Colorimetric DNA based biosensor combined with loop-mediated isothermal amplification for detection of Mycobacterium tuberculosis by using gold nanoprobe aggregation

Sensors and Transducers

Volumn 149, Issue 2, 2013, Pages 123-128

  Kaewphinit, Thongchai ^a   Santiwatanakul, Somchai ^a   Chansiri, Kosum ^a  

^a SRINAKHARINWIROT UNIVERSITY   (Thailand)

Author keywords

AuNPs; Gold nanopaticles; LAMP; Loop mediated isothermal amplification; Mycobacterium tuberculosis

Indexed keywords

AUNPS; CONSTANT TEMPERATURE; DNA-BASED BIOSENSORS; GOLD NANOPARTICLE; LOOP-MEDIATED ISOTHERMAL AMPLIFICATIONS; MODIFIED OLIGONUCLEOTIDES; MYCOBACTERIUM TUBERCULOSIS; NANOPATICLES;

COLORIMETRY; DEVELOPING COUNTRIES; ELECTRIC LAMPS; GOLD; ISOTHERMS; OLIGONUCLEOTIDES; PROBES;

DNA;

EID: 84880386914     PISSN: None     EISSN: 17265479     Source Type: Trade Journal    
DOI: None     Document Type: Article

References (17)

1. N. Ahmed, AK. Mohanty, U. Mukhopadhyay, V. K. Batish, S. Grover. PCR-based rapid detection of Mycobacterium tuberculosis in blood from immunocompetent patients with pulmonary tuberculosis. J. Clin. Microbiol., Vol. 36, 1998, pp. 3094-3095.
2. A. Brisson-Noel, B. Gicquel, D. Lecossier, V. Levy-Frebault, X. Nassif, A. J. Hance, Rapid diagnosis of tuberculosis by amplification of mycobacterial DNA in clinical samples, Lancet, Vol. 2, 1992, pp. 1069-1071.
3. P. Khandekar, A. Amin, P. Reddy, J. Banwalikar, C. Shivannaure, V. Katoch, Evaluation of PCR-based test for the detection of Mycobacterium Tuberculosis in coded sputum specimens, Indian J. Med. Res., Vol. 100, 1994, pp. 167-171.
4. V. Sritharan, RH. Jr. Barker, A simple method for diagnosing M. Tuberculosis infection in clinical samples using PCR, Mol Cell Probes, Vol. 5, 1991, pp. 385-395.
5. P. V. Baptista, G. Doria, D. Henriques, E. Pereira, R. Franco, Colorimetric detection of eukaryotic gene expression with DNA-derivatized gold nanoparticles, Journal of Biotechnology, Vol. 119, 2005, pp. 111-117.
6. P. V. Baptista, M. Koziol-Montewka, J. Paluch-Oles, G. Doria, R. Franco, Goldnanoparticle-probe-based assay for rapid and direct detection of Mycobacterium tuberculosis DNA in clinical samples, Clinical Chemistry, Vol. 52, 2006, pp. 1433-1434.
7. T. Notomi, H. Okayama, H. Masubuchi, et al. Loopmediated isothermal amplification of DNA. Nucleic Acids Res, Vol. 28, Issue 12, 2000, pp. e63.
8. Y. Mori, T. Hirano, T. Notomi. Sequence specific visual detection of LAMP reactions by addition of cationic polymers. BMC Biotechnol, Vol. 6, 2006, 3.
9. T. Iwamoto, T. Sonobe, K. Hayashi, Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples, J. Clin. Microbiol., Vol. 41, 2003, pp. 2616-2622.
10. C. C. Boehme, P. Nabeta, G. Henostroza, et al., Operational feasibility of using loop-mediated isothermal amplification for diagnosis of pulmonary tuberculosis in microscopy centers of developing countries, J. Clin. Microbiol, Vol. 45, 2007, pp. 1936-1940.
11. B. D. Pandey, A. Poudel, T. Yoda, et al., Development of an in-house loop-mediated isothermal amplification (LAMP) assay for detection of Mycobacterium tuberculosis and evaluation in sputum samples of Nepalese patients, J. Med. Microbiol., Vol. 57, 2008, pp. 439-443.
12. E. Aryan, M. Makvandi, A. Farajzadeh, et al., A novel and more sensitive loop-mediated isothermal amplification assay targeting IS6110 for detection of Mycobacterium tuberculosis complex, Microbiol. Research, Vol. 165, 2010, pp. 211-220.
13. M. F. Lee, Y. H. Chen, C. F. Peng, Evaluation of reverse transcription loop-mediated isothermal amplification in conjunction with ELISAhybridization assay for molecular detection of Mycobacterium tuberculosis, J. Microbiol. Methods, Vol. 76, 2009, 174-180.
14. R. Y. Zhu, K. X. Zhang, M. Q. Zhao, et al., Use of visual loop-mediated isotheral amplification of rimM sequence for rapid detection of Mycobacterium tuberculosis and Mycobacterium bovis, J. Microbio. l Methods, Vol. 78, 2009, pp. 339-343.
15. T. Kaewphinit, S. Santiwatanakul, C. Promptmas, K. Chansiri, Detection of non-amplified Mycobacterium tuberculosis genomic DNA using piezoelectric DNAbased biosensors, Sensors, Vol. 10, 2010, pp. 1847-1858.
16. T. Kaewphinit, S. Santiwatanakul, C. Promptmas, K. Chansiri, Development of piezoelectric DNA-based biosensor for direct detection of Mycobacterium tuberculosis in Clinical Specimens, Sensors and Transducers, Vol. 113, Issue 2, February 2010, pp. 115-126.
17. C. A. Mirkin, R. L. Letsinger, R. C. Mucic, J. J. Storhoff, A DNA-based method for rationally assembling nanoparticles into macroscopic materials, Nature, Vol. 382, 1996, pp. 607-609.