메뉴 건너뛰기




Volumn 82, Issue , 2013, Pages 208-225

The nuisance of nuisance regression: Spectral misspecification in a common approach to resting-state fMRI preprocessing reintroduces noise and obscures functional connectivity

Author keywords

Artifacts; Bandpass filtering; Nuisance regression; Preprocessing; Resting state fMRI

Indexed keywords

ADOLESCENT; ADULT; ARTICLE; ARTIFACT; BOLD SIGNAL; BRAIN REGION; CHILD; DIGITAL FILTERING; FUNCTIONAL MAGNETIC RESONANCE IMAGING; FUNCTIONAL NEUROIMAGING; HEAD MOVEMENT; HUMAN; IMAGE PROCESSING; NERVE CELL NETWORK; NORMAL HUMAN; PRIORITY JOURNAL; RESTING STATE NETWORK; SCHOOL CHILD;

EID: 84879724953     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2013.05.116     Document Type: Article
Times cited : (458)

References (53)
  • 1
    • 54049133744 scopus 로고    scopus 로고
    • Mixed-effects modeling with crossed random effects for subjects and items
    • Baayen R.H., Davidson D.J., Bates D.M. Mixed-effects modeling with crossed random effects for subjects and items. J. Mem. Lang. 2008, 59:390-412.
    • (2008) J. Mem. Lang. , vol.59 , pp. 390-412
    • Baayen, R.H.1    Davidson, D.J.2    Bates, D.M.3
  • 3
    • 34447551672 scopus 로고    scopus 로고
    • A component based noise correction method (CompCor) for BOLD and perfusion based fMRI
    • Behzadi Y., Restom K., Liau J., Liu T.T. A component based noise correction method (CompCor) for BOLD and perfusion based fMRI. NeuroImage 2007, 37:90-101.
    • (2007) NeuroImage , vol.37 , pp. 90-101
    • Behzadi, Y.1    Restom, K.2    Liau, J.3    Liu, T.T.4
  • 4
    • 33746852686 scopus 로고    scopus 로고
    • Separating respiratory-variation-related fluctuations from neuronal-activity-related fluctuations in fMRI
    • Birn R.M., Diamond J.B., Smith M.A., Bandettini P.A. Separating respiratory-variation-related fluctuations from neuronal-activity-related fluctuations in fMRI. NeuroImage 2006, 31:1536-1548.
    • (2006) NeuroImage , vol.31 , pp. 1536-1548
    • Birn, R.M.1    Diamond, J.B.2    Smith, M.A.3    Bandettini, P.A.4
  • 5
    • 40649083494 scopus 로고    scopus 로고
    • The respiration response function: the temporal dynamics of fMRI signal fluctuations related to changes in respiration
    • Birn R.M., Smith M.A., Jones T.B., Bandettini P.A. The respiration response function: the temporal dynamics of fMRI signal fluctuations related to changes in respiration. NeuroImage 2008, 40:644-654.
    • (2008) NeuroImage , vol.40 , pp. 644-654
    • Birn, R.M.1    Smith, M.A.2    Jones, T.B.3    Bandettini, P.A.4
  • 7
    • 80755188017 scopus 로고    scopus 로고
    • The organization of the human cerebellum estimated by intrinsic functional connectivity
    • Buckner R.L., Krienen F.M., Castellanos A., Diaz J.C., Yeo B.T.T. The organization of the human cerebellum estimated by intrinsic functional connectivity. J. Neurophysiol. 2011, 106:2322-2345.
    • (2011) J. Neurophysiol. , vol.106 , pp. 2322-2345
    • Buckner, R.L.1    Krienen, F.M.2    Castellanos, A.3    Diaz, J.C.4    Yeo, B.T.T.5
  • 8
    • 65549097795 scopus 로고    scopus 로고
    • A review of group ICA for fMRI data and ICA for joint inference of imaging, genetic, and ERP data
    • Calhoun V.D., Liu J., Adali T. A review of group ICA for fMRI data and ICA for joint inference of imaging, genetic, and ERP data. NeuroImage 2009, 45:S163-S172.
    • (2009) NeuroImage , vol.45
    • Calhoun, V.D.1    Liu, J.2    Adali, T.3
  • 9
    • 84864409471 scopus 로고    scopus 로고
    • The secret lives of experiments: methods reporting in the fMRI literature
    • Carp J. The secret lives of experiments: methods reporting in the fMRI literature. NeuroImage 2012, 63:289-300.
    • (2012) NeuroImage , vol.63 , pp. 289-300
    • Carp, J.1
  • 10
    • 84877072447 scopus 로고    scopus 로고
    • Optimizing the order of operations for movement scrubbing: comment on Power et al
    • Carp J. Optimizing the order of operations for movement scrubbing: comment on Power et al. NeuroImage 2013, 76:436-438.
    • (2013) NeuroImage , vol.76 , pp. 436-438
    • Carp, J.1
  • 11
    • 57649221314 scopus 로고    scopus 로고
    • Influence of heart rate on the BOLD signal: the cardiac response function
    • Chang C., Cunningham J.P., Glover G.H. Influence of heart rate on the BOLD signal: the cardiac response function. NeuroImage 2009, 44:857-869.
    • (2009) NeuroImage , vol.44 , pp. 857-869
    • Chang, C.1    Cunningham, J.P.2    Glover, G.H.3
  • 13
    • 58849124142 scopus 로고    scopus 로고
    • Control networks in paediatric Tourette syndrome show immature and anomalous patterns of functional connectivity
    • Church J.A., Fair D.A., Dosenbach N.U.F., Cohen A.L., Miezin F.M., Petersen S.E., Schlaggar B.L. Control networks in paediatric Tourette syndrome show immature and anomalous patterns of functional connectivity. Brain 2009, 132:225-238.
    • (2009) Brain , vol.132 , pp. 225-238
    • Church, J.A.1    Fair, D.A.2    Dosenbach, N.U.F.3    Cohen, A.L.4    Miezin, F.M.5    Petersen, S.E.6    Schlaggar, B.L.7
  • 15
    • 80054048963 scopus 로고    scopus 로고
    • Advances and pitfalls in the analysis and interpretation of resting-state FMRI data
    • Cole D.M., Smith S.M., Beckmann C.F. Advances and pitfalls in the analysis and interpretation of resting-state FMRI data. Front. Syst. Neurosci. 2010, 4:8.
    • (2010) Front. Syst. Neurosci. , vol.4 , pp. 8
    • Cole, D.M.1    Smith, S.M.2    Beckmann, C.F.3
  • 16
    • 79958808956 scopus 로고    scopus 로고
    • Variable global dysconnectivity and individual differences in schizophrenia
    • Cole M.W., Anticevic A., Repovs G., Barch D. Variable global dysconnectivity and individual differences in schizophrenia. Biol. Psychiatry 2011, 70:43-50.
    • (2011) Biol. Psychiatry , vol.70 , pp. 43-50
    • Cole, M.W.1    Anticevic, A.2    Repovs, G.3    Barch, D.4
  • 17
    • 0030175198 scopus 로고    scopus 로고
    • AFNI: software for analysis and visualization of functional magnetic resonance neuroimages
    • Cox R.W. AFNI: software for analysis and visualization of functional magnetic resonance neuroimages. Comput. Biomed. Res. 1996, 29:162-173.
    • (1996) Comput. Biomed. Res. , vol.29 , pp. 162-173
    • Cox, R.W.1
  • 18
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team ,R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team R: A Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria.
    • (2011) R: A Language and Environment for Statistical Computing
  • 20
    • 0002714541 scopus 로고
    • Band spectrum regression
    • Engle R.F. Band spectrum regression. Int. Econ. Rev. 1974, 15:1-11.
    • (1974) Int. Econ. Rev. , vol.15 , pp. 1-11
    • Engle, R.F.1
  • 25
    • 0033934775 scopus 로고    scopus 로고
    • Image-based method for retrospective correction of physiological motion effects in fMRI: RETROICOR
    • Glover G.H., Li T.Q., Ress D. Image-based method for retrospective correction of physiological motion effects in fMRI: RETROICOR. Magn. Reson. Med. 2000, 44:162-167.
    • (2000) Magn. Reson. Med. , vol.44 , pp. 162-167
    • Glover, G.H.1    Li, T.Q.2    Ress, D.3
  • 26
    • 57349194220 scopus 로고    scopus 로고
    • Electrophysiological correlates of the brain's intrinsic large-scale functional architecture
    • He B.J., Snyder A.Z., Zempel J.M., Smyth M.D., Raichle M.E. Electrophysiological correlates of the brain's intrinsic large-scale functional architecture. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:16039-16044.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 16039-16044
    • He, B.J.1    Snyder, A.Z.2    Zempel, J.M.3    Smyth, M.D.4    Raichle, M.E.5
  • 27
    • 49849092907 scopus 로고    scopus 로고
    • Simultaneous inference in general parametric models
    • Hothorn T., Bretz F., Westfall P. Simultaneous inference in general parametric models. Biom. J. 2008, 50:346-363.
    • (2008) Biom. J. , vol.50 , pp. 346-363
    • Hothorn, T.1    Bretz, F.2    Westfall, P.3
  • 30
    • 77953809025 scopus 로고    scopus 로고
    • Mapping sources of correlation in resting state FMRI, with artifact detection and removal
    • Jo H.J., Saad Z.S., Simmons W.K., Milbury L.A., Cox R.W. Mapping sources of correlation in resting state FMRI, with artifact detection and removal. NeuroImage 2010, 52:571-582.
    • (2010) NeuroImage , vol.52 , pp. 571-582
    • Jo, H.J.1    Saad, Z.S.2    Simmons, W.K.3    Milbury, L.A.4    Cox, R.W.5
  • 34
    • 84856279015 scopus 로고    scopus 로고
    • The amplitude and timing of the BOLD signal reflects the relationship between local field potential power at different frequencies
    • Magri C., Schridde U., Murayama Y., Panzeri S., Logothetis N.K. The amplitude and timing of the BOLD signal reflects the relationship between local field potential power at different frequencies. J. Neurosci. 2012, 32:1395-1407.
    • (2012) J. Neurosci. , vol.32 , pp. 1395-1407
    • Magri, C.1    Schridde, U.2    Murayama, Y.3    Panzeri, S.4    Logothetis, N.K.5
  • 35
    • 57649158932 scopus 로고    scopus 로고
    • The impact of global signal regression on resting state correlations: are anti-correlated networks introduced?
    • Murphy K., Birn R.M., Handwerker D.A., Jones T.B., Bandettini P.A. The impact of global signal regression on resting state correlations: are anti-correlated networks introduced?. NeuroImage 2009, 44:893-905.
    • (2009) NeuroImage , vol.44 , pp. 893-905
    • Murphy, K.1    Birn, R.M.2    Handwerker, D.A.3    Jones, T.B.4    Bandettini, P.A.5
  • 37
    • 77956315939 scopus 로고    scopus 로고
    • The development of human functional brain networks
    • Power J.D., Fair D.A., Schlaggar B.L., Petersen S.E. The development of human functional brain networks. Neuron 2010, 67:735-748.
    • (2010) Neuron , vol.67 , pp. 735-748
    • Power, J.D.1    Fair, D.A.2    Schlaggar, B.L.3    Petersen, S.E.4
  • 38
    • 84855455705 scopus 로고    scopus 로고
    • Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion
    • Power J.D., Barnes K.A., Snyder A.Z., Schlaggar B.L., Petersen S.E. Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion. NeuroImage 2012, 59:2142-2154.
    • (2012) NeuroImage , vol.59 , pp. 2142-2154
    • Power, J.D.1    Barnes, K.A.2    Snyder, A.Z.3    Schlaggar, B.L.4    Petersen, S.E.5
  • 39
    • 84877028342 scopus 로고    scopus 로고
    • Steps toward optimizing motion artifact removal in functional connectivity MRI; a reply to Carp
    • Power J.D., Barnes K.A., Snyder A.Z., Schlaggar B.L., Petersen S.E. Steps toward optimizing motion artifact removal in functional connectivity MRI; a reply to Carp. NeuroImage 2013, 76:439-441.
    • (2013) NeuroImage , vol.76 , pp. 439-441
    • Power, J.D.1    Barnes, K.A.2    Snyder, A.Z.3    Schlaggar, B.L.4    Petersen, S.E.5
  • 40
    • 84856093663 scopus 로고    scopus 로고
    • Impact of in-scanner head motion on multiple measures of functional connectivity: relevance for studies of neurodevelopment in youth
    • Satterthwaite T.D., Wolf D.H., Loughead J., Ruparel K., Elliott M.A., Hakonarson H., Gur R.C., Gur R.E. Impact of in-scanner head motion on multiple measures of functional connectivity: relevance for studies of neurodevelopment in youth. NeuroImage 2012, 60:623-632.
    • (2012) NeuroImage , vol.60 , pp. 623-632
    • Satterthwaite, T.D.1    Wolf, D.H.2    Loughead, J.3    Ruparel, K.4    Elliott, M.A.5    Hakonarson, H.6    Gur, R.C.7    Gur, R.E.8
  • 43
    • 64149093013 scopus 로고    scopus 로고
    • Neurodegenerative diseases target large-scale human brain networks
    • Seeley W.W., Crawford R.K., Zhou J., Miller B.L., Greicius M.D. Neurodegenerative diseases target large-scale human brain networks. Neuron 2009, 62:42-52.
    • (2009) Neuron , vol.62 , pp. 42-52
    • Seeley, W.W.1    Crawford, R.K.2    Zhou, J.3    Miller, B.L.4    Greicius, M.D.5
  • 46
    • 67650474054 scopus 로고    scopus 로고
    • Changes in the interaction of resting-state neural networks from adolescence to adulthood
    • Stevens M.C., Pearlson G.D., Calhoun V.D. Changes in the interaction of resting-state neural networks from adolescence to adulthood. Hum. Brain Mapp. 2009, 30:2356-2366.
    • (2009) Hum. Brain Mapp. , vol.30 , pp. 2356-2366
    • Stevens, M.C.1    Pearlson, G.D.2    Calhoun, V.D.3
  • 47
    • 68049128346 scopus 로고    scopus 로고
    • Development of large-scale functional brain networks in children
    • Supekar K., Musen M., Menon V. Development of large-scale functional brain networks in children. PLoS Biol. 2009, 7:e1000157.
    • (2009) PLoS Biol. , vol.7
    • Supekar, K.1    Musen, M.2    Menon, V.3
  • 48
    • 74049156284 scopus 로고    scopus 로고
    • Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization
    • Van Dijk K.R.A., Hedden T., Venkataraman A., Evans K.C., Lazar S.W., Buckner R.L. Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization. J. Neurophysiol. 2010, 103:297-321.
    • (2010) J. Neurophysiol. , vol.103 , pp. 297-321
    • Van Dijk, K.R.A.1    Hedden, T.2    Venkataraman, A.3    Evans, K.C.4    Lazar, S.W.5    Buckner, R.L.6
  • 49
    • 81155162516 scopus 로고    scopus 로고
    • The influence of head motion on intrinsic functional connectivity MRI
    • Van Dijk K.R.A., Sabuncu M.R., Buckner R.L. The influence of head motion on intrinsic functional connectivity MRI. NeuroImage 2012, 59:431-438.
    • (2012) NeuroImage , vol.59 , pp. 431-438
    • Van Dijk, K.R.A.1    Sabuncu, M.R.2    Buckner, R.L.3
  • 50
    • 84862993537 scopus 로고    scopus 로고
    • The future of the human connectome
    • Van Essen D.C., Ugurbil K. The future of the human connectome. NeuroImage 2012, 62:1299-1310.
    • (2012) NeuroImage , vol.62 , pp. 1299-1310
    • Van Essen, D.C.1    Ugurbil, K.2
  • 51
    • 67651033257 scopus 로고    scopus 로고
    • Correlations and anticorrelations in resting-state functional connectivity MRI: a quantitative comparison of preprocessing strategies
    • Weissenbacher A., Kasess C., Gerstl F., Lanzenberger R., Moser E., Windischberger C. Correlations and anticorrelations in resting-state functional connectivity MRI: a quantitative comparison of preprocessing strategies. NeuroImage 2009, 47:1408-1416.
    • (2009) NeuroImage , vol.47 , pp. 1408-1416
    • Weissenbacher, A.1    Kasess, C.2    Gerstl, F.3    Lanzenberger, R.4    Moser, E.5    Windischberger, C.6
  • 52
    • 0031482736 scopus 로고    scopus 로고
    • Multiple testing of general contrasts using logical constraints and correlations
    • Westfall P.H. Multiple testing of general contrasts using logical constraints and correlations. J. Am. Stat. Assoc. 1997, 92:299-306.
    • (1997) J. Am. Stat. Assoc. , vol.92 , pp. 299-306
    • Westfall, P.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.