Tumor marker detection by aptamer-functionalized graphene oxide

Current Organic Chemistry

Volumn 17, Issue 2, 2013, Pages 132-136

  Lin, Ming Yu ^a,b   Lu, Yen Pei ^a   Grumezescu, Alexandru Mihai ^c   Ho, Fu Han ^d   Kao, Ying Hsien ^e   Yang, Yuh Shyong ^a   Yang, Chih Hui ^f  

^a NATIONAL CHIAO TUNG UNIVERSITY   (Taiwan)

^b NATIONAL APPLIED RESEARCH LABORATORIES   (Taiwan)

^c University Politehnica of Bcharest   (Romania)

^d NATIONAL TAIWAN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Taiwan)

^e E DA HOSPITAL   (Taiwan)

^f I SHOU UNIVERSITY   (Taiwan)

Author keywords

Aptamers; Biosensors; Functionalization; Graphene oxide; Platelet derived growth factors; Tumor marker

Indexed keywords

BIOSENSORS; DNA; GRAPHENE; PLATELETS; THICKNESS MEASUREMENT;

APTAMERS; BIOLOGICAL APPLICATIONS; DNA APTAMER; DNA-PROTEINS; FUNCTIONALIZATIONS; FUNCTIONALIZED GRAPHENE; GRAPHENE OXIDES; MARKER DETECTIONS; PLATELET-DERIVED GROWTH FACTORS; TUMOR MARKERS;

TUMORS;

EID: 84879128426     PISSN: 13852728     EISSN: None     Source Type: Journal    
DOI: 10.2174/1385272811317020008     Document Type: Article

References (22)

1. Gorelik, E.; Landsittel, D. P.; Marrangoni, A. M.; Modugno, F.; Velikokhatnaya, L.; Winans, M. T.; Bigbee, W. L.; Herberman, R. B.; Lokshin, A. E., Multiplexed immunobead-based cytokine profiling for early detection of ovarian cancer. Cancer Epidemiol. Biomarkers Prev., 2005, 14 (4), 981-987.
2. Sonoda, T.; Kobayashi, H.; Kaku, T.; Hirakawa, T.; Nakano, H., Expression of angiogenesis factors in monolayer culture, multicellular spheroid and in vivo transplanted tumor by human ovarian cancer cell lines. Cancer Lett, 2003, 196 (2), 229-237.
3. Versnel, M. A.; Haarbrink, M.; Langerak, A. W.; de Laat, P. A. J. M.; Hagemeijer, A.; van der Kwast, T. H.; van den Berg-Bakker, L. A. M.; Schrier, P. I, Human ovarian tumors of epithelial origin express PDGF in vitro and in vivo. Cancer Genet. and Cytogenet, 1994, 73 (1), 60-64.
4. Novoselov, K.; Geim, A.; Morozov, S.; Jiang, D.; Zhang, Y.; Dubonos, S.; Grigorieva, I.; Firsov, A., Electric field effect in atomically thin carbon films. Science, 2004, 306 (5696), 666-669.
5. Liu, F.; Choi, J. Y.; Seo, T. S., Graphene oxide arrays for detecting specific DNA hybridization by fluorescence resonance energy transfer. Biosens. And Bioelectron., 2010, 25 (10), 2361-2365.
6. Sowerby, S. J.; Cohn, C. A.; Heckl, W. M.; Holm, N. G., Differential adsorption of nucleic acid bases: Relevance to the origin of life. Proc. Natl. Acad. Sci., 2001, 98 (3), 820-822.
7. Sowerby, S. J.; Edelwirth, M.; Heckl, W. M., Self-assembly at the prebiotic solid-liquid interface: Structures of self-assembled monolayers of adenine and guanine bases formed on inorganic surfaces. J. Phys. Chem. B, 1998, 102 (30), 5914-5922.
8. Manohar, S.; Mantz, A. R.; Bancroft, K. E.; Hui, C. Y.; Jagota, A.; Vezenov, D. V., Peeling single-stranded DNA from graphite surface to determine oligonucleotide binding energy by force spectroscopy. Nano lett, 2008, 8 (12), 4365-4372.
9. Feng, L.; Wu, L.; Wang, J.; Ren, J.; Miyoshi, D.; Sugimoto, N.; Qu, X., Detection of a Prognostic Indicator in Early Stage Cancer Using Functionalized Graphene Based Peptide Sensors. Adv. Mate., 2012, 24, 125-131.
10. Bunka, D. H. J.; Stockley, P. G., Aptamers come of age-at last. Nat. Rev. Microbio., 2006, 4 (8), 588-596.
11. Jhaveri, S.; Rajendran, M.; Ellington, A. D., In vitro selection of signaling aptamers. Nat. Biotechnol., 2000, 18 (12), 1293-1297.
12. Proske, D.; Blank, M.; Buhmann, R.; Resch, A., Aptamers-basic research, drug development, and clinical applications. Appl. Microbiol Biotechnol., 2005, 69 (4), 367-374.
13. Yang, R.; Tang, Z.; Yan, J.; Kang, H.; Kim, Y.; Zhu, Z.; Tan, W., Noncovalent assembly of carbon nanotubes and single-stranded DNA: an effective sensing platform for probing biomolecular interactions. Anal. Chem., 2008, 80 (19), 7408-7413.
14. Kovtyukhova, N. I.; Ollivier, P. J.; Martin, B. R.; Mallouk, T. E.; Chizhik, S. A.; Buzaneva, E. V.; Gorchinskiy, A. D., Layer-by-layer assembly of ultrathin composite films from micron-sized graphite oxide sheets and polycations. Chem. Mater., 1999, 11 (3), 771-778.
15. Xu, Y.; Bai, H.; Lu, G.; Li, C.; Shi, G., Flexible graphene films via the filtration of water-soluble noncovalent functionalized graphene sheets. J. Am. Chem. Soc., 2008, 130 (18), 5856-5857.
16. Yi, J. W.; Park, J.; Singh, N.; Lee, I. J.; Kim, K. S.; Kim, B. H., Quencher-free molecular beacon: Enhancement of the signal-to-background ratio with graphene oxide. Bioorg. Med. Chem. Lett., 2011, 21 (2), 704-706.
17. Yang, L.; Fung, C. W.; Cho, E. J.; Ellington, A. D., Real-time rolling circle amplification for protein detection. Anal. Chem., 2007, 79 (9), 3320-3329.
18. Zuker, M., Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 2003, 31 (13), 3406-3415.
19. Markham, N. R.; Zuker, M., DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res., 2005, 33 (suppl 2), W577-W581;
20. Markham, N.; Zuker, M., Software for nucleic acid folding and hybridization. Methods Mol. Biol., 2008, 453 (1), 3-31.
21. Lin, M. Y.; Ho, F. H.; Yang, C. Y.; Yeh, J. A.; Yang, Y. S., Functionalization, re-functionalization and rejuvenation of ssDNA nanotemplates. Chem. Comm., 2012, 48, 4902-4904.
22. Loh, K. P.; Bao, Q.; Eda, G.; Chhowalla, M., Graphene oxide as a chemically tunable platform for optical applications. Nat. Chem., 2010, 2 (12), 1015-1024.