Effects of Agaricus lilaceps Fairy Rings on Soil Aggregation and Microbial Community Structure in Relation to Growth Stimulation of Western Wheatgrass (Pascopyrum smithii) in Eastern Montana Rangeland

Microbial Ecology

Volumn 66, Issue 1, 2013, Pages 120-131

  Caesar TonThat, The Can ^a   Espeland, Erin ^a   Caesar, Anthony J ^a   Sainju, Upendra M ^a   Lartey, Robert T ^a   Gaskin, John F ^a  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AGARICUS; AGARICUS LILACEPS; BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); FUNGI; PASCOPYRUM SMITHII; PSEUDOMONAS FLUORESCENS; STENOTROPHOMONAS MALTOPHILIA;

SOIL;

AGARICUS; BACTERIA; CHEMISTRY; CLASSIFICATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHYLOGENY; PHYSIOLOGY; POACEAE; RHIZOSPHERE; SOIL; UNITED STATES;

AGARICUS; BACTERIA; MOLECULAR SEQUENCE DATA; MONTANA; PHYLOGENY; POACEAE; RHIZOSPHERE; SOIL; SOIL MICROBIOLOGY;

EID: 84878761517     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-013-0194-3     Document Type: Article

References (66)

1. Acosta-Martínez V, Cruz L, Sotomayor-Ramírez D, Pérez-Alegría L (2007) Enzyme activities as affected by soil properties and land use in a tropical watershed. Appl Soil Ecol 35: 35-45.
2. Acosta-Martínez V, Zobeck TM, Allen V (2004) Soil microbial, chemical and physical properties in continuous cotton and integrated crop-livestock systems. Soil Sci Soc Am J 68: 1875-1884.
3. Bååth E, Anderson TH (2003) Comparison of soil fungal/bacterial ratios in a pH gradient using physiological and PLFA-based techniques. Soil Biol Biochem 35: 9355-9963.
4. Bailey VL, Smith JL, Bolton H (2002) Fungal-to-bacterial ratios in soils investigated for enhanced C sequestration. Soil Biol Biochem 34: 997-1008.
5. Bayliss-Elliott JS (1926) Concerning "fairy rings" in pastures. Ann Appl Biol 13: 277-288.
6. Beare MH, Hendrix PF, Coleman DC (1994) Water-stable aggregates and organic matter fractions in conventional and no-tillage soils. Soil Sci Soc Am J 58: 777-786.
7. Bonanomi G, Mingo A, Incerti G, Mazzoleni S, Allegrezza M (2012) Fairy rings by a killer fungus foster plant diversity in species-rich grassland. J Veg Sci 23: 236-248.
8. Brimecombe MJ, De Leij FA, Lynch JM (2001) The effects of root exudates on rhizosphere microbial populations. In: Pinton R, Varanini Z, Nannipieri P (eds) The rhizosphere. Biochemistry and organic substances at the soil-plant interface. Marcel Dekker, New York, pp 95-140.
9. Buyer JS, Roberts DP, Russek-Cohen ER (1999) Microbial community structure and function in the spermosphere as affected by soil and seed type. Can J Microbiol 45: 138-144.
10. Buyer JS, Sasser M (2012) High throughout phospholipid fatty acid analysis of soils. Appl Soil Ecol 61: 127-130.
11. Caesar-TonThat TC (2002) Soil binding properties of mucilage produced by a basidiomycete fungus in a model system. Mycol Res 106: 930-937.
12. Caesar-TonThat TC, Lenssen AW, Caesar AJ, Sainju UM, Gaskin JF (2010) Effects of tillage on microbial populations associated to soil aggregation in dryland spring wheat system. Eur J Soil Biol 46: 119-127.
13. Cromack JK, Caldwell BA (1992) The role of fungi in litter decomposition and nutrient cycling. In: Carroll GC, Wicklow DT (eds) The fungal community: its organization and role in the ecosystem. Marcel Dekker, New York, pp 653-668.
14. Degens BP (1997) Macro-aggregation of soils by biological bonding and binding mechanisms and the factors affecting these: a review. Aust J Soil Res 35: 431-459.
15. Edward PJ (1984) The growth of fairy rings of Agaricus arvensis and their effect upon grassland vegetation and soil. J Ecol 72: 505-513.
16. Ekenler M, Tabatabai MA (2002) B-Glucosaminidase activity of soils: effect of cropping systems and its relationship to nitrogen mineralization. Biol Fertil Soils 36: 307-376.
17. Feng Y, Motta AC, Reeves DW, Burmester CH, van Santen E, Osborne JA (2003) Soil microbial communities under conventional-till and no-till continuous cotton systems. Soil Biol Biochem 35: 1693-1703.
18. Fisher RF (1977) Nitrogen and phosphorus mobilization by the fairy ring fungus, Marasmius oreades (Bolt) Fr. Soil Biol Biochem 9: 239-241.
19. Fox RTV (2006) Fungal foes in your garden: fairy ring mushrooms. Mycologist 20: 36-37.
20. Frostegård A, Bååth E, Tunlid A (1993) Shifts in the structure of soil microbial communities in limed forests by phospholipid fatty acid analysis. Soil Biol Biochem 25: 723-730.
21. Gannon JT, Manilal VB, Alexander M (1991) Relationship between cell surface properties and transport of bacteria through soil. Appl Environ Microbiol 57: 190-193.
22. Gilchrist JE, Campbell JE, Donnelly CB, Peeler JT, Delaney JM (1973) Spiral plate method for bacterial determination. Appl Microbiol 25: 244-252.
23. Glandorf DCM, Sluis IVD, Anderson AJ, Bakker PAHM, Schippers B (1994) Agglutination, adherence and root colonization by fluorescent pseudomonads. Appl Environ Microbiol 60: 1726-1733.
24. Glick BR (1995) The enhancement of plant growth by free-living bacteria. Can J Microbiol 41: 109-117.
25. Griffiths B, Ritz K, Ebblewhite N, Dobson G (2009) Soil microbial community structure: effects of substrate loading rates. Soil Biol Biochem 31: 145-153.
26. Hachisuka Y, Kozuka S, Tsujikawa M (1984) Exosporia and appendages of spores of Bacillus species. Microbiol Immunol 28: 619-624.
27. Hakamori S, Igarashi Y (1993) Gangliosides and glycosphingolipids as modulators of cell growth, adhesion, and transmembrane signaling. Adv Lipid Res 25: 147-162.
28. Hu S, Coleman DC, Beare MH, Hendrix PF (1995) Soil carbohydrates in aggrading and degrading agrosystems: influences of fungi and aggregates. Agric Ecosyst Environ 54: 77-88.
29. Jansson PE, Lindberg B (1983) Structural studies of gellan gum, an extracellular polysaccharide elaborated by Pseudomonas elodea. Carbohydr Res 124: 135-139.
30. Jarvis B, Lach VH, Wood JM (1977) Evaluation of the spiral plate maker for the enumeration of micro-organisms in foods. J Appl Bacteriol 43: 149-157.
31. Jucker BA, Harms H, Zehnder AJB (1996) Adhesion of the positively charged bacterium Stenotrophomonas (Xanthomonas) maltophilia 70401 to glass and Teflon. J Bacteriol 178: 5472-5479.
32. Kemper WD, Rosenau RC (1986) Aggregate stability and size distribution. In: A. Klute (ed) Methods of soil analysis: physical and mineralogical methods, Part 1, 2nd edn. ASA, SSSA Spec Publ No. 9, Madison, pp. 425-442.
33. Konkol N, McNamara CJ, Mitchell R (2010) Fluorometric detection and estimation of fungal biomass on cultural heritage materials. J Microbiol Meth 80: 178-182.
34. Lartey RT, Caesar-TonThat TC, Lenssen AW, Eckhoff J, Hanson S, Evans RG (2010) Direct PCR based detection of Cercospora beticola in field soils. Plant Dis 94: 1100-1104.
35. Latour X, Corberand T, Laguerre G, Allard F, Lemaneau P (1996) The composition of fluorescent pseudomonad populations associated with roots is influenced by plant and soil type. Appl Environ Microbiol 62: 2449-2456.
36. Li B, Logan BE (2004) Bacterial adhesion to glass and metaloxide surfaces. Colloid Surf B 36: 81-90.
37. Marilley L, Aragno M (1999) Phylogenetic diversity of bacterial communities differing in degree of proximity of Lolium perenne and Trifolium repens roots. Appl Soil Ecol 13: 127-136.
38. Mathur SP (1970) Degradation of soil humus by the fairy ring mushroom. Plant Soil 33: 717-720.
39. Meek BD, Rechel ER, Carter LM, DeTar WR, Urie AL (1992) Infiltration rate of a sandy loam soil: effects of traffic, tillage, and plant roots. Soil Sci Soc Am J 56: 908-913.
40. Mehmannavaz R, Prasher SO, Ahmad D (2001) Cell surface properties of rhizobial strains isolated from soils contaminated with hydrocarbons: hydrophobicity and adhesion to sandy soil. Process Biochem 36: 683-688.
41. Mendes IC, Bandick AK, Dick RP, Bottomley PJ (1999) Microbial biomass and activities in soil aggregates affected by winter cover crops. Soil Sci Soc Am J 63: 873-881.
42. Miller HJ, Liljeroth E, Henken G, van Veen JA (1990) Fluctuations in the fluorescent pseudomonad and actinomycete populations in the rhizosphere and rhizoplane during growth of spring wheat. Can J Microbiol 36: 254-258.
43. Miller M, Palojarvi A, Rangger A, Reeslev M, Kjoller A (1998) The use of fluorogenic substrates to measure fungal presence and activity in soil. Appl Environ Microbiol 64: 613-617.
44. Mills AL (2003) Keeping in touch: microbial life on soil particle surfaces. Adv Agron 78: 1-43.
45. NRCS (2002) Plant fact sheet: western wheatgrass. USDA Natural Resources Conservation Service, Washington.
46. Oka N, Hartel PG, Finlay-Moore O, Gagliardi J, Zuberer DA, Fuhrmann JJ, Angle JS, Skipper HD (2000) Misidentification of soil bacteria by fatty acid methyl ester (FAME) and BIOLOG analyses. Biol Fertil Soils 32: 256-258.
47. Parham JA, Deng SP (2000) Detection, quantification and characterization of β-glucosaminidase activity in soil. Soil Biol Biochem 32: 1183-1190.
48. Prosser JI (2007) Microorganisms cycling soil nutrients and their diversity. In: van Elsas JD, Jansson JK, Trevors JT (eds) Modern soil microbiology, 2nd edn. CRC-Taylor & Francis, Boca Raton, pp 237-261.
49. Reasoner DJ, Geldreich EE (1985) A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49: 1-7.
50. Rasse DP, Smucker AJM (1998) Root recolonization of previous root channels in corn and alfalfa rotations. Plant Soil 204: 203-212.
51. Romani AM, Fisher H, Mille-Lindblom C, Tranvik LJ (2006) Interactions of bacteria and fungi on decomposing litter: differential extracellular enzyme activities. Ecology 87: 2559-2569.
52. Sabra W, Zeng A-P, Deckwer WD (2001) Bacterial alginate: physiology, product quality and process aspects. Appl Microbiol Biotechnol 56: 315-325.
53. Shantz HL, Piemeisel RL (1917) Fungus fairy rings in eastern Colorado and their effect on vegetation. J Agr Res 9: 191-245.
54. Six J, Elliott ET, Paustian K (2000) Soil macroaggregate turnover and microaggregate formation: a mechanism for C sequestration under no-tillage agriculture. Soil Biol Biochem 32: 2099-2103.
55. Smit E, Leeflang P, Gommans S, van Den Broek J, van Mil S, Wernars K (2001) Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl Environ Microbiol 67: 2284-2291.
56. Stamets P, Chilton JS (1983) Sterile technique and agar culture. In: Stamets P, Chilton JS (eds) The mushroom cultivator. A practical guide to growing mushroom at home. Agarikon"", Olympia, pp 15-40.
57. Stoline MR (1981) The status of multiple comparisons: simultaneous estimation of all pairwise comparisons in one-way ANOVA designs. Am Stat 35: 134-141.
58. Tabatabai MA, Bremner JM (1969) Use of ρ-nitrophenyl phosphate for assay of soil phosphatase activity. Soil Biol Biochem 1: 301-307.
59. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
60. Tisdall JM, Oades JM (1982) Organic matter and water-stable aggregates in soils. J Soil Sci 33: 141-163.
61. Toohey JI (1983) Fungus fairy rings in soil etiology and chemical ecology. Can Field Nat 97: 9-15.
62. van Overbeek L, van Elsas JD (1997) Adaptation of bacteria to soil conditions: application of molecular physiology in soil microbiology. In: van Elsas JD, Trevors JT, Wellington EM (eds) Modern soil microbiology. Marcel Dekker, New York, pp 441-477.
63. Waldrop MP, Balser TC, Firestone MK (2000) Linking microbial community composition to function in a tropical soil. Soil Biol Biochem 32: 1837-1846.
64. Watt M, McCully ME, Jeffree CE (1993) Plant and bacterial mucilage of the maize rhizosphere: comparison of their soil binding properties and histochemistry in a model system. Plant Soil 151: 151-165.
65. Gavlak R, Horneck D, Miller RO, Kotuby-Amarcher J (eds) (2003) WCC-103. Soil, plant and water reference methods for the western region, 2nd edn. Western Rural Development Center, Logan.
66. White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, New York, pp 315-322.