Factors affecting occurrence and bloom formation of the nuisance flagellate Gonyostomum semen in boreal lakes

Harmful Algae

Volumn 27, Issue , 2013, Pages 60-67

  Trigal, Cristina ^a   Hallstan, Simon ^a   Johansson, Karin S L ^a   Johnson, Richard K ^a  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

Author keywords

Brownification; Climate warming; Freshwater ecosystems; Harmful algal blooms; Phytoplankton; Raphidophyceae

Indexed keywords

ALGAE; GONYOSTOMUM SEMEN; MASTIGOPHORA (FLAGELLATES); RAPHIDOPHYCEAE;

EID: 84880255588     PISSN: 15689883     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.hal.2013.04.008     Document Type: Article

References (46)

1. Angeler D.G., Trigal C., Drakare S., Johnson R.K., Goedkoop W. Identifying resilience mechanisms to recurrent ecosystem perturbations. Oecologia 2010, 164(1):231-241.
2. Breiman L. Random forests. Machine Learning 2001, 45(1):5-32.
3. Breiman L., Friedman J.H., Olshen R.A., Stone C.J. Classification and Regression Trees 1984, Wadsworth & Brooks/Cole Advanced Books & Software, Monterey, CA.
4. Brett M.T. Zooplankton communities and acidification processes (a review). Water Air and Soil Pollution 1989, 44(3/4):387-414.
5. Cronberg G., Lindmark G., Bjork S. Mass development of the flagellate Gonyostomum semen (Raphidophyta) in Swedish forest lakes - an effect of acidification. Hydrobiologia 1988, 161(1):217-236.
6. Cutler D.R., Edwards T.C., Beard K.H., Cutler A., Hess K.T., Gibson J., Lawer J.J. Random forest for classification in ecology. Ecology 2007, 88(11):2783-2792.
7. Eloranta P., Raike A. Light as a factor affecting the vertical distribution of Gonyostomum semen (Ehr.) Diesing (Raphidophyceae) in lakes. Aqua Fennica 1995, 25(0):15-22.
8. Fängström I., Willén E. Clustering and canonical correspondence analysis of phytoplankton and environmental variables in Swedish lakes. Vegetatio 1987, 71(2):87-95.
9. Fielding A.H., Bell J.F. A review of methods for the assessment of prediction errors in conservation presence/absence models. Environmental Conservation 1997, 24(1):38-49.
10. Figueroa R.I., Rengefors K. Life cycle and sexuality of the freshwater raphidophyte Gonyostomum semen (Raphidophyceae). Journal of Phycology 2006, 42(4):859-871.
11. Findlay D.L., Paterson M., Hendzel L.L., Kling H. Factors influencing Gonyostomum semen blooms in a small boreal reservoir lake. Hydrobiologia 2005, 533(1-3):243-252.
12. Freeman E.A., Moisen G. PresenceAbsence: an R package for presence absence analysis. Journal of Statistical Software 2008, 23(11):1-31.
13. Hansson L.A. Algal recruitment from lake sediments in relation to grazing, sinking, and dominance patterns in the phytoplankton community. Limnology and Oceanography 1996, 41(6):1312-1323.
14. Hansson L.A. Synergistic effects of food chain dynamics and induced behavioral responses in aquatic ecosystems. Ecology 2000, 81(3):842-851.
15. Hehmann A., Krienitz L., Koschel R. Long-term phytoplankton changes in an artificially divided, top-down manipulated humic lake. Hydrobiologia 2001, 448(1-3):83-96.
16. Hothorn T., Hornik K., Zeileis A. Unbiased recursive partitioning: a conditional inference framework. Journal of Computational and Graphical Statistics 2006, 15(3):651-674.
17. Illies J. Limnofauna Europaea 1978, Stuttgart, Germany.
18. IPCC Climate Change 2007: The Physical Science Basis 2007, Contribution of Working Group I (WGI), Cambridge, UK.
19. Johansson K.S.L., Trigal C., Vrede T., Johnson R.K. Community structure in boreal lakes with recurrent blooms of the nuisance flagellate Gonyostomum semen. Aquatic Sciences 2013, (in press).
20. Kritzberg E.S., Ekström S.M. Increasing iron concentrations in surface waters - a factor behind brownification?. Biogeosciences 2012, 9(4):1465-1478.
21. Lättman H., Milberg P., Palmer M.W., Mattsson J.-E. Changes in the distributions of epiphytic lichens in southern Sweden using a new statistical method. Nordic Journal of Botany 2009, 27(5):413-418.
22. Lebret K., Fernandez M.F., Hagman C.H.C., Rengefors K., Hansson L.A. Grazing resistance allows bloom formation and may explain invasion success of Gonyostomum semen. Limnology and Oceanography 2012, 57(3):727-734.
23. Lepistö L., Antikainen S., Kivinen J. The occurrence of Gonyostomum semen (Ehr) Diesing in Finnish lakes. Hydrobiologia 1994, 273(1):1-8.
24. Lewis W.M., Wurtsbaugh W.A. Control of lacustrine phytoplankton by nutrients: erosion of the phosphorus paradigm. International Review of Hydrobiology 2008, 93(4/5):446-465.
25. Litchman E. Invisible invaders: non-pathogenic invasive microbes in aquatic and terrestrial ecosystems. Ecology Letters 2010, 13(12):1560-1572.
26. Liu C.R., Berry P.M., Dawson T.P., Pearson R.G. Selecting thresholds of occurrence in the prediction of species distributions. Ecography 2005, 28(3):385-393.
27. NCAR - Research Application Program Verification: Forecast Verification Utilities, R package version 1.31 2010, http://cran.r-project.org/package=verification, 1.31 ed.
28. Nixdorf B., Fyson A., Krumbeck H. Review: plant life in extremely acidic waters. Environmental and Experimental Botany 2001, 46(3):203-211.
29. Noges P., Adrian R., Anneville O., Arvola L., Blenckner T., George G., Jankowski T., Jarvinen M., Maberly S., Padisak J., Straile D., Teubner K., Weyhenmeyer G. The impact of variations in the climate on seasonal dynamics of phytoplankton. Impact of Climate Change on Europe 2010, vol. 4:253-274. Springer, Aquatic Ecology series.
30. Olrik K.P., Blomqvist P., Brettum P., Cronberg G., Eloranta P., Blomqvist P., Brettum P., Cronberg G., Eloranta P. Methods for Quantitative Assessment of Phytoplankton in Freshwaters Part I 1989, Swedish Environmental Protection Agency, Stockholm.
31. Paerl H.W., Hall N.S., Calandrino E.S. Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climatic-induced change. Science of the Total Environment 2011, 409(10):1739-1745.
32. Peltomaa E., Ojala A. Size-related photosynthesis of algae in a strongly stratified humic lake. Journal of Plankton Research 2010, 32(3):341-355.
33. Pithart D., Pechar L., Mattsson G. Summer blooms of raphidophyte Gonyostomum semen and its diurnal vertical migration in a floodplain pool. Archiv Fur Hydrobiologie 1997, 119:119-133.
34. R Development Core Team R: A Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria. http://www.r-project.org/.
35. Rengefors K., Palsson C., Hansson L.A., Heiberg L. Cell lysis of competitors and osmotrophy enhance growth of the bloom-forming alga Gonyostomum semen. Aquatic Microbial Ecology 2008, 51(1):87-96.
36. Rengefors K., Weyhenmeyer G.A., Bloch I. Temperature as a driver for the expansion of the microalga Gonyostomum semen in Swedish lakes. Harmful Algae 2012, 18:65-73.
37. Salonen K., Rosenberg M. Advantages from diel vertical migration can explain the dominance of Gonyostomum semen (Raphidophyceae) in a small, steeply-stratified humic lake. Journal of Plankton Research 2000, 22(10):1841-1853.
38. Smayda T.J. What is a bloom? A commentary. Limnology and Oceanography 1997, 42(2):1132-1136.
39. Sörensen I. Gonyostomum semen (Ehrenb.) Diesing. En vattenorganism av teoretiskt och praktiskt intresse. Svensk Faunistisk Revy 1954, 2:1-6.
40. Ståhl-Delbanco A., Hansson L.-A. Effects of bioturbation on recruitment of algal cells from the "seed bank" of lake sediments. Limnology and Oceanography 2002, 47(6):1836-1843.
41. Strobl C., Boulesteix A.L., Kneib T., Augustin T., Zeileis A. Conditional variable importance for random forests. BMC Bioinformatics 2008, 9:307.
42. Strobl C., Boulesteix A.L., Zeileis A., Hothorn T. Bias in random forest variable importance measures: Illustrations, sources and a solution. BMC Bioinformatics 2007, 8:25.
43. Throndsen J. Preservation and storage. Phytoplankton Manual 1978, 70-71. UNESCO, Paris. A. Sournia (Ed.).
44. Wilander A., Johnson R.K., Goedkoop W. Riksinventering 2000. En synoptisk studie av vattenkemi och bottenfauna i svenska sjöar och vattendrag 2003, Department of Environmental Assessment, Uppsala, (in Swedish).
45. Willen E. Dominance patterns of planktonic algae in Swedish forest lakes. Hydrobiologia 2003, 502(1-3):315-324.
46. Zaret T.M., Suffern J.S. Vertical migration in zooplankton as a predator avoidance mechanism. Limnology and Oceanography 1976, 21(6):804-813.