18393992
    • Boyle-Yarwood SA, Bottomley PJ, Myrold DD (2008) Community composition of ammonia-oxidizing bacteria and archaea in soils under stands of red alder and Douglas fir in Oregon. Environ Microbiol 10:2956-2965
    • (2008) Environ Microbiol , vol.10 , pp. 2956-2965
    • Boyle-Yarwood, S.A.1    Bottomley, P.J.2    Myrold, D.D.3
  • 4
    • 33847752606 scopus 로고    scopus 로고
    • New developments in the marine nitrogen cycle
    • 10.1021/cr050377t 1:CAS:528:DC%2BD2sXhs1Sqsrw%3D 17300141
    • Brandes JA, Devol AH, Deutsch C (2007) New developments in the marine nitrogen cycle. Chem Rev 107:577-589
    • (2007) Chem Rev , vol.107 , pp. 577-589
    • Brandes, J.A.1    Devol, A.H.2    Deutsch, C.3
  • 5
    • 0036276617 scopus 로고    scopus 로고
    • Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice
    • 10.1128/AEM.68.6.3067-3075.2002 1:CAS:528:DC%2BD38XksVWqtL4%3D 12039768
    • Briones AM, Okabe S, Umemiya Y, Ramsing N-B, Reichardt W, Okuyama H (2002) Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice. Appl Environ Microbiol 68:3067-3075
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3067-3075
    • Briones, A.M.1    Okabe, S.2    Umemiya, Y.3    Ramsing, N.-B.4    Reichardt, W.5    Okuyama, H.6
  • 6
    • 39149118031 scopus 로고    scopus 로고
    • Mesophilic Crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota
    • 10.1038/nrmicro1852 1:CAS:528:DC%2BD1cXhvFCgtLo%3D
    • Brochier-Armanet C, Boussau B, Gribaldo S, Forterre P (2008) Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Micro 6:245-252
    • (2008) Nat Rev Micro , vol.6 , pp. 245-252
    • Brochier-Armanet, C.1    Boussau, B.2    Gribaldo, S.3    Forterre, P.4
  • 7
    • 79955487255 scopus 로고    scopus 로고
    • Responses of aerobic and anaerobic ammonia/ammonium-oxidizing microorganisms to anthropogenic pollution in coastal marine environments
    • 10.1016/B978-0-12-386489-5.00002-6 1:CAS:528:DC%2BC3MXoslers7g%3D 21514459
    • Cao H, Li M, Dang H, Gu J-D (2011a) Responses of aerobic and anaerobic ammonia/ammonium-oxidizing microorganisms to anthropogenic pollution in coastal marine environments. Methods Enzymol 496:35-62
    • (2011) Methods Enzymol , vol.496 , pp. 35-62
    • Cao, H.1    Li, M.2    Dang, H.3    Gu, J.-D.4
  • 8
    • 79955513133 scopus 로고    scopus 로고
    • Diversity and abundance of ammonia-oxidizing archaea and bacteria in polluted mangrove sediment
    • 10.1016/j.syapm.2010.11.023 1:CAS:528:DC%2BC3MXhtlCiu7zE 21665398
    • Cao H, Li M, Hong Y, Gu J-D (2011b) Diversity and abundance of ammonia-oxidizing archaea and bacteria in polluted mangrove sediment. Syst Appl Microbiol 34:513-523
    • (2011) Syst Appl Microbiol , vol.34 , pp. 513-523
    • Cao, H.1    Li, M.2    Hong, Y.3    Gu, J.-D.4
  • 9
    • 84858438521 scopus 로고    scopus 로고
    • Community shift of ammonia-oxidizing bacteria along an anthropogenic pollution gradient from the Pearl River Delta to the South China Sea
    • Cao H, Hong Y, Li M, Gu J-D (2012) Community shift of ammonia-oxidizing bacteria along an anthropogenic pollution gradient from the Pearl River Delta to the South China Sea. Appl Microbiol Biotechnol 94:247-259
    • (2012) Appl Microbiol Biotechnol , vol.94 , pp. 247-259
    • Cao, H.1    Hong, Y.2    Li, M.3    Gu, J.-D.4
  • 10
    • 58149332207 scopus 로고    scopus 로고
    • Ammonia-oxidizing archaea: Important players in paddy rhizosphere soil?
    • 10.1111/j.1462-2920.2008.01613.x 1:CAS:528:DC%2BD1cXpsFOqtrs%3D 18430011
    • Chen X-P, Zhu Y-G, Xia Y, Shen J-P, He J-Z (2008) Ammonia-oxidizing archaea: important players in paddy rhizosphere soil? Environ Microbiol 10:1978-1987
    • (2008) Environ Microbiol , vol.10 , pp. 1978-1987
    • Chen, X.-P.1    Zhu, Y.-G.2    Xia, Y.3    Shen, J.-P.4    He, J.-Z.5
  • 13
    • 65349094528 scopus 로고    scopus 로고
    • Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary
    • 10.1111/j.1462-2920.2008.01850.x 1:CAS:528:DC%2BD1MXmsVeqtb8%3D 19161435
    • Dale OR, Tobias CR, Song B (2009) Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary. Environ Microbiol 11:1194-1207
    • (2009) Environ Microbiol , vol.11 , pp. 1194-1207
    • Dale, O.R.1    Tobias, C.R.2    Song, B.3
  • 14
    • 78149442933 scopus 로고    scopus 로고
    • Environmental factors shape sediment anammox bacterial communities in hypernutrified Jiaozhou Bay, China
    • 10.1128/AEM.01264-10 1:CAS:528:DC%2BC3MXkvVGg 20833786
    • Dang H, Chen R, Wang L, Guo L, Chen P, Tang Z, Tian F, Li S, Klotz MG (2010) Environmental factors shape sediment anammox bacterial communities in hypernutrified Jiaozhou Bay, China. Appl Environ Microbiol 76:7036-7047
    • (2010) Appl Environ Microbiol , vol.76 , pp. 7036-7047
    • Dang, H.1    Chen, R.2    Wang, L.3    Guo, L.4    Chen, P.5    Tang, Z.6    Tian, F.7    Li, S.8    Klotz, M.G.9
  • 15
    • 70149118163 scopus 로고    scopus 로고
    • Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils
    • 10.1038/ngeo613 1:CAS:528:DC%2BD1MXhtVKktLbE
    • Di HJ, Cameron KC, Shen JP, Winefield CS, O'Callaghan M, Bowatte S, He JZ (2009) Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils. Nat Geosci 2:621-624
    • (2009) Nat Geosci , vol.2 , pp. 621-624
    • Di, H.J.1    Cameron, K.C.2    Shen, J.P.3    Winefield, C.S.4    O'Callaghan, M.5    Bowatte, S.6    He, J.Z.7
  • 16
    • 82555161603 scopus 로고    scopus 로고
    • Positive feedback between acidification and organic phosphate mineralization in the rhizosphere of maize (Zea mays L.)
    • 10.1007/s11104-011-0783-1 1:CAS:528:DC%2BC3MXhsFKntLnN
    • Ding X, Fu L, Liu C, Chen F, Hoffland E, Shen J, Zhang F, Feng G (2011) Positive feedback between acidification and organic phosphate mineralization in the rhizosphere of maize (Zea mays L.). Plant Soil 349:13-24
    • (2011) Plant Soil , vol.349 , pp. 13-24
    • Ding, X.1    Fu, L.2    Liu, C.3    Chen, F.4    Hoffland, E.5    Shen, J.6    Zhang, F.7    Feng, G.8
  • 17
    • 26844541457 scopus 로고    scopus 로고
    • Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
    • 10.1073/pnas.0506625102 1:CAS:528:DC%2BD2MXhtFKjsb7J 16186488
    • Francis CA, Roberts KJ, Beman JM, Alyson ES, Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci 102:14683-14688
    • (2005) Proc Natl Acad Sci , vol.102 , pp. 14683-14688
    • Francis, C.A.1    Roberts, K.J.2    Beman, J.M.3    Alyson, E.S.4    Oakley, B.B.5
  • 18
    • 78149396555 scopus 로고    scopus 로고
    • Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment
    • 10.1111/j.1574-6941.2010.00970.x 1:CAS:528:DC%2BC3cXhsFKmsrvP 21039652
    • Glaser K, Hackl E, Inselsbacher E, Strauss J, Wanek W, Zechmeister-Boltenstern S, Sessitsch A (2010) Dynamics of ammonia-oxidizing communities in barley-planted bulk soil and rhizosphere following nitrate and ammonium fertilizer amendment. FEMS Microbiol Ecol 74:575-591
    • (2010) FEMS Microbiol Ecol , vol.74 , pp. 575-591
    • Glaser, K.1    Hackl, E.2    Inselsbacher, E.3    Strauss, J.4    Wanek, W.5    Zechmeister-Boltenstern, S.6    Sessitsch, A.7
  • 19
    • 85069595516 scopus 로고    scopus 로고
    • Natural wetlands
    • J. Sven Erik F. Brian (eds) Academic Oxford 10.1016/B978-008045405-4. 00067-7
    • Gopal B, Ghosh D (2008) Natural wetlands. In: Sven Erik J, Brian F (eds) Encyclopedia of ecology. Academic, Oxford, pp 2493-2504
    • (2008) Encyclopedia of Ecology , pp. 2493-2504
    • Gopal, B.1    Ghosh, D.2
  • 20
    • 73449128271 scopus 로고    scopus 로고
    • Fast UniFrac: Facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
    • 10.1038/ismej.2009.97 19710709
    • Hamady M, Lozupone C, Knight R (2009) Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. ISME J 4:17-27
    • (2009) ISME J , vol.4 , pp. 17-27
    • Hamady, M.1    Lozupone, C.2    Knight, R.3
  • 21
    • 70449722860 scopus 로고    scopus 로고
    • Water column anammox and denitrification in a temperate permanently stratified lake (Lake Rassnitzer, Germany)
    • 10.1016/j.syapm.2009.07.009 1:CAS:528:DC%2BC3cXhsFCmt70%3D 19716251
    • Hamersley MR, Woebken D, Boehrer B, Schultze M, Lavik G, Kuypers MMM (2009) Water column anammox and denitrification in a temperate permanently stratified lake (Lake Rassnitzer, Germany). Syst Appl Microbiol 32:571-582
    • (2009) Syst Appl Microbiol , vol.32 , pp. 571-582
    • Hamersley, M.R.1    Woebken, D.2    Boehrer, B.3    Schultze, M.4    Lavik, G.5    Kuypers, M.M.M.6
  • 23
    • 44249087866 scopus 로고    scopus 로고
    • Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte Littorella uniflora
    • 10.1128/AEM.02802-07 1:CAS:528:DC%2BD1cXmsVOku7c%3D 18344332
    • Herrmann M, Saunders AM, Schramm A (2008) Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte Littorella uniflora. Appl Environ Microbiol 74:3279-3283
    • (2008) Appl Environ Microbiol , vol.74 , pp. 3279-3283
    • Herrmann, M.1    Saunders, A.M.2    Schramm, A.3
  • 24
    • 66249103693 scopus 로고    scopus 로고
    • Effect of lake trophic status and rooted macrophytes on community composition and abundance of ammonia-oxidizing prokaryotes in freshwater sediments
    • 10.1128/AEM.02806-08 1:CAS:528:DC%2BD1MXmsFWisLs%3D 19304820
    • Herrmann M, Saunders AM, Schramm A (2009) Effect of lake trophic status and rooted macrophytes on community composition and abundance of ammonia-oxidizing prokaryotes in freshwater sediments. Appl Environ Microbiol 75:3127-3136
    • (2009) Appl Environ Microbiol , vol.75 , pp. 3127-3136
    • Herrmann, M.1    Saunders, A.M.2    Schramm, A.3
  • 25
    • 79951511604 scopus 로고    scopus 로고
    • Anammox bacterial diversity in various aquatic ecosystems based on the detection of hydrazine oxidase genes (hzoA/hzoB)
    • 10.1007/s00248-010-9743-1 1:CAS:528:DC%2BC3MXhvVClu7k%3D 20838786
    • Hirsch M, Long Z, Song B (2011) Anammox bacterial diversity in various aquatic ecosystems based on the detection of hydrazine oxidase genes (hzoA/hzoB). Microb Ecol 61:264-276
    • (2011) Microb Ecol , vol.61 , pp. 264-276
    • Hirsch, M.1    Long, Z.2    Song, B.3
  • 26
    • 79960583718 scopus 로고    scopus 로고
    • Residence of habitat-specific anammox bacteria in the deep-sea subsurface sediments of the South China Sea: Analyses of marker gene abundance with physical chemical parameters
    • 10.1007/s00248-011-9849-0 21491114
    • Hong Y-G, Li M, Cao H, Gu J-D (2011) Residence of habitat-specific anammox bacteria in the deep-sea subsurface sediments of the South China Sea: analyses of marker gene abundance with physical chemical parameters. Microb Ecol 62:36-47
    • (2011) Microb Ecol , vol.62 , pp. 36-47
    • Hong, Y.-G.1    Li, M.2    Cao, H.3    Gu, J.-D.4
  • 27
    • 77149154647 scopus 로고    scopus 로고
    • Molecular detection of anammox bacteria in terrestrial ecosystems: Distribution and diversity
    • 10.1038/ismej.2009.125 20010634
    • Humbert S, Tarnawski S, Fromin N, Mallet M-P, Aragno M, Zopfi J (2009) Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity. ISME J 4:450-454
    • (2009) ISME J , vol.4 , pp. 450-454
    • Humbert, S.1    Tarnawski, S.2    Fromin, N.3    Mallet, M.-P.4    Aragno, M.5    Zopfi, J.6
  • 31
    • 67649939034 scopus 로고    scopus 로고
    • Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil
    • 10.1111/j.1462-2920.2009.01891.x 1:CAS:528:DC%2BD1MXptlyhurs%3D 19236445
    • Jia Z, Conrad R (2009) Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. Environ Microbiol 11:1658-1671
    • (2009) Environ Microbiol , vol.11 , pp. 1658-1671
    • Jia, Z.1    Conrad, R.2
  • 32
    • 33750311308 scopus 로고    scopus 로고
    • Adaptation of a freshwater anammox population to high salinity wastewater
    • 10.1016/j.jbiotec.2006.05.012 1:CAS:528:DC%2BD28XhtFeqtL7I 16806555
    • Kartal B, Koleva M, Arsov R, van der Star W, Jetten MSM, Strous M (2006) Adaptation of a freshwater anammox population to high salinity wastewater. J Biotechnol 126:546-553
    • (2006) J Biotechnol , vol.126 , pp. 546-553
    • Kartal, B.1    Koleva, M.2    Arsov, R.3    Van Der Star, W.4    Jetten, M.S.M.5    Strous, M.6
  • 34
    • 77952135313 scopus 로고    scopus 로고
    • Sewage treatment with anammox
    • 10.1126/science.1185941 1:CAS:528:DC%2BC3cXmsVCktL0%3D 20448175
    • Kartal B, Kuenen JG, van Loosdrecht MCM (2010) Sewage treatment with anammox. Science 328:702-703
    • (2010) Science , vol.328 , pp. 702-703
    • Kartal, B.1    Kuenen, J.G.2    Van Loosdrecht, M.C.M.3
  • 36
    • 0034775280 scopus 로고    scopus 로고
    • Ammonia-oxidizing bacteria: A model for molecular microbial ecology
    • 10.1146/annurev.micro.55.1.485 1:CAS:528:DC%2BD3MXnslKjtLs%3D 11544365
    • Kowalchuk GA, Stephen JR (2001) Ammonia-oxidizing bacteria: a model for molecular microbial ecology. Annu Rev Microbiol 55:485-529
    • (2001) Annu Rev Microbiol , vol.55 , pp. 485-529
    • Kowalchuk, G.A.1    Stephen, J.R.2
  • 37
    • 0032436805 scopus 로고    scopus 로고
    • Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide probe hybridisation
    • 10.1111/j.1574-6941.1998.tb00550.x 1:CAS:528:DyaK1MXis1Oluw%3D%3D
    • Kowalchuk GA, Bodelier PLE, Heilig GHJ, Stephen JR, Laanbroek HJ (1998) Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide probe hybridisation. FEMS Microbiol Ecol 27:339-350
    • (1998) FEMS Microbiol Ecol , vol.27 , pp. 339-350
    • Kowalchuk, G.A.1    Bodelier, P.L.E.2    Heilig, G.H.J.3    Stephen, J.R.4    Laanbroek, H.J.5
  • 40
    • 71849092993 scopus 로고    scopus 로고
    • Plant species influence microbial diversity and carbon allocation in the rhizosphere
    • 10.1016/j.soilbio.2009.10.009 1:CAS:528:DC%2BD1MXhsFyku7bE
    • Ladygina N, Hedlund K (2010) Plant species influence microbial diversity and carbon allocation in the rhizosphere. Soil Biol Biochem 42:162-168
    • (2010) Soil Biol Biochem , vol.42 , pp. 162-168
    • Ladygina, N.1    Hedlund, K.2
  • 42
    • 80053158633 scopus 로고    scopus 로고
    • Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil
    • 10.1073/pnas.1107196108 1:CAS:528:DC%2BC3MXht1emtbzK 21896746
    • Lehtovirta-Morley LE, Stoecker K, Vilcinskas A, Prosser JI, Nicol GW (2011) Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil. Proc Natl Acad Sci 108:15892-15897
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 15892-15897
    • Lehtovirta-Morley, L.E.1    Stoecker, K.2    Vilcinskas, A.3    Prosser, J.I.4    Nicol, G.W.5
  • 43
    • 78149471109 scopus 로고    scopus 로고
    • Molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in high-temperature petroleum reservoirs
    • 10.1007/s00248-010-9733-3 1:CAS:528:DC%2BC3cXhtlyrsrbI 20740282
    • Li H, Chen S, Mu BZ, Gu J-D (2010a) Molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in high-temperature petroleum reservoirs. Microb Ecol 60:771-783
    • (2010) Microb Ecol , vol.60 , pp. 771-783
    • Li, H.1    Chen, S.2    Mu, B.Z.3    Gu, J.-D.4
  • 44
    • 77249133557 scopus 로고    scopus 로고
    • A comparison of primer sets for detecting 16S rRNA and hydrazine oxidoreductase genes of anaerobic ammonium-oxidizing bacteria in marine sediments
    • 10.1007/s00253-009-2361-5 1:CAS:528:DC%2BC3cXit1amsb8%3D 20107988
    • Li M, Hong Y, Klotz M, Gu J-D (2010b) A comparison of primer sets for detecting 16S rRNA and hydrazine oxidoreductase genes of anaerobic ammonium-oxidizing bacteria in marine sediments. Appl Microbiol Biotechnol 86:781-790
    • (2010) Appl Microbiol Biotechnol , vol.86 , pp. 781-790
    • Li, M.1    Hong, Y.2    Klotz, M.3    Gu, J.-D.4
  • 45
    • 79955564819 scopus 로고    scopus 로고
    • Advances in methods for detection of anaerobic ammonium oxidizing (anammox) bacteria
    • Li M, Gu J-D (2011) Advances in methods for detection of anaerobic ammonium oxidizing (anammox) bacteria. Appl Microbiol Biotechnol 90:1241-1252
    • (2011) Appl Microbiol Biotechnol , vol.90 , pp. 1241-1252
    • Li, M.1    Gu, J.-D.2
  • 46
    • 79954464368 scopus 로고    scopus 로고
    • Cytochrome cd1-containing nitrite reductase encoding gene nirS as a new functional biomarker for detection of anaerobic ammonium oxidizing (anammox) bacteria
    • 10.1021/es103826w 1:CAS:528:DC%2BC3MXjsFKgtLg%3D 21417444
    • Li M, Ford T, Li X, Gu J-D (2011a) Cytochrome cd1-containing nitrite reductase encoding gene nirS as a new functional biomarker for detection of anaerobic ammonium oxidizing (anammox) bacteria. Environ Sci Technol 45:3547-3553
    • (2011) Environ Sci Technol , vol.45 , pp. 3547-3553
    • Li, M.1    Ford, T.2    Li, X.3    Gu, J.-D.4
  • 47
    • 80054942788 scopus 로고    scopus 로고
    • Mangrove trees affect the community structure and distribution of anammox bacteria at an anthropogenic-polluted mangrove in the Pearl River Delta reflected by 16S rRNA and hydrazine oxidoreductase (HZO) encoding gene analyses
    • 10.1007/s10646-011-0711-4 1:CAS:528:DC%2BC3MXhtlagtrvO 21735127
    • Li M, Hong Y-G, Cao H-L, Gu J-D (2011b) Mangrove trees affect the community structure and distribution of anammox bacteria at an anthropogenic-polluted mangrove in the Pearl River Delta reflected by 16S rRNA and hydrazine oxidoreductase (HZO) encoding gene analyses. Ecotoxicology 20:1780-1790
    • (2011) Ecotoxicology , vol.20 , pp. 1780-1790
    • Li, M.1    Hong, Y.-G.2    Cao, H.-L.3    Gu, J.-D.4
  • 48
    • 34548273488 scopus 로고    scopus 로고
    • Low-molecular-weight organic acids exuded by mangrove (Kandelia candel (L.) Druce) roots and their effect on cadmium species change in the rhizosphere
    • 10.1016/j.envexpbot.2007.05.007 1:CAS:528:DC%2BD2sXpvF2qtb0%3D
    • Lu H, Yan C, Liu J (2007) Low-molecular-weight organic acids exuded by mangrove (Kandelia candel (L.) Druce) roots and their effect on cadmium species change in the rhizosphere. Environ Exp Bot 61:159-166
    • (2007) Environ Exp Bot , vol.61 , pp. 159-166
    • Lu, H.1    Yan, C.2    Liu, J.3
  • 49
    • 70350052417 scopus 로고    scopus 로고
    • Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
    • 10.1038/nature08465 1:CAS:528:DC%2BD1MXhtF2kurrL 19794413
    • Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA (2009) Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 461:976-979
    • (2009) Nature , vol.461 , pp. 976-979
    • Martens-Habbena, W.1    Berube, P.M.2    Urakawa, H.3    De La Torre, J.R.4    Stahl, D.A.5
  • 50
    • 77955390392 scopus 로고    scopus 로고
    • Assessing the cost-effectiveness of the water purification function of wetlands for environmental planning
    • 10.1016/j.ecocom.2010.02.006
    • Michael T (2010) Assessing the cost-effectiveness of the water purification function of wetlands for environmental planning. Ecol Complex 7:320-326
    • (2010) Ecol Complex , vol.7 , pp. 320-326
    • Michael, T.1
  • 51
    • 0028940437 scopus 로고
    • Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor
    • 10.1111/j.1574-6941.1995.tb00281.x 1:CAS:528:DyaK2MXktlCjtLg%3D
    • Mulder A, van de Graaf AA, Robertson LA, Kuenen JG (1995) Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor. FEMS Microbiol Ecol 16:177-183
    • (1995) FEMS Microbiol Ecol , vol.16 , pp. 177-183
    • Mulder, A.1    Van De Graaf, A.A.2    Robertson, L.A.3    Kuenen, J.G.4
  • 53
    • 4344569176 scopus 로고    scopus 로고
    • Nitrification-denitrification dynamics and community structure of ammonia oxidizing bacteria in a high yield irrigated Philippine rice field
    • 10.1016/j.femsec.2004.04.015 1:CAS:528:DC%2BD2cXmvFWrsLY%3D 19712286
    • Nicolaisen MH, Risgaard-Petersen N, Revsbech NP, Reichardt W, Ramsing NB (2004) Nitrification-denitrification dynamics and community structure of ammonia oxidizing bacteria in a high yield irrigated Philippine rice field. FEMS Microbiol Ecol 49:359-369
    • (2004) FEMS Microbiol Ecol , vol.49 , pp. 359-369
    • Nicolaisen, M.H.1    Risgaard-Petersen, N.2    Revsbech, N.P.3    Reichardt, W.4    Ramsing, N.B.5
  • 54
    • 45849132048 scopus 로고    scopus 로고
    • Diurnal redox fluctuation and microbial activity in the rhizosphere of wetland plants
    • 10.1016/j.ejsobi.2008.01.003 1:CAS:528:DC%2BD1cXnvVGqsLs%3D
    • Nikolausz M, Kappelmeyer U, Székely A, Rusznyák A, Márialigeti K, Kästner M (2008) Diurnal redox fluctuation and microbial activity in the rhizosphere of wetland plants. Eur J Soil Biol 44:324-333
    • (2008) Eur J Soil Biol , vol.44 , pp. 324-333
    • Nikolausz, M.1    Kappelmeyer, U.2    Székely, A.3    Rusznyák, A.4    Márialigeti, K.5    Kästner, M.6
  • 55
    • 0019783470 scopus 로고
    • Changes of pH across the rhizosphere induced by roots
    • 10.1007/BF02277359 1:CAS:528:DyaL3MXls1OksL4%3D
    • Nye P (1981) Changes of pH across the rhizosphere induced by roots. Plant Soil 61:7-26
    • (1981) Plant Soil , vol.61 , pp. 7-26
    • Nye, P.1
  • 56
    • 0032976059 scopus 로고    scopus 로고
    • In situ analysis of nitrifying biofilms as determined by in situ hybridization and the use of microelectrodes
    • 1:CAS:528:DyaK1MXktlemu74%3D 10388720
    • Okabe S, Satoh H, Watanabe Y (1999) In situ analysis of nitrifying biofilms as determined by in situ hybridization and the use of microelectrodes. Appl Environ Microbiol 65:3182-3191
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3182-3191
    • Okabe, S.1    Satoh, H.2    Watanabe, Y.3
  • 57
    • 33750042897 scopus 로고    scopus 로고
    • Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments
    • 10.1128/AEM.01254-06 1:CAS:528:DC%2BD28XhtFalsLbN 17021238
    • Penton CR, Devol AH, Tiedje JM (2006) Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments. Appl Environ Microbiol 72:6829-6832
    • (2006) Appl Environ Microbiol , vol.72 , pp. 6829-6832
    • Penton, C.R.1    Devol, A.H.2    Tiedje, J.M.3
  • 58
    • 79959289950 scopus 로고    scopus 로고
    • The Thaumarchaeota: An emerging view of their phylogeny and ecophysiology
    • 10.1016/j.mib.2011.04.007 1:CAS:528:DC%2BC3MXns12kurw%3D 21546306
    • Pester M, Schleper C, Wagner M (2011) The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 14:300-306
    • (2011) Curr Opin Microbiol , vol.14 , pp. 300-306
    • Pester, M.1    Schleper, C.2    Wagner, M.3
  • 59
    • 84856577796 scopus 로고    scopus 로고
    • AmoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions
    • 10.1111/j.1462-2920.2011.02666.x 1:CAS:528:DC%2BC38XksVamsb4%3D 22141924
    • Pester M, Rattei T, Flechl S, Gröngröft A, Richter A, Overmann J, Reinhold-Hurek B, Loy A, Wagner M (2012) amoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions. Environ Microbiol 14:525-539
    • (2012) Environ Microbiol , vol.14 , pp. 525-539
    • Pester, M.1    Rattei, T.2    Flechl, S.3    Gröngröft, A.4    Richter, A.5    Overmann, J.6    Reinhold-Hurek, B.7    Loy, A.8    Wagner, M.9
  • 60
    • 0029958365 scopus 로고    scopus 로고
    • Phylogenetic diversity within the genus Nitrosomonas
    • 10.1016/S0723-2020(96)80061-0
    • Pommerening-Röser A, Rath G, Koops HP (1996) Phylogenetic diversity within the genus Nitrosomonas. Syst Appl Microbiol 19:344-351
    • (1996) Syst Appl Microbiol , vol.19 , pp. 344-351
    • Pommerening-Röser, A.1    Rath, G.2    Koops, H.P.3
  • 61
    • 0034466757 scopus 로고    scopus 로고
    • Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: Implications for molecular diversity surveys
    • 10.1128/AEM.66.12.5368-5382.2000 1:CAS:528:DC%2BD3MXjsVygsro%3D 11097916
    • Purkhold U, Pommerening-Röser A, Juretschko S, Schmid MC, Koops H-P, Wagner M (2000) Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys. Appl Environ Microbiol 66:5368-5382
    • (2000) Appl Environ Microbiol , vol.66 , pp. 5368-5382
    • Purkhold, U.1    Pommerening-Röser, A.2    Juretschko, S.3    Schmid, M.C.4    Koops, H.-P.5    Wagner, M.6
  • 62
    • 52949144536 scopus 로고    scopus 로고
    • Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor
    • 10.1111/j.1462-2920.2008.01642.x 1:CAS:528:DC%2BD1cXhtlGitrfP 18479446
    • Quan Z-X, Rhee S-K, Zuo J-E, Yang Y, Bae J-W, Park JR, Lee S-T, Park Y-H (2008) Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor. Environ Microbiol 10:3130-3139
    • (2008) Environ Microbiol , vol.10 , pp. 3130-3139
    • Quan, Z.-X.1    Rhee, S.-K.2    Zuo, J.-E.3    Yang, Y.4    Bae, J.-W.5    Park, J.R.6    Lee, S.-T.7    Park, Y.-H.8
  • 63
    • 84859423097 scopus 로고    scopus 로고
    • Ammonia-oxidizing archaea as main drivers of nitrification in cold-water sponges
    • Radax R, Hoffmann F, Rapp HT, Leininger S, Schleper C (2012) Ammonia-oxidizing archaea as main drivers of nitrification in cold-water sponges. Environ Microbiol 14:909-923
    • (2012) Environ Microbiol , vol.14 , pp. 909-923
    • Radax, R.1    Hoffmann, F.2    Rapp, H.T.3    Leininger, S.4    Schleper, C.5
  • 64
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
    • 1:CAS:528:DyaK2sXnvV2rtr0%3D 9406389
    • Rotthauwe J, Witzel K, Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63:4704-4712
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4704-4712
    • Rotthauwe, J.1    Witzel, K.2    Liesack, W.3
  • 65
    • 0742285074 scopus 로고    scopus 로고
    • 2 production in Arctic Sea ice
    • 10.4319/lo.2004.49.1.0086 1:CAS:528:DC%2BD2cXhsVelt78%3D
    • 2 production in Arctic Sea ice. Limnol Oceanogr 49:86-94
    • (2004) Limnol Oceanogr , vol.49 , pp. 86-94
    • Rysgaard, S.1    Glud, R.N.2
  • 67
    • 77956095401 scopus 로고    scopus 로고
    • Ammonia oxidation: Different niches for bacteria and archaea?
    • 10.1038/ismej.2010.111 20631805
    • Schleper C (2010) Ammonia oxidation: different niches for bacteria and archaea? ISME J 4:1092-1094
    • (2010) ISME J , vol.4 , pp. 1092-1094
    • Schleper, C.1
  • 68
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • 10.1128/AEM.71.3.1501-1506.2005 1:CAS:528:DC%2BD2MXisVOisb8%3D 15746353
    • Schloss PD, Handelsman J (2005) Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71:1501-1506
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 72
    • 52949125936 scopus 로고    scopus 로고
    • Environmental detection of octahaem cytochrome c hydroxylamine/hydrazine oxidoreductase genes of aerobic and anaerobic ammonium-oxidizing bacteria
    • 10.1111/j.1462-2920.2008.01732.x 1:CAS:528:DC%2BD1cXhtlGitrfI 18973625
    • Schmid MC, Hooper AB, Klotz MG, Woebken D, Lam P, Kuypers MMM, Pommerening-Roeser A, Op den Camp HJM, Jetten MSM (2008) Environmental detection of octahaem cytochrome c hydroxylamine/hydrazine oxidoreductase genes of aerobic and anaerobic ammonium-oxidizing bacteria. Environ Microbiol 10:3140-3149
    • (2008) Environ Microbiol , vol.10 , pp. 3140-3149
    • Schmid, M.C.1    Hooper, A.B.2    Klotz, M.G.3    Woebken, D.4    Lam, P.5    Kuypers, M.M.M.6    Pommerening-Roeser, A.7    Op Den Camp, H.J.M.8    Jetten, M.S.M.9
  • 73
    • 33748305565 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika)
    • 10.1111/j.1462-2920.2006.01074.x 1:CAS:528:DC%2BD28XhtFams7fE 16958766
    • Schubert CJ, Durisch-Kaiser E, Wehrli B, Thamdrup B, Lam P, Kuypers MMM (2006) Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika). Environ Microbiol 8:1857-1863
    • (2006) Environ Microbiol , vol.8 , pp. 1857-1863
    • Schubert, C.J.1    Durisch-Kaiser, E.2    Wehrli, B.3    Thamdrup, B.4    Lam, P.5    Kuypers, M.M.M.6
  • 74
    • 33845595913 scopus 로고    scopus 로고
    • Effects of light intensity and water temperature on oxygen release from roots into water lettuce rhizosphere
    • 10.1016/j.watres.2006.10.009 1:CAS:528:DC%2BD28XhtlCmt7vM 17123569
    • Soda S, Ike M, Ogasawara Y, Yoshinaka M, Mishima D, Fujita M (2007) Effects of light intensity and water temperature on oxygen release from roots into water lettuce rhizosphere. Water Res 41:487-491
    • (2007) Water Res , vol.41 , pp. 487-491
    • Soda, S.1    Ike, M.2    Ogasawara, Y.3    Yoshinaka, M.4    Mishima, D.5    Fujita, M.6
  • 76
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 10.1093/molbev/msr121 1:CAS:528:DC%2BC3MXht1eiu73K 21546353
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 77
    • 84874354885 scopus 로고    scopus 로고
    • Dominance of Candidatus Scalindua species in anammox community revealed in soils with different duration of rice paddy cultivation in Northeast China
    • doi: 10.1007/s00253-012-4036-x
    • Wang J, Gu J-D (2012) Dominance of Candidatus Scalindua species in anammox community revealed in soils with different duration of rice paddy cultivation in Northeast China. Appl Microbiol Biotechnol. doi: 10.1007/s00253-012-4036-x
    • (2012) Appl Microbiol Biotechnol
    • Wang, J.1    Gu, J.-D.2
  • 78
    • 0000762497 scopus 로고
    • Investigations on nitrifying organisms
    • Winogradsky S (1890) Investigations on nitrifying organisms. Ann Inst Pasteur 4:213-321
    • (1890) Ann Inst Pasteur , vol.4 , pp. 213-321
    • Winogradsky, S.1
  • 79
    • 79960106693 scopus 로고    scopus 로고
    • Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils
    • 10.1128/AEM.00136-11 1:CAS:528:DC%2BC3MXptFWrtLw%3D 21571885
    • Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK (2011) Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Appl Environ Microbiol 77:4618-4625
    • (2011) Appl Environ Microbiol , vol.77 , pp. 4618-4625
    • Yao, H.1    Gao, Y.2    Nicol, G.W.3    Campbell, C.D.4    Prosser, J.I.5    Zhang, L.6    Han, W.7    Singh, B.K.8
  • 80
    • 34547684285 scopus 로고    scopus 로고
    • Diversity and abundance of aerobic and anaerobic ammonium-oxidizing bacteria in freshwater sediments of the Xinyi River (China)
    • 10.1111/j.1462-2920.2007.01357.x 1:CAS:528:DC%2BD2sXhtVyku7rF 17686033
    • Zhang Y, Ruan X-H, Op den Camp HJM, Smits TJM, Jetten MSM, Schmid MC (2007) Diversity and abundance of aerobic and anaerobic ammonium-oxidizing bacteria in freshwater sediments of the Xinyi River (China). Environ Microbiol 9:2375-2382
    • (2007) Environ Microbiol , vol.9 , pp. 2375-2382
    • Zhang, Y.1    Ruan, X.-H.2    Op Den Camp, H.J.M.3    Smits, T.J.M.4    Jetten, M.S.M.5    Schmid, M.C.6
  • 82
    • 69949104390 scopus 로고    scopus 로고
    • Constructed wetlands in China
    • 10.1016/j.ecoleng.2009.07.007
    • Zhang D, Gersberg RM, Keat TS (2009) Constructed wetlands in China. Ecol Eng 35:1367-1378
    • (2009) Ecol Eng , vol.35 , pp. 1367-1378
    • Zhang, D.1    Gersberg, R.M.2    Keat, T.S.3
  • 83
    • 84860402783 scopus 로고    scopus 로고
    • Impacts of Spartina alterniflora invasion on abundance and composition of ammonia oxidizers in estuarine sediment
    • 10.1007/s11368-011-0369-9
    • Zhang QF, Peng JJ, Chen Q, Li XF, Xu CY, Yin HB, Yu S (2011) Impacts of Spartina alterniflora invasion on abundance and composition of ammonia oxidizers in estuarine sediment. J Soils Sed 11:1020-1031
    • (2011) J Soils Sed , vol.11 , pp. 1020-1031
    • Zhang, Q.F.1    Peng, J.J.2    Chen, Q.3    Li, X.F.4    Xu, C.Y.5    Yin, H.B.6    Yu, S.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.