메뉴 건너뛰기




Volumn 8, Issue 6, 2013, Pages

Proteomic and Biochemical Analyses of the Cotyledon and Root of Flooding-Stressed Soybean Plants

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM ION; CALCIUM OXALATE; HEAT SHOCK PROTEIN 70; VEGETABLE PROTEIN;

EID: 84879033510     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0065301     Document Type: Article
Times cited : (46)

References (33)
  • 1
    • 0041847077 scopus 로고    scopus 로고
    • Review of prospect for germplasm improvement for water-logging tolerance in wheat, barley and oats
    • Setter TL, Waters I, (2003) Review of prospect for germplasm improvement for water-logging tolerance in wheat, barley and oats. Plant Soil 253: 1-34.
    • (2003) Plant Soil , vol.253 , pp. 1-34
    • Setter, T.L.1    Waters, I.2
  • 2
    • 44949119488 scopus 로고    scopus 로고
    • Flooding stress: acclimations and genetic diversity
    • Bailey-Serres J, Voesenek LACJ, (2008) Flooding stress: acclimations and genetic diversity. Annu Rev Plant Biol 59: 313-339.
    • (2008) Annu Rev Plant Biol , vol.59 , pp. 313-339
    • Bailey-Serres, J.1    Voesenek, L.A.C.J.2
  • 3
    • 33751234197 scopus 로고    scopus 로고
    • QTL analysis of flooding tolerance in soybean at an early vegetative growth stage
    • Githiri SM, Watanabe S, Harada K, Takahashi R, (2006) QTL analysis of flooding tolerance in soybean at an early vegetative growth stage. Plant Breed 125: 613-618.
    • (2006) Plant Breed , vol.125 , pp. 613-618
    • Githiri, S.M.1    Watanabe, S.2    Harada, K.3    Takahashi, R.4
  • 4
    • 84855521319 scopus 로고    scopus 로고
    • Proteomics techniques for the development of flood tolerant crops
    • Komatsu S, Hiraga S, Yanagawa Y, (2012) Proteomics techniques for the development of flood tolerant crops. J Proteome Res 11: 68-78.
    • (2012) J Proteome Res , vol.11 , pp. 68-78
    • Komatsu, S.1    Hiraga, S.2    Yanagawa, Y.3
  • 5
    • 65249095341 scopus 로고    scopus 로고
    • Proteome analysis of early-stage soybean seedlings under flooding stress
    • Hashiguchi A, Sakata K, Komatsu S, (2009) Proteome analysis of early-stage soybean seedlings under flooding stress. J Proteome Res 8: 2058-2069.
    • (2009) J Proteome Res , vol.8 , pp. 2058-2069
    • Hashiguchi, A.1    Sakata, K.2    Komatsu, S.3
  • 6
    • 84872961657 scopus 로고    scopus 로고
    • Proteomic analysis of the flooding tolerance mechanism in mutant soybean
    • Komatsu S, Nanjo Y, Nishimura M, (2013a) Proteomic analysis of the flooding tolerance mechanism in mutant soybean. J Proteomics 79: 231-250.
    • (2013) J Proteomics , vol.79 , pp. 231-250
    • Komatsu, S.1    Nanjo, Y.2    Nishimura, M.3
  • 7
    • 0037238767 scopus 로고    scopus 로고
    • Molocular and cellular adaptations of maize to flooding stress
    • Subbaiah CC, Sachs MM, (2003) Molocular and cellular adaptations of maize to flooding stress. Ann Bot 90: 119-127.
    • (2003) Ann Bot , vol.90 , pp. 119-127
    • Subbaiah, C.C.1    Sachs, M.M.2
  • 8
    • 79955037355 scopus 로고    scopus 로고
    • Comparative proteomic profiles of the soybean (Glycine max) root apex and differentiated root zone
    • Mathesius U, Djordjvic MA, Oakes M, Goffard N, Haerizadeh F, et al. (2011) Comparative proteomic profiles of the soybean (Glycine max) root apex and differentiated root zone. Proteomics 11: 1707-1719.
    • (2011) Proteomics , vol.11 , pp. 1707-1719
    • Mathesius, U.1    Djordjvic, M.A.2    Oakes, M.3    Goffard, N.4    Haerizadeh, F.5
  • 9
    • 84888138657 scopus 로고    scopus 로고
    • 'Omics' techniques for identifying flooding-response mechanisms in soybean
    • (on line)
    • Komatsu S, Shirasaka N, Sakata K (2013b) 'Omics' techniques for identifying flooding-response mechanisms in soybean. J Proteomics (on line).
    • (2013) J Proteomics
    • Komatsu, S.1    Shirasaka, N.2    Sakata, K.3
  • 10
    • 80051905614 scopus 로고    scopus 로고
    • Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings
    • Nanjo Y, Maruyama K, Yasue H, Yamaguchi-Shinozaki K, Shinozaki K, et al. (2011) Transcriptional responses to flooding stress in roots including hypocotyl of soybean seedlings. Plant Mol Biol 77: 129-144.
    • (2011) Plant Mol Biol , vol.77 , pp. 129-144
    • Nanjo, Y.1    Maruyama, K.2    Yasue, H.3    Yamaguchi-Shinozaki, K.4    Shinozaki, K.5
  • 11
    • 77955459998 scopus 로고    scopus 로고
    • Comparative proteomic analysis of early-stage soybean seedlings responses to flooding by using gel and gel-free techniques
    • Nanjo Y, Skultety L, Ashraf Y, Komatsu S, (2010) Comparative proteomic analysis of early-stage soybean seedlings responses to flooding by using gel and gel-free techniques. J Proteome Res 9: 3989-4002.
    • (2010) J Proteome Res , vol.9 , pp. 3989-4002
    • Nanjo, Y.1    Skultety, L.2    Ashraf, Y.3    Komatsu, S.4
  • 12
    • 80052631020 scopus 로고    scopus 로고
    • Characterization of a novel flooding stress-responsive alcohol dehydrogenase expressed in soybean roots
    • Komatsu S, Deschamps T, Hiraga S, Kato M, Chiba M, et al. (2011a) Characterization of a novel flooding stress-responsive alcohol dehydrogenase expressed in soybean roots. Plant Mol Biol 77: 309-322.
    • (2011) Plant Mol Biol , vol.77 , pp. 309-322
    • Komatsu, S.1    Deschamps, T.2    Hiraga, S.3    Kato, M.4    Chiba, M.5
  • 13
    • 80052511115 scopus 로고    scopus 로고
    • Comprehensive analysis of mitochondria in roots and hypocotyls of soybean under flooding stress using proteomics and metabolomics techniques
    • Komatsu S, Yamamoto A, Nakamura T, Nouri MZ, Nanjo Y, et al. (2011b) Comprehensive analysis of mitochondria in roots and hypocotyls of soybean under flooding stress using proteomics and metabolomics techniques. J Proteome Res 10: 3993-4004.
    • (2011) J Proteome Res , vol.10 , pp. 3993-4004
    • Komatsu, S.1    Yamamoto, A.2    Nakamura, T.3    Nouri, M.Z.4    Nanjo, Y.5
  • 14
    • 84856654636 scopus 로고    scopus 로고
    • Ubiquitin/proteasome-mediated proteolysis is involved in the response to flooding stress in soybean roots, independent of oxygen limitation
    • Yanagawa Y, Komatsu S, (2012) Ubiquitin/proteasome-mediated proteolysis is involved in the response to flooding stress in soybean roots, independent of oxygen limitation. Plant Sci 185-186: 250-258.
    • (2012) Plant Sci , vol.185-186 , pp. 250-258
    • Yanagawa, Y.1    Komatsu, S.2
  • 15
    • 77951667995 scopus 로고    scopus 로고
    • Identification of flooding stress responsible cascades in root and hypocotyl of soybean using proteome analysis
    • Komatsu S, Sugimoto T, Hoshino T, Nanjo Y, Furukawa K, (2010) Identification of flooding stress responsible cascades in root and hypocotyl of soybean using proteome analysis. Amino Acids 38: 729-738.
    • (2010) Amino Acids , vol.38 , pp. 729-738
    • Komatsu, S.1    Sugimoto, T.2    Hoshino, T.3    Nanjo, Y.4    Furukawa, K.5
  • 16
    • 84866179240 scopus 로고    scopus 로고
    • Organ-specific proteomics analysis for identification of response mechanism in soybean seedlings under flooding stress
    • Khatoon A, Rehman S, Hiraga S, Makino T, Komatsu S, (2012a) Organ-specific proteomics analysis for identification of response mechanism in soybean seedlings under flooding stress. J Proteomics 75: 5706-5723.
    • (2012) J Proteomics , vol.75 , pp. 5706-5723
    • Khatoon, A.1    Rehman, S.2    Hiraga, S.3    Makino, T.4    Komatsu, S.5
  • 17
    • 84872688125 scopus 로고    scopus 로고
    • A comparative proteomics analysis in roots of soybean to compatible symbiotic bacteria under flooding stress
    • Khatoon A, Rehman S, Salavati A, Komatsu S, (2012b) A comparative proteomics analysis in roots of soybean to compatible symbiotic bacteria under flooding stress. Amino Acids 43: 2512-2525.
    • (2012) Amino Acids , vol.43 , pp. 2512-2525
    • Khatoon, A.1    Rehman, S.2    Salavati, A.3    Komatsu, S.4
  • 18
    • 0030891214 scopus 로고    scopus 로고
    • Two-dimensional imaging of ultraweak photon emission from germinating soybean seedlings with a highly sensitive CCD camera
    • Kobayashi M, Devaraj B, Usa M, Tanno Y, Takeda M, et al. (1997) Two-dimensional imaging of ultraweak photon emission from germinating soybean seedlings with a highly sensitive CCD camera. Photochem Photobiol 65: 535-537.
    • (1997) Photochem Photobiol , vol.65 , pp. 535-537
    • Kobayashi, M.1    Devaraj, B.2    Usa, M.3    Tanno, Y.4    Takeda, M.5
  • 19
    • 0030454189 scopus 로고    scopus 로고
    • Ultraweak luminescence generated by sweet potato and Fusarium oxysporum interactions associated with a defense response
    • Makino T, Kato K, Iyozumi H, Honzawa H, Tachiiri Y, et al. (1996) Ultraweak luminescence generated by sweet potato and Fusarium oxysporum interactions associated with a defense response. Photochem Photobiol 64: 953-956.
    • (1996) Photochem Photobiol , vol.64 , pp. 953-956
    • Makino, T.1    Kato, K.2    Iyozumi, H.3    Honzawa, H.4    Tachiiri, Y.5
  • 20
    • 84862666002 scopus 로고    scopus 로고
    • Proteomic study of β-aminobutyricacid-mediated cadmium stress alleviation in soybean
    • Hossain Z, Makino T, Komatsu S, (2012) Proteomic study of β-aminobutyricacid-mediated cadmium stress alleviation in soybean. J Proteomics 75: 4151-4164.
    • (2012) J Proteomics , vol.75 , pp. 4151-4164
    • Hossain, Z.1    Makino, T.2    Komatsu, S.3
  • 21
    • 85027953272 scopus 로고    scopus 로고
    • Characterization of ascorbate peroxidase in soybean under flooding and drought stresses
    • Kausar R, Hossain Z, Makino T, Komatsu S, (2012) Characterization of ascorbate peroxidase in soybean under flooding and drought stresses. Mol Biol Rep 39: 10573-10579.
    • (2012) Mol Biol Rep , vol.39 , pp. 10573-10579
    • Kausar, R.1    Hossain, Z.2    Makino, T.3    Komatsu, S.4
  • 22
    • 70349970273 scopus 로고    scopus 로고
    • A comprehensive analysis of the soybean genes and proteins expressed under flooding stress using transcriptome and proteome techniques
    • Komatsu S, Yamamoto R, Nanjo Y, Mikami Y, Yunokawa H, et al. (2009) A comprehensive analysis of the soybean genes and proteins expressed under flooding stress using transcriptome and proteome techniques. J Proteome Res 8: 4766-4778.
    • (2009) J Proteome Res , vol.8 , pp. 4766-4778
    • Komatsu, S.1    Yamamoto, R.2    Nanjo, Y.3    Mikami, Y.4    Yunokawa, H.5
  • 23
    • 0032725933 scopus 로고    scopus 로고
    • Cell-mediated crystallization of calcium oxalate in plants
    • Webb MA, (1999) Cell-mediated crystallization of calcium oxalate in plants. Plant Cell 11: 751-761.
    • (1999) Plant Cell , vol.11 , pp. 751-761
    • Webb, M.A.1
  • 24
    • 20444368468 scopus 로고    scopus 로고
    • Calcium oxalate in plants: formation and function
    • Franceschi VR, Nakata PA, (2005) Calcium oxalate in plants: formation and function. Annu Rev Plant Biol 56: 41-71.
    • (2005) Annu Rev Plant Biol , vol.56 , pp. 41-71
    • Franceschi, V.R.1    Nakata, P.A.2
  • 25
    • 0034872768 scopus 로고    scopus 로고
    • Calcium oxalate crystals in developing seeds of soybean
    • Ilarslan H, Palmer RG, Horner HT, (2001) Calcium oxalate crystals in developing seeds of soybean. Ann Bot 88: 243-257.
    • (2001) Ann Bot , vol.88 , pp. 243-257
    • Ilarslan, H.1    Palmer, R.G.2    Horner, H.T.3
  • 26
    • 34547690923 scopus 로고    scopus 로고
    • Localization of myo-inositol phosphate synthase (GmMIPS-1) during the early stages of soybean seed development
    • Chiera JM, Grabau EA, (2007) Localization of myo-inositol phosphate synthase (GmMIPS-1) during the early stages of soybean seed development. J Exp Bot 58: 2261-2268.
    • (2007) J Exp Bot , vol.58 , pp. 2261-2268
    • Chiera, J.M.1    Grabau, E.A.2
  • 27
    • 1242269219 scopus 로고    scopus 로고
    • Mechanisms for regulation of Hsp70 function by Hsp40
    • Fan CY, Lee S, Cyr DM, (2003) Mechanisms for regulation of Hsp70 function by Hsp40. Cell Stress Chaperon 8: 309-316.
    • (2003) Cell Stress Chaperon , vol.8 , pp. 309-316
    • Fan, C.Y.1    Lee, S.2    Cyr, D.M.3
  • 28
    • 0027308741 scopus 로고
    • Eukaryotic homologs of Escherichia coli Dnaj - a diverse protein family that functions with Hsp70 stress proteins
    • Caplan AJ, Cyr DM, Douglas MG, (1993) Eukaryotic homologs of Escherichia coli Dnaj- a diverse protein family that functions with Hsp70 stress proteins. Mol Biol Cell 4: 555-563.
    • (1993) Mol Biol Cell , vol.4 , pp. 555-563
    • Caplan, A.J.1    Cyr, D.M.2    Douglas, M.G.3
  • 29
    • 84863485565 scopus 로고    scopus 로고
    • Functional characterization of orchardgrass cytosolic Hsp70 (DgHsp70) and the negative regulation by Ca2+/AtCaM2 binding
    • Cha JY, Su'udi M, Kim WY, Kim DR, Kwak YS, et al. (2012) Functional characterization of orchardgrass cytosolic Hsp70 (DgHsp70) and the negative regulation by Ca2+/AtCaM2 binding. Plant Physiol Biochem 58: 29-36.
    • (2012) Plant Physiol Biochem , vol.58 , pp. 29-36
    • Cha, J.Y.1    Su'udi, M.2    Kim, W.Y.3    Kim, D.R.4    Kwak, Y.S.5
  • 30
    • 38049120303 scopus 로고    scopus 로고
    • A heat-activated MAP kinase (HAMK) as a mediator of heat shock response in tobacco cells
    • Suri SS, Dhindsa RS, (2008) A heat-activated MAP kinase (HAMK) as a mediator of heat shock response in tobacco cells. Plant Cell Environ 31: 218-226.
    • (2008) Plant Cell Environ , vol.31 , pp. 218-226
    • Suri, S.S.1    Dhindsa, R.S.2
  • 31
    • 12444323152 scopus 로고    scopus 로고
    • Biophoton imaging: A nondestructive method for assaying R gene responses
    • Bennett M, Mehta M, Grant M, (2005) Biophoton imaging: A nondestructive method for assaying R gene responses. Mol. Plant-Microbe Interact 18: 95-102.
    • (2005) Mol. Plant-Microbe Interact , vol.18 , pp. 95-102
    • Bennett, M.1    Mehta, M.2    Grant, M.3
  • 32
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM, (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 33
    • 74549221016 scopus 로고    scopus 로고
    • Genome sequence of the palaeopolyploid soybean Nature
    • Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, et al. (2010) Genome sequence of the palaeopolyploid soybean Nature. 463: 178-183.
    • (2010) , vol.463 , pp. 178-183
    • Schmutz, J.1    Cannon, S.B.2    Schlueter, J.3    Ma, J.4    Mitros, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.