Bioassay of chemically treated subbituminous coal derivatives using Pseudomonas putida F1

International Journal of Coal Geology

Volumn 115, Issue , 2013, Pages 97-105

  Huang, Zaixing ^a   Urynowicz, Michael A ^a,b   Colberg, Patricia J S ^a  

^a UNIVERSITY OF WYOMING   (United States)

^b UNIVERSITY OF WYOMING   (United States)

Author keywords

Biometer assay; Chemical agents; Coalbed natural gas; Pretreatment; Subbituminous coal

Indexed keywords

BIOLOGICAL POTENTIAL; CHEMICAL AGENT; COAL BED NATURAL GAS; DISSOLVED ORGANIC CARBON; PRE-TREATMENT; PSEUDOMONAS PUTIDA F1; RELATIVE BIOAVAILABILITY; SUBBITUMINOUS COAL;

BACTERIA; BIOCHEMISTRY; CARBON; CARBON DIOXIDE; COAL; COAL DEPOSITS; METHANE; NATURAL GAS; NITRIC ACID; SODIUM; SUBSTRATES;

BIOASSAY;

BACTERIUM; BIOASSAY; BIOAVAILABILITY; CONCENTRATION (COMPOSITION); DISSOLVED ORGANIC CARBON; NATURAL GAS; NITRATE; NITRIC ACID; SODIUM; SOLUBILITY; SUBBITUMINOUS COAL;

PSEUDOMONAS PUTIDA;

EID: 84880043026     PISSN: 01665162     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.coal.2013.01.012     Document Type: Article

References (66)

1. Abuhamed T., Bayraktar E., Mehmetoǧlu T., Mehmetoǧlu Ü. Kinetics model for growth of Pseudomonas putida F1 during benzene, toluene and phenol biodegradation. Process Biochemistry 2004, 39:983-988.
2. Allan J., Larter S.R. Evidence for long-chain aliphatic structures in sporinite kerogen by alakaline potassium permanganate oxidation. American Chemical Society, Division of Fuel Chemistry 1981, 26:26-30.
3. Alvarez R., Clemente C., Gomez-Limon D. The influence of nitric acid oxidation of low rank coal and its impact on coal structure. Fuel 2003, 82:2007-2015.
4. Amy G., Drewes J. Soil aquifer pretreatment (SAT) as a natural and sustainable wastewater reclamation/reuse technology: fate of wastewater effluent organic matter (EfOM) and trace organic compounds. Environmental Monitoring and Assessment 2007, 129:19-26.
5. Arndt D. Manganese Compounds as Oxidizing Agents in Organic Chemistry 1975, Open Court Publishing Company, La Salle, IL, USA. 4th ed.
6. Balba M., Al-Awadhi N., Al-Daher R. Bioremediation of oil-contaminated soil: microbiological methods for feasibility assessment and field evaluation. Journal of Microbiological Methods 1998, 32:155-164.
7. Barbusinski K. Fenton reaction - controversy concerning the chemistry. Ecological Chemistry and Engineering 2009, 16(3):347-358.
8. Bartha R., Pramer D. Features of flask and method for measurement of the persistence and biological effects of pesticides in soil. Soil Science 1965, 100:68-70.
9. Beckmann S., Krüger M., Engelen B., Gorbushina A.A., Cypionka H. Role of bacteria, archaea and fungi involved in methane release in abandoned coal mines. Geomicrobiology Journal 2011, 28:347-358.
10. Beckmann S., Lueders T., Krüger M., von Netzer F., Engelen B., Cypionka H. Acetogens and acetoclastic methanosarcinales govern methane formation in abandoned coal mines. Applied and Environmental Microbiology 2011, 77:3749-3756.
11. Bordel S., Munoz R., Diaz L.F., Villaverde S. New insights on toluene biodegradation by Pseudomonas putida F1: influence of pollutant concentration and excreted metabolites. Applied Microbial and Cell Physiology 2007, 74:857-866.
12. Burke S., Jarvie A.W.P., Gaines A.F. Phase transfer catalyzed permanganate oxidation of three British bituminous coals. Fuel 1990, 69:1370-1376.
13. Dash S., Patel S., Mishra B.K. Oxidation by permanganate: synthetic and mechanistic aspects. Tetrahedron 2009, 65:707-739.
14. Deno N.C., Curry K.W., Jones A.D., Keegan K.R., Rakitsky W.G., Richter C.A., Minard R.D. Linear alkane chains in coals. Fuel 1981, 60:210-212.
15. Diaz L.P., Munoz R., Bordel S., Villaverde S. Toluene biodegradation by Pseudomonas putida F1: targeting culture stability in long-term operation. Biodegradation 2008, 19:197-208.
16. Djuricic M., Murphy R.C., Vitorovic D., Biemann K. Organic acids obtained by alkaline permanganate oxidation of kerogen from the Green River (Colorado) shale. Geochimica et Cosmochimica Acta 1971, 35(12):1201-1207.
17. Duetz W.A., de Jong C., Wlliams P.A., van Andel J.G. Competition in chemostat culture between Pseudomonas strains that use different pathways for the degradation of toluene. Applied and Environmental Microbiology 1994, 60(8):2858-2863.
18. Energy Information Administration (EIA) Annual Energy Outlook (http://www.eia.gov/oiaf/aeo/aeoref_tab.html).
19. Ghosh T.K., Prelas M.A. Energy resources and systems. Fundamentals and Non-Renewable Resources 2009, vol. 1. Springer, New York.
20. Gibson D.T., Koch J.R., Kallio R.E. Oxidative degradation of aromatic hydrocarbons by microorganisms. I. Enzymic formation of catechol from benzene. Biochemistry 1968, 7:2653-2662.
21. Gibson D.T., Hensley M., Yoshioka H., Mabry T.J. Oxidative degradation of aromatic hydrocarbons by microorganisms. III. Formation of (+)-cis-2,3-dihydroxy-1-methyl-4,6-cyclohexadiene from toluene by Pseudomonas putida. Biochemistry 1970, 9:1626-1630.
22. Harris S.H., Smith R.L., Barker C.E. Microbial and chemical factors influencing methane production in laboratory incubations of low-rank subsurface coals. International Journal of Coal Geology 2008, 76:46-51.
23. Hayatsu R., Winans R.E., Scott R.G., McBeth R.L. Is kerogen-like material present in coal? 1. Buffer-controlled permanganate oxidation of coal. Fuel 1981, 60:158-161.
24. Hendricks D. Water Pretreatment Unit Processes: Physical and Chemical 2006, CRC Press, Boca Raton, FL.
25. Hofrichter M., Fakoussa R.M. Microbial degradation and modification of coal. Chapter 14 in biopolymers. Lignin, Humic Substances and Coal 2001, vol. 1. Verlag GmbH & Co. KGaA, Weinheim, Germany. M. Hofrichter, A. Steinbüchel (Eds.).
26. Hofrichter M., Fritsche W. Depolymerization of low-rank coal by extracellular fungal enzyme systems. Applied Microbiology and Biotechnology 1996, 46:220-225.
27. Ike I.S., Udeh B.C., Aneke L.E., Oyoh K.B. Production of organic (carboxylic) acids from coals through liquid-phase oxidation of coals: new route for utilizing low-rank coals. Journal of Engineering and Science 2011, 6:109-113.
28. International Energy Agency (IEA) The Journal of the International Energy Agency 2011, (1). (http://www.iea.org/media/ieajournal/ieaEnergy_Issue1.pdf).
29. Jaffrennou C., Stephan L., Giamarchi P., Cabon J., Burel-Deschamps L., Bautin F. Direct fluorescence monitoring of coal organic matter released in seawater. Journal of Fluorescence 2007, 17:564-572.
30. Jones E.J.P., Voytek M.A., Warwick P.D., Corum M.D., Cohn A., Bunnell J.E., Clark A.C., Orem W.H. Bioassay for estimating the biogenic methane-generating potential of coal samples. International Journal of Coal Geology 2008, 76:138-150.
31. Jones E.J.P., Voytek M.A., Corum M.D., Orem W.H. Stimulation of methane generation from nonproductive coal by addition of nutrients or a microbial consortium. Applied and Environmental Microbiology 2010, 76:7013-7022.
32. Juan R., Ruiz C., Andres J., Estevez M. Production of humic acids from lignites and subbituminous coals by alkaline-air oxidation. Fuel 1990, 69:161-165.
33. Karaca H., Önal Y. Demineralization of lignites by single and successive pretreatment. Fuel 2003, 82:1517-1522.
34. Krüger M., Beckmann S., Engelen B., Thielemann T., Cramer B., Schippers A., Cypionka H. Microbial methane formation from hard coal and timber in an abandoned coal mine. Geomicrobiology Journal 2008, 25:315-321.
35. Levine D.G., Schlosberg R.H., Silbernagel B.G. Understanding the chemistry and physics of coal structure (a review). Proceedings of the National Academy of Sciences 1982, 79(10):3365-3370.
36. Mae K., Maki T., Araki J., Miura K. Extraction of low-rank coals oxidized with hydrogen peroxide in conventionally used solvents at room temperature. Energy & Fuels 1997, 11:825-831.
37. Mariano A.P., Tomasella R.C., Oliveria L.M., Contiero J., Angelis D.F. Biodegradability of diesel and biodiesel blends. African Journal of Biotechnology 2008, 7:1323-1328.
38. McKnight D.M., Boyer E.W., Westerhoff P.K., Doran P.T., Kulbe T., Andersen T. Spectrofluorometric characterization of dissolved organic matter for indication of precursor organic material and aromaticity. Limnology and Oceanography 2001, 46:38-48.
39. Miura K. Mild conversion of coal for producing valuable chemicals. Fuel Processing Technology 2000, 62:119-135.
40. Miura K., Mae K., Okutsu H., Mizutani N. New oxidative degradation method for producing fatty acids in high yields and high selectivity from low-rank coals. Energy & Fuels 1996, 10:1196-1201.
41. Moliner R., Ruiz C., Uliaque C., Gavilán J. Action of nitric acid on lignites; mathematical models: 1. Humic substances and acidity of nitrolignites. Fuel 1983, 62:1369-1371.
42. Mukherjee S., Borthakur P.C. Effect of leaching high sulfur subbituminous coal by potassium hydroxide and acid on removal of mineral matter and sulfur. Fuel 2003, 82:783-788.
43. Nishiumi H., Ogasawara H., Ago K. Effect of NaOH on the solubility of fluorocarbon in alcohol-NaOH systems. Fluid Phase Equilibria 2010, 29:159-165.
44. Novak J., Kozler J., Janos P., Cezikova J., Tokarova V., Madronova L. Humic acids from coals of the North-Bohemian coal field: I. Preparation and characterization. Reactive and Functional Polymers 2001, 47:101-109.
45. Orem W.H., Voytek M.A., Jones E.J., Lerch H.E., Bates A.L., Corum M.D., Warwick P.D., Clark A.C. Organic intermediates in the anaerobic biodegradation of coal to methane under laboratory conditions. Organic Geochemistry 2010, 41:997-1000.
46. Palmer S.R., Hippo E.J., Dorai X.A. Chemical coal cleaning using selective oxidation. Fuel 1994, 73:161-169.
47. Pan X., Xie D., Gilkes N., Gregg D.J., Saddler J.N. Strategies to enhance the enzymatic hydrolysis of pretreated softwood with high residual lignin content. Applied Biochemistry and Biotechnology 2005, 124:1069-1079.
48. Panow A., FitzGerald J.M.P., Mainwaring D.E. Mechanisms of biologically-mediated methane evolution from black coal. Fuel Processing Technology 1997, 52:115-125.
49. Papendick S.L., Downs K.R., Vo K.D., Hamilton S.K., Dawson G.K.W., Golding S.D., Gilcrease P.C. Biogenic methane potential for Surat Basin, Queensland coal seams. International Journal of Coal Geology 2011, 88:123-134.
50. Pignatello J.J., Oliveros E., MacKay A. Advanced oxidation processes for organic contaminant destruction based on the Fenton reaction and related chemistry. Critical Reviews in Environmental Science and Technology 2006, 36:1-84.
51. Pritchard P.H., Mueller J.G., Rogers J.C., Kremer F.V., Glaser J.A. Oil spill bioremediation: experiences, lessons and results from the Exxon Valdez oil spill in Alaska. Biodegradation 1992, 3:315-335.
52. Rodriguez R.A., Jul C.C., Gomez-Limon D. The influence of process parameters on coal desulfurization by nitric leaching. Fuel 1996, 75:606-612.
53. Rodriguez R.A., Jul C.C., Gomez-Limon D. Evolution of the organic sulfur and other components during nitric acid leaching of Mequinenza coal. Fuel 1997, 76:1445-1450.
54. Sakanishi K., Deguchi T., Simazaki K. Characterization and elution behaviors of organically associated minerals in coals during acid pretreatment and solvent extraction. Fuel 2002, 81:1471-1475.
55. Sharma D.K., Gihar S. Chemical cleaning of low grade coals through alkali-acid leaching employing mild conditions under ambient pressure. Fuel 1991, 70:663-665.
56. Smith K.L., Smoot L.D., Fletcher T.H., Pugmire R.J. The Structure and Reaction Processes of Coal 1994, Plenum Press, New York.
57. Strapoć D., Picardal F.W., Turich C., Schaperdoth I., Macalady J.L., Lipp J.S., Lin Y.-S., Ertefai T.F., Schubotz F., Hinrichs K.-U., Mastalerz M., Schimmelmann A. Methane-producing microbial community in a coal bed of the Illinois Basin. Applied and Environmental Microbiology 2008, 74:2424-2432.
58. Sun R., Lawther J.M., Banks W.B. Influence of alkaline pre-pretreatments on the cell wall components of wheat straw. Industrial Crops and Products 1995, 4:127-145.
59. Taherzadeh M., Karimi K. Acid-based hydrolysis processes for ethanol from lignocellulosic materials: a review. Bioresources 2007, 2:472-499.
60. Tao M., Shi B., Li J., Wang W., Li X., Gao B. Secondary biological coalbed gas in the Xinji area, Anhui province, China: evidence from the geochemical features and secondary changes. International Journal of Coal Geology 2007, 71:358-370.
61. Thielemann T., Cramer B., Schippers A. Coalbed methane in the Ruhr Basin, Germany: a renewable energy resource?. Organic Geochemistry 2004, 35:1537-1549.
62. Ulrich G., Bower S. Active methanogenesis and acetate utilization in Powder River Basin coals, United States. International Journal of Coal Geology 2008, 76:25-33.
63. Volkwein J.C., Schoeneman A.L., Clausen E.G., Gaddy J.L., Johnson E.R., Basu R., Ju N., Klasson K.T. Biological production of methane from bituminous coal. Fuel Processing Technology 1994, 40:339-345.
64. Yang R.T., Das S.K., Tsai B.M.C. Coal demineralization using sodium hydroxide and acid solutions. Fuel 1985, 64:735-742.
65. Zepp R.G., Faust B.C., Hoigne J. Hydroxyl radical formation in aqueous reactions (pH 3-8) of iron (II) with hydrogen peroxide: the photo-Fenton reaction. Environmental Science and Technology 1992, 26:313-319.
66. Zylstra G.J., Gibson D.T. Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coli. Journal of Biological Chemistry 1989, 264:14940-14946.