메뉴 건너뛰기




Volumn 4, Issue 10, 2013, Pages 906-913

pavo: An R package for the analysis, visualization and organization of spectral data

Author keywords

Animal communication; Colour; Colourspace; Receptor noise; Reflectance; Sensory ecology; Spectrometry; Visual model

Indexed keywords


EID: 84879545164     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/2041-210X.12069     Document Type: Article
Times cited : (507)

References (48)
  • 1
    • 28044443946 scopus 로고    scopus 로고
    • Quantifying colors
    • (eds K.J. Mcgraw & G.E. Hill). Harvard University Press, Cambridge, MA.
    • Andersson, S. & Prager, M. (2006) Quantifying colors. Bird Coloration Vol. I (eds K.J. Mcgraw & G.E. Hill ), pp. 41-89. Harvard University Press, Cambridge, MA.
    • (2006) Bird Coloration , vol.1 , pp. 41-89
    • Andersson, S.1    Prager, M.2
  • 4
    • 33846224395 scopus 로고    scopus 로고
    • Avian color vision and coloration: multidisciplinary evolutionary biology
    • Bennett, A.T.D. & Théry, M. (2007) Avian color vision and coloration: multidisciplinary evolutionary biology. The American Naturalist, 169(S1), S1-S6.
    • (2007) The American Naturalist , vol.169 , Issue.S1
    • Bennett, A.T.D.1    Théry, M.2
  • 6
    • 78651518941 scopus 로고    scopus 로고
    • How many color metrics do we need? evaluating how different color-scoring procedures explain carotenoid pigment content in avian bare-part and plumage ornaments
    • Butler, M.W., Toomey, M.B. & McGraw, K.J. (2011) How many color metrics do we need? evaluating how different color-scoring procedures explain carotenoid pigment content in avian bare-part and plumage ornaments. Behavioral Ecology and Sociobiology, 65, 401-413.
    • (2011) Behavioral Ecology and Sociobiology , vol.65 , pp. 401-413
    • Butler, M.W.1    Toomey, M.B.2    McGraw, K.J.3
  • 10
    • 84860159920 scopus 로고    scopus 로고
    • Relative contributions of pigments and biophotonic nanostructures to natural color production: a case study in budgerigar (Melopsittacus undulatus) feathers
    • D'Alba, L., Kieffer, L. & Shawkey, M.D. (2012) Relative contributions of pigments and biophotonic nanostructures to natural color production: a case study in budgerigar (Melopsittacus undulatus) feathers. Journal of Experimental Biology, 215, 1272-1277.
    • (2012) Journal of Experimental Biology , vol.215 , pp. 1272-1277
    • D'Alba, L.1    Kieffer, L.2    Shawkey, M.D.3
  • 15
    • 0025658553 scopus 로고
    • On the measurement and classification of colour in studies of animal colour patterns
    • Endler, J.A. (1990) On the measurement and classification of colour in studies of animal colour patterns. Biological Journal of the Linnean Society, 41, 315-352.
    • (1990) Biological Journal of the Linnean Society , vol.41 , pp. 315-352
    • Endler, J.A.1
  • 16
    • 0027488236 scopus 로고
    • The color of light in forests and its implications
    • Endler, J.A. (1993) The color of light in forests and its implications. Ecological Monographs, 63, 1-27.
    • (1993) Ecological Monographs , vol.63 , pp. 1-27
    • Endler, J.A.1
  • 18
    • 84885577133 scopus 로고    scopus 로고
    • Incorporates code from cddlib written by Komei Fukuda rcdd: rcdd (Computational Geometry). URL. R package version 1.1-7.
    • Geyer, C.J., Meeden, G.D. & Incorporates code from cddlib written by Komei Fukuda (2012) rcdd: rcdd (Computational Geometry). URL http://CRAN.Rproject.org/package=rcdd. R package version 1.1-7.
    • (2012)
    • Geyer, C.J.1    Meeden, G.D.2
  • 19
    • 84885582500 scopus 로고    scopus 로고
    • Ioc world bird names (version 3.2). [Online; accessed 12 December 2012].
    • Gill, F. & Donsker, D. (2012) Ioc world bird names (version 3.2). http://www.worldbirdnames.org. [Online; accessed 12 December 2012].
    • (2012)
    • Gill, F.1    Donsker, D.2
  • 20
    • 0025483161 scopus 로고
    • Optimization, constraint, and history in the evolution of eyes
    • Goldsmith, T.H. (1990) Optimization, constraint, and history in the evolution of eyes. Quarterly Review of Biology, 65, 281-322.
    • (1990) Quarterly Review of Biology , vol.65 , pp. 281-322
    • Goldsmith, T.H.1
  • 21
    • 84885582511 scopus 로고    scopus 로고
    • AVICOL, a program to analyse spectrometric data. Last update January 2012.
    • Gomez, D. (2006) AVICOL, a program to analyse spectrometric data. http://sites.google.com/site/avicolprogram/. Last update January 2012.
    • (2006)
    • Gomez, D.1
  • 23
    • 84877970969 scopus 로고    scopus 로고
    • Eggshell conspicuousness is related to paternal brood patch vascularisation in the american thrashers
    • Hanley, D. (2013) Eggshell conspicuousness is related to paternal brood patch vascularisation in the american thrashers. Avian Biology Research, 6, 163-177.
    • (2013) Avian Biology Research , vol.6 , pp. 163-177
    • Hanley, D.1
  • 24
    • 0034894340 scopus 로고    scopus 로고
    • The visual ecology of avian photoreceptors
    • Hart, N.S. (2001) The visual ecology of avian photoreceptors. Progress in Retinal and Eye Research, 20675-703.
    • (2001) Progress in Retinal and Eye Research , vol.20 , pp. 675-703
    • Hart, N.S.1
  • 25
    • 0031859586 scopus 로고    scopus 로고
    • Visual pigments, oil droplets and cone photoreceptor distribution in the european starling (Sturnus vulgaris)
    • Hart, N.S., Partridge, J.C. & Cuthill, I.C. (1998) Visual pigments, oil droplets and cone photoreceptor distribution in the european starling (Sturnus vulgaris). Journal of Experimental Biology, 201, 1433-1446.
    • (1998) Journal of Experimental Biology , vol.201 , pp. 1433-1446
    • Hart, N.S.1    Partridge, J.C.2    Cuthill, I.C.3
  • 29
    • 34547913411 scopus 로고    scopus 로고
    • A comprehensive molecular phylogeny of the starlings (aves: Sturnidae) and mockingbirds (aves: Mimidae): congruent mtdna and nuclear trees for a cosmopolitan avian radiation
    • Lovette, I.J. & Rubenstein, D.R. (2007) A comprehensive molecular phylogeny of the starlings (aves: Sturnidae) and mockingbirds (aves: Mimidae): congruent mtdna and nuclear trees for a cosmopolitan avian radiation. Molecular Phylogenetics and Evolution, 44, 1031-1056.
    • (2007) Molecular Phylogenetics and Evolution , vol.44 , pp. 1031-1056
    • Lovette, I.J.1    Rubenstein, D.R.2
  • 30
    • 84885678623 scopus 로고    scopus 로고
    • Data from: pavo: an R package for the analysis, visualization and organization of spectral data. Dryad Digital Repository. doi: 10.5061/dryad.298b1
    • Maia, R., Eliason, C.M., Bitton, P.-P., Doucet, S.M. & Shawkey, M.D. (2013) Data from: pavo: an R package for the analysis, visualization and organization of spectral data. Dryad Digital Repository. doi: 10.5061/dryad.298b1
    • (2013)
    • Maia, R.1    Eliason, C.M.2    Bitton, P.-P.3    Doucet, S.M.4    Shawkey, M.D.5
  • 31
    • 33847754189 scopus 로고    scopus 로고
    • Analyzing colors
    • (eds K.J. Mcgraw G.E. Hill). Harvard University Press, Cambridge, MA.
    • Montgomerie, R. (2006) Analyzing colors. Bird Coloration Vol. I (eds K.J. Mcgraw & G.E. Hill ), pp. 90-147. Harvard University Press, Cambridge, MA.
    • (2006) Bird Coloration , vol.1 , pp. 90-147
    • Montgomerie, R.1
  • 32
    • 78649702754 scopus 로고    scopus 로고
    • In the eyes of the beholders: female choice and avian predation risk associated with an exaggerated male butterfly color
    • Morehouse, N.I. & Rutowski, R.L. (2010) In the eyes of the beholders: female choice and avian predation risk associated with an exaggerated male butterfly color. The American Naturalist, 176, 768-784.
    • (2010) The American Naturalist , vol.176 , pp. 768-784
    • Morehouse, N.I.1    Rutowski, R.L.2
  • 33
    • 58149180115 scopus 로고    scopus 로고
    • Elevated yolk androgen levels and the expression of multiple sexually selected male characters
    • Muller, W. & Eens, M. (2009) Elevated yolk androgen levels and the expression of multiple sexually selected male characters. Hormones and Behavior, 55, 175-181.
    • (2009) Hormones and Behavior , vol.55 , pp. 175-181
    • Muller, W.1    Eens, M.2
  • 34
    • 1042304216 scopus 로고    scopus 로고
    • Ape: analyses of phylogenetics and evolution in R language
    • Paradis, E., Claude, J. & Strimmer, K. (2004) Ape: analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290.
    • (2004) Bioinformatics , vol.20 , pp. 289-290
    • Paradis, E.1    Claude, J.2    Strimmer, K.3
  • 35
    • 78751683419 scopus 로고    scopus 로고
    • How integument colour reflects its carotenoid content: a stickleback's perspective
    • Pike, T.W., Bjerkeng, B., Blount, J.D., Lindstroem, J. & Metcalfe, N.B. (2011) How integument colour reflects its carotenoid content: a stickleback's perspective. Functional Ecology, 25, 297-304.
    • (2011) Functional Ecology , vol.25 , pp. 297-304
    • Pike, T.W.1    Bjerkeng, B.2    Blount, J.D.3    Lindstroem, J.4    Metcalfe, N.B.5
  • 37
    • 33750555554 scopus 로고    scopus 로고
    • Comparing plumage colour measurements obtained directly from live birds and from collected feathers: the case of the great tit Parus major
    • Quesada, J. & Senar, J.C. (2006) Comparing plumage colour measurements obtained directly from live birds and from collected feathers: the case of the great tit Parus major. Journal of Avian Biology, 37, 609-616.
    • (2006) Journal of Avian Biology , vol.37 , pp. 609-616
    • Quesada, J.1    Senar, J.C.2
  • 38
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria.
    • R Development Core Team (2013) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org/.
    • (2013) R: A Language and Environment for Statistical Computing
  • 39
    • 72049104004 scopus 로고    scopus 로고
    • Reproductive skew and selection on female ornamentation in social species
    • Rubenstein, D.R. & Lovette, I.J. (2009) Reproductive skew and selection on female ornamentation in social species. Nature, 462, 786-789.
    • (2009) Nature , vol.462 , pp. 786-789
    • Rubenstein, D.R.1    Lovette, I.J.2
  • 41
    • 0035054406 scopus 로고    scopus 로고
    • Ocular media transmission of coral reef fish-can coral reef fish see ultraviolet light
    • Siebeck, U. & Marshall, N. (2001) Ocular media transmission of coral reef fish-can coral reef fish see ultraviolet light? Vision Research, 41, 133-149.
    • (2001) Vision Research , vol.41 , pp. 133-149
    • Siebeck, U.1    Marshall, N.2
  • 42
    • 84863893157 scopus 로고    scopus 로고
    • Mimicry and masquerade from the avian visual perspective
    • Stoddard, M.C. (2012) Mimicry and masquerade from the avian visual perspective. Current Zoology, 58, 630-648.
    • (2012) Current Zoology , vol.58 , pp. 630-648
    • Stoddard, M.C.1
  • 43
    • 43949090490 scopus 로고    scopus 로고
    • Evolution of avian plumage color in a tetrahedral color space: a phylogenetic analysis of new world buntings
    • Stoddard, M.C. & Prum, R.O. (2008) Evolution of avian plumage color in a tetrahedral color space: a phylogenetic analysis of new world buntings. The American Naturalist, 171, 755-776.
    • (2008) The American Naturalist , vol.171 , pp. 755-776
    • Stoddard, M.C.1    Prum, R.O.2
  • 44
    • 79955161192 scopus 로고    scopus 로고
    • Avian vision and the evolution of egg color mimicry in the common cuckoo
    • Stoddard, M.C. & Stevens, M. (2011) Avian vision and the evolution of egg color mimicry in the common cuckoo. Evolution, 65, 2004-2013.
    • (2011) Evolution , vol.65 , pp. 2004-2013
    • Stoddard, M.C.1    Stevens, M.2
  • 45
    • 0028981024 scopus 로고
    • Ultra-violet photoreceptors in the animal kingdom: their distribution and function
    • Tovee, M.J. (1995) Ultra-violet photoreceptors in the animal kingdom: their distribution and function. Trends in Ecology & Evolution, 10, 455-460.
    • (1995) Trends in Ecology & Evolution , vol.10 , pp. 455-460
    • Tovee, M.J.1
  • 46
    • 84931749038 scopus 로고    scopus 로고
    • The multidimensionality of the niche reveals functional diversity changes in benthic marine biotas across geological time
    • Villéger, S., Novack-Gottshall, P.M. & Mouillot, D. (2011) The multidimensionality of the niche reveals functional diversity changes in benthic marine biotas across geological time. Ecology Letters, 14, 561-568.
    • (2011) Ecology Letters , vol.14 , pp. 561-568
    • Villéger, S.1    Novack-Gottshall, P.M.2    Mouillot, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.