-
1
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J, Li R, Raes J, et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010;464:59-U70.
-
(2010)
Nature
, vol.464
-
-
Qin, J.1
Li, R.2
Raes, J.3
-
3
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
DOI 10.1016/j.cell.2006.02.017, PII S0092867406001929
-
Ley RE, Peterson DA, Gordon JI. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 2006;124:837-48. (Pubitemid 43261456)
-
(2006)
Cell
, vol.124
, Issue.4
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
4
-
-
52649117166
-
Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: A molecular and culture-based investigation
-
DiGiulio DB, Romero R, Amogan HP, et al. Microbial prevalence, diversity and abundance in amniotic fluid during preterm labor: A molecular and culture-based investigation. PLoS One 2008;3:e3056.
-
(2008)
PLoS One
, vol.3
-
-
DiGiulio, D.B.1
Romero, R.2
Amogan, H.P.3
-
5
-
-
75349111298
-
Gut microbiota: Changes throughout the lifespan from infancy to elderly
-
O'Toole PW, Claesson MJ. Gut microbiota: changes throughout the lifespan from infancy to elderly. Int Dairy J 2010;20:281-91.
-
(2010)
Int Dairy J
, vol.20
, pp. 281-291
-
-
O'Toole, P.W.1
Claesson, M.J.2
-
6
-
-
33748415364
-
Factors influencing the composition of the intestinal microbiota in early infancy
-
DOI 10.1542/peds.2005-2824
-
Penders J, Thijs C, Vink C, et al. Factors influencing the composition of the intestinal microbiota in early infancy. Pediatrics 2006;118:511-21. (Pubitemid 46085405)
-
(2006)
Pediatrics
, vol.118
, Issue.2
, pp. 511-521
-
-
Penders, J.1
Thijs, C.2
Vink, C.3
Stelma, F.F.4
Snijders, B.5
Kummeling, I.6
Van Den, B.P.A.7
Stobberingh, E.E.8
-
8
-
-
58449119188
-
Establishment of the gut microbiota in Western infants
-
Adlerberth I, Wold AE. Establishment of the gut microbiota in Western infants. Acta Paediatr 2009;98:229-38.
-
(2009)
Acta Paediatr
, vol.98
, pp. 229-238
-
-
Adlerberth, I.1
Wold, A.E.2
-
9
-
-
0141942752
-
Intestinal microflora in early infancy: Composition and development
-
Fanaro S, Chierici R, Guerrini P, et al. Intestinal microflora in early infancy: composition and development. Acta Paediatr 2003;92:48-55. (Pubitemid 37239252)
-
(2003)
Acta Paediatrica, International Journal of Paediatrics, Supplement
, vol.91
, Issue.441
, pp. 48-55
-
-
Fanaro, S.1
Chierici, R.2
Guerrini, P.3
Vigi, V.4
-
10
-
-
0034460430
-
Duodenal microflora in very-low-birth-weight neonates and relation to necrotizing enterocolitis
-
Hoy CM, Wood CM, Hawkey PM, et al. Duodenal microflora in very-low-birth-weight neonates and relation to necrotizing enterocolitis. J Clin Microbiol 2000;38:4539-47. (Pubitemid 32244546)
-
(2000)
Journal of Clinical Microbiology
, vol.38
, Issue.12
, pp. 4539-4547
-
-
Hoy, C.M.1
Wood, C.M.2
Hawkey, P.M.3
Puntis, J.W.L.4
-
11
-
-
0032844102
-
Stool microflora in extremely low birthweight infants
-
Gewolb IH, Schwalbe RS, Taciak VL, et al. Stool microflora in extremely low birthweight infants. Arch Dis Child 1999;80:F167-73. (Pubitemid 29453033)
-
(1999)
Archives of Disease in Childhood: Fetal and Neonatal Edition
, vol.80
, Issue.3
-
-
Gewolb, I.H.1
Schwalbe, R.S.2
Taciak, V.L.3
Harrison, T.S.4
Panigrahi, P.5
-
12
-
-
79959673066
-
Meeting the nutritional needs of the low-birth-weight infant
-
Ziegler EE. Meeting the nutritional needs of the low-birth-weight infant. Ann Nutr Metabol 2011;58:8-18.
-
(2011)
Ann Nutr Metabol
, vol.58
, pp. 8-18
-
-
Ziegler, E.E.1
-
13
-
-
61949147274
-
Proton pump inhibitor use and enteric infections
-
Dial MS. Proton pump inhibitor use and enteric infections. Amer J Gastroenterol 2009;104:S10-16.
-
(2009)
Amer J Gastroenterol
, vol.104
-
-
Dial, M.S.1
-
14
-
-
0035078602
-
Simultaneous monitoring of gastric and oesophageal pH reveals limitations of conventional oesophageal pH monitoring in milk fed infants
-
DOI 10.1136/adc.84.3.273
-
Mitchell DJ, McClure BG, Tubman TRJ. Simultaneous monitoring of gastric and oesophageal pH reveals limitations of conventional oesophageal pH monitoring in milk fed infants. Arch Dis Child 2001;84:273-76. (Pubitemid 32250842)
-
(2001)
Archives of Disease in Childhood
, vol.84
, Issue.3
, pp. 273-276
-
-
Mitchell, D.J.1
McClure, B.G.2
Tubman, T.R.J.3
-
15
-
-
0023840513
-
Maturation of the lower oesophageal sphincter in the preterm baby
-
Newell SJ, Sarkar PK, Durbin GM, et al. Maturation of the lower esohaggeal sphincter in the preterm baby. Gut 1988;29:167-72. (Pubitemid 18078884)
-
(1988)
Gut
, vol.29
, Issue.2
, pp. 167-172
-
-
Newell, S.J.1
Sarkar, P.K.2
Durbin, G.M.3
Booth, I.W.4
McNeish, A.S.5
-
16
-
-
84879499300
-
Gastric pH in healthy preterm infants - Effect of age and feeding type
-
Sondheimer JM, Clark DA. Gastric pH in healthy preterm infants - effect of age and feeding type. Gastroenterology 1985;88:1593-93.
-
(1985)
Gastroenterology
, vol.88
, pp. 1593-1593
-
-
Sondheimer, J.M.1
Clark, D.A.2
-
17
-
-
80255138325
-
Pyrosequencing-based Molecular Monitoring of the Intestinal Bacterial Colonization in Preterm Infants
-
Chang JY, Shin SM, Chun J, et al. Pyrosequencing-based Molecular Monitoring of the Intestinal Bacterial Colonization in Preterm Infants. J Pediatr Gastroenterol Nutr 2011;53:512-19.
-
(2011)
J Pediatr Gastroenterol Nutr
, vol.53
, pp. 512-519
-
-
Chang, J.Y.1
Shin, S.M.2
Chun, J.3
-
18
-
-
79951576644
-
Dynamics and clinical evolution of bacterial gut microflora in extremely premature patients
-
Jacquot A, Neveu D, Aujoulat F, et al. Dynamics and clinical evolution of bacterial gut microflora in extremely premature patients. J Ped 2011;158:390-96.
-
(2011)
J Ped
, vol.158
, pp. 390-396
-
-
Jacquot, A.1
Neveu, D.2
Aujoulat, F.3
-
19
-
-
0035007355
-
Hypothesis: Inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis
-
DOI 10.1096/fj.00-0833hyp
-
Claud EC, Walker WA. Hypothesis: inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis. Faseb J 2001;15:1398-403. (Pubitemid 32531817)
-
(2001)
FASEB Journal
, vol.15
, Issue.8
, pp. 1398-1403
-
-
Claud, E.C.1
Walker, W.A.2
-
20
-
-
78751625682
-
Medical progress: Necrotizing enterocolitis
-
Neu J, Walker WA. Medical progress: necrotizing enterocolitis. New Eng J Med 2011;364:255-64.
-
(2011)
New Eng J Med
, vol.364
, pp. 255-264
-
-
Neu, J.1
Walker, W.A.2
-
21
-
-
0021687428
-
Pathogenesis and prevention of necrotizing enterocolitis: A hypothesis based on personal observation and a review of the literature
-
Kosloske AM. Pathogenesis and prevention of necrotizing enterocolitis- a hypothesis based on personal observation and a review of the literature. Pediatrics 1984;74:1086-92. (Pubitemid 15183931)
-
(1984)
Pediatrics
, vol.74
, Issue.6
, pp. 1086-1092
-
-
Kosloske, A.M.1
-
22
-
-
79960555570
-
Correlation of rRNA gene amplicon pyrosequencing and bacterial culture for microbial compositional analysis of faecal samples from elderly Irish subjects
-
O'Sullivan O, Coakley M, Lakshminarayanan B, et al. Correlation of rRNA gene amplicon pyrosequencing and bacterial culture for microbial compositional analysis of faecal samples from elderly Irish subjects. J Appl Microbiol 2011;111:467-73.
-
(2011)
J Appl Microbiol
, vol.111
, pp. 467-473
-
-
O'Sullivan, O.1
Coakley, M.2
Lakshminarayanan, B.3
-
23
-
-
69249109724
-
Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine
-
Claesson MJ, O'Sullivan O, Wang Q, et al. Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine. PLoS One 2009;4:e6669.
-
(2009)
PLoS One
, vol.4
-
-
Claesson, M.J.1
O'Sullivan, O.2
Wang, Q.3
-
24
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul SF, Madden TL, Schaffer AA, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nuc Acid Res 1997;25:3389-402. (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
25
-
-
37549027613
-
SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
-
Pruesse E, Quast C, Knittel K, et al. SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nuc Acid Res 2007;35:7188-96.
-
(2007)
Nuc Acid Res
, vol.35
, pp. 7188-7196
-
-
Pruesse, E.1
Quast, C.2
Knittel, K.3
-
26
-
-
38649092410
-
Dendroscope: An interactive viewer for large phylogenetic trees
-
Huson DH, Richter DC, Rausch C, et al. Dendroscope: an interactive viewer for large phylogenetic trees. BMC Bioinformatics 2007;8:460.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 460
-
-
Huson, D.H.1
Richter, D.C.2
Rausch, C.3
-
27
-
-
49649087440
-
Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
-
Urich T, Lanzen A, Qi J, et al. Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS One 2008;3:e2527.
-
(2008)
PLoS One
, vol.3
-
-
Urich, T.1
Lanzen, A.2
Qi, J.3
-
28
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, et al. QIIME allows analysis of high-throughput community sequencing data. Nat Meth 2010;7:335-36.
-
(2010)
Nat Meth
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
-
29
-
-
79952006773
-
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
-
Haas BJ, Gevers D, Earl AM, et al. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. Genome Res. 2011;21:494-504.
-
(2011)
Genome Res
, vol.21
, pp. 494-504
-
-
Haas, B.J.1
Gevers, D.2
Earl, A.M.3
-
30
-
-
77949718257
-
FastTree 2 - approximately maximum-likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP. FastTree 2 - approximately maximum-likelihood trees for large alignments. PLoS One 2010;5:e9490.
-
(2010)
PLoS One
, vol.5
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
31
-
-
70350509577
-
KING (Kinemage, Next Generation): A versatile interactive molecular and scientific visualization program
-
Chen VB, Davis IW, Richardson DC. KING (Kinemage, Next Generation): a versatile interactive molecular and scientific visualization program. Prot Sci 2009;18:2403-09.
-
(2009)
Prot Sci
, vol.18
, pp. 2403-2409
-
-
Chen, V.B.1
Davis, I.W.2
Richardson, D.C.3
-
32
-
-
82955201588
-
Beyond bacteria: A study of the enteric microbial consortium in extremely low birth weight infants
-
La Tuga SM, Ellis JC, Cotton CM, et al. Beyond bacteria: a study of the enteric microbial consortium in extremely low birth weight infants. PloS One 2011;6:e27858.
-
(2011)
PloS One
, vol.6
-
-
La Tuga, S.M.1
Ellis, J.C.2
Cotton, C.M.3
-
33
-
-
84856025686
-
Establishment and development of intestinal microbiota in preterm neonates
-
Arboleya S, Binetti A, Salazar N, et al. Establishment and development of intestinal microbiota in preterm neonates. FEMS Microbiol Ecol 2012;79:763-72.
-
(2012)
FEMS Microbiol Ecol
, vol.79
, pp. 763-772
-
-
Arboleya, S.1
Binetti, A.2
Salazar, N.3
-
34
-
-
77956059106
-
Investigation of the intestinal microbiota in preterm infants using different methods
-
Rouge C, Goldenberg O, Ferraris L, et al. Investigation of the intestinal microbiota in preterm infants using different methods. Anaerobe 2010;16:362-70.
-
(2010)
Anaerobe
, vol.16
, pp. 362-370
-
-
Rouge, C.1
Goldenberg, O.2
Ferraris, L.3
-
35
-
-
33744940012
-
The intestinal bacterial colonisation in preterm infants: A review of the literature
-
DOI 10.1016/j.clnu.2006.03.002, PII S0261561406000604
-
Westerbeek EAM, van den Berg A, Lafeber HN, et al. The intestinal bacterial colonisation in preterm infants: a review of the literature. Clin Nutr 2006;25:361-8. (Pubitemid 43843032)
-
(2006)
Clinical Nutrition
, vol.25
, Issue.3
, pp. 361-368
-
-
Westerbeek, E.A.M.1
Van Den, B.A.2
Lafeber, H.N.3
Knol, J.4
Fetter, W.P.F.5
Van Elburg, R.M.6
-
36
-
-
34247636634
-
Conditions of bifidobacterial colonization in preterm infants: A prospective analysis
-
DOI 10.1097/MPG.0b013e3180406b20, PII 0000517620070500000007
-
Butel M-J, Suau A, Campeotto F, et al. Conditions of bifidobacterial colonization in preterm infants: a prospective analysis. J Pediatr Gastroenterol Nutr 2007;44:577-82. (Pubitemid 46684358)
-
(2007)
Journal of Pediatric Gastroenterology and Nutrition
, vol.44
, Issue.5
, pp. 577-582
-
-
Butel, M.-J.1
Suau, A.2
Campeotto, F.3
Magne, F.4
Aires, J.5
Ferraris, L.6
Kalach, N.7
Leroux, B.8
Dupont, C.9
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