-
1
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
PMID:9305837
-
Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ. Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 1997; 389:251-60; PMID:9305837; http://dx.doi. org/10.1038/38444
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mäder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
2
-
-
79959484677
-
Signals and combinatorial functions of histone modifications
-
PMID:21529160
-
Suganuma T, Workman JL. Signals and combinatorial functions of histone modifications. Annu Rev Biochem 2011; 80:473-99; PMID:21529160; http://dx.doi.org/10.1146/annurev-biochem-061809-175347
-
(2011)
Annu Rev Biochem
, vol.80
, pp. 473-499
-
-
Suganuma, T.1
Workman, J.L.2
-
3
-
-
0037160103
-
Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20)
-
PMID:12237304
-
Werten S, Mitschler A, Romier C, Gangloff YG, Thuault S, Davidson I, et al. Crystal structure of a subcomplex of human transcription factor TFIID formed by TATA binding protein-associated factors hTAF4 (hTAF(II)135) and hTAF12 (hTAF(II)20). J Biol Chem 2002; 277:45502-9; PMID:12237304; http://dx.doi.org/10.1074/jbc.M206587200
-
(2002)
J Biol Chem
, vol.277
, pp. 45502-45509
-
-
Werten, S.1
Mitschler, A.2
Romier, C.3
Gangloff, Y.G.4
Thuault, S.5
Davidson, I.6
-
4
-
-
0035854374
-
Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex
-
PMID:11461703
-
Kamada K, Shu F, Chen H, Malik S, Stelzer G, Roeder RG, et al. Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. Cell 2001; 106:71-81; PMID:11461703; http://dx.doi.org/10.1016/S0092-8674(01)00417-2
-
(2001)
Cell
, vol.106
, pp. 71-81
-
-
Kamada, K.1
Shu, F.2
Chen, H.3
Malik, S.4
Stelzer, G.5
Roeder, R.G.6
-
5
-
-
27644596379
-
The histone fold subunits of Drosophila CHRAC facilitate nucleosome sliding through dynamic DNA interactions
-
PMID:16260604
-
Hartlepp KF, Fernández-Tornero C, Eberharter A, Grüne T, Müller CW, Becker PB. The histone fold subunits of Drosophila CHRAC facilitate nucleosome sliding through dynamic DNA interactions. Mol Cell Biol 2005; 25:9886-96; PMID:16260604; http://dx.doi.org/10.1128/MCB.25.22.9886-9896.2005
-
(2005)
Mol Cell Biol
, vol.25
, pp. 9886-9896
-
-
Hartlepp, K.F.1
Fernández-Tornero, C.2
Eberharter, A.3
Grüne, T.4
Müller, C.W.5
Becker, P.B.6
-
6
-
-
84872539860
-
Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination
-
PMID:23332751
-
Nardini M, Gnesutta N, Donati G, Gatta R, Forni C, Fossati A, et al. Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination. Cell 2013; 152:132-43; PMID:23332751; http://dx.doi.org/10.1016/j.cell.2012.11.047
-
(2013)
Cell
, vol.152
, pp. 132-143
-
-
Nardini, M.1
Gnesutta, N.2
Donati, G.3
Gatta, R.4
Forni, C.5
Fossati, A.6
-
7
-
-
83755185581
-
NF-Y and the transcriptional activation of CCAAT promoters
-
PMID:22050321
-
Dolfini D, Gatta R, Mantovani R. NF-Y and the transcriptional activation of CCAAT promoters. Crit Rev Biochem Mol Biol 2012; 47:29-49; PMID:22050321; http://dx.doi.org/10.3109/10409238.2011.628970
-
(2012)
Crit Rev Biochem Mol Biol
, vol.47
, pp. 29-49
-
-
Dolfini, D.1
Gatta, R.2
Mantovani, R.3
-
8
-
-
84865852567
-
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
-
PMID:22955990
-
Wang J, Zhuang J, Iyer S, Lin X, Whitfield TW, Greven MC, et al. Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors. Genome Res 2012; 22:1798-812; PMID:22955990; http://dx.doi.org/10.101/gr.39105.12
-
(2012)
Genome Res
, vol.22
, pp. 1798-1812
-
-
Wang, J.1
Zhuang, J.2
Iyer, S.3
Lin, X.4
Whitfield, T.W.5
Greven, M.C.6
-
10
-
-
0037155201
-
NF-Y recruitment of TFIID, multiple interactions with histone fold TAF(II)s
-
PMID:11689552
-
Frontini M, Imbriano C, diSilvio A, Bell B, Bogni A, Romier C, et al. NF-Y recruitment of TFIID, multiple interactions with histone fold TAF(II)s. J Biol Chem 2002; 277:5841-8; PMID:11689552; http://dx.doi.org/101074/jbc.M103651200
-
(2002)
J Biol Chem
, vol.277
, pp. 5841-5848
-
-
Frontini, M.1
Imbriano, C.2
Disilvio, A.3
Bell, B.4
Bogni, A.5
Romier, C.6
-
11
-
-
0026742095
-
Dr1, a TATA-binding protein-associated phosphoprotein and inhibitor of class II gene transcription
-
PMID:1339312
-
Inostroza JA, Mermelstein FH, Ha I, Lane WS, Reinberg D. Dr1, a TATA-binding protein-associated phosphoprotein and inhibitor of class II gene transcription. Cell 1992; 70:477-89; PMID:1339312; http://dx.doi.org/10.1016/0092-8674(92)90172-9
-
(1992)
Cell
, vol.70
, pp. 477-489
-
-
Inostroza, J.A.1
Mermelstein, F.H.2
Ha, I.3
Lane, W.S.4
Reinberg, D.5
-
12
-
-
0029977801
-
A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodimeric histone fold domains
-
PMID:8670811
-
Goppelt A, Stelzer G, Lottspeich F, Meisterernst M. A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodimeric histone fold domains. EMBO J 1996; 15:3105-16; PMID:8670811
-
(1996)
EMBO J
, vol.15
, pp. 3105-3116
-
-
Goppelt, A.1
Stelzer, G.2
Lottspeich, F.3
Meisterernst, M.4
-
13
-
-
77954760923
-
The TATA box regulates TATA-binding protein (TBP) dynamics in vivo
-
PMID:20176488
-
Tora L, Timmers HT. The TATA box regulates TATA-binding protein (TBP) dynamics in vivo. Trends Biochem Sci 2010; 35:309-14; PMID:20176488; http://dx.doi.org/10.1016/j.tibs.2010.01.007
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 309-314
-
-
Tora, L.1
Timmers, H.T.2
-
14
-
-
78649701177
-
Mismatch repair-independent increase in spontaneous mutagenesis in yeast lacking non-essential subunits of DNA polymerase ε
-
PMID:21124948
-
Aksenova A, Volkov K, Maceluch J, Pursell ZF, Rogozin IB, Kunkel TA, et al. Mismatch repair-independent increase in spontaneous mutagenesis in yeast lacking non-essential subunits of DNA polymerase ε. PLoS Genet 2010; 6:e1001209; PMID:21124948; http://dx.doi.org/10.1371/journal.pgen.1001209
-
(2010)
PLoS Genet
, vol.6
-
-
Aksenova, A.1
Volkov, K.2
Maceluch, J.3
Pursell, Z.F.4
Rogozin, I.B.5
Kunkel, T.A.6
-
15
-
-
57749113198
-
Human ATAC Is a GCN5/PCAF-containing acetylase complex with a novel NC2-like histone fold module that interacts with the TATA-binding protein
-
PMID:18838386
-
Wang YL, Faiola F, Xu M, Pan S, Martinez E. Human ATAC Is a GCN5/PCAF-containing acetylase complex with a novel NC2-like histone fold module that interacts with the TATA-binding protein. J Biol Chem 2008; 283:33808-15; PMID:18838386; http://dx.doi.org/10.1074/jbc.M806936200
-
(2008)
J Biol Chem
, vol.283
, pp. 33808-33815
-
-
Wang, Y.L.1
Faiola, F.2
Xu, M.3
Pan, S.4
Martinez, E.5
-
16
-
-
41649100498
-
ATAC is a double histone acetyltransferase complex that stimulates nucleosome sliding
-
PMID:18327268
-
Suganuma T, Gutiérrez JL, Li B, Florens L, Swanson SK, Washburn MP, et al. ATAC is a double histone acetyltransferase complex that stimulates nucleosome sliding. Nat Struct Mol Biol 2008; 15:364-72; PMID:18327268; http://dx.doi.org/10.1038/nsmb.1397
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 364-372
-
-
Suganuma, T.1
Gutiérrez, J.L.2
Li, B.3
Florens, L.4
Swanson, S.K.5
Washburn, M.P.6
-
17
-
-
84858329099
-
ATAC-king the complexity of SAGA during evolution
-
PMID:22426530
-
Spedale G, Timmers HT, Pijnappel WW. ATAC-king the complexity of SAGA during evolution. Genes Dev 2012; 26:527-41; PMID:22426530; http://dx.doi.org/10.1101/gad.184705.111
-
(2012)
Genes Dev
, vol.26
, pp. 527-541
-
-
Spedale, G.1
Timmers, H.T.2
Pijnappel, W.W.3
-
18
-
-
0842267182
-
The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF
-
PMID:14759371
-
Kukimoto I, Elderkin S, Grimaldi M, Oelgeschläger T, Varga-Weisz PD. The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF. Mol Cell 2004; 13:265-77; PMID:14759371; http://dx.doi.org/10.1016/S1097-2765(03)00523-9
-
(2004)
Mol Cell
, vol.13
, pp. 265-277
-
-
Kukimoto, I.1
Elderkin, S.2
Grimaldi, M.3
Oelgeschläger, T.4
Varga-Weisz, P.D.5
-
19
-
-
33845925515
-
Double-stranded DNA binding, an unusual property of DNA polymerase epsilon, promotes epigenetic silencing in Saccharomyces cerevisiae
-
PMID:16916794
-
Tsubota T, Tajima R, Ode K, Kubota H, Fukuhara N, Kawabata T, et al. Double-stranded DNA binding, an unusual property of DNA polymerase epsilon, promotes epigenetic silencing in Saccharomyces cerevisiae. J Biol Chem 2006; 281:32898-908; PMID:16916794; http://dx.doi.org/10.1074/jbc.M606637200
-
(2006)
J Biol Chem
, vol.281
, pp. 32898-32908
-
-
Tsubota, T.1
Tajima, R.2
Ode, K.3
Kubota, H.4
Fukuhara, N.5
Kawabata, T.6
-
20
-
-
4844230185
-
Identification and cloning of two putative subunits of DNA polymerase epsilon in fission yeast
-
PMID:15388803
-
Spiga MG, D'Urso G. Identification and cloning of two putative subunits of DNA polymerase epsilon in fission yeast. Nucleic Acids Res 2004; 32:4945-53; PMID:15388803; http://dx.doi.org/10.1093/nar/gkh811
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 4945-4953
-
-
Spiga, M.G.1
D'urso, G.2
-
21
-
-
34547864553
-
Distinct GCN5/PCAF-containing complexes function as co-activators and are involved in transcription factor and global histone acetylation
-
PMID:17694077
-
Nagy Z, Tora L. Distinct GCN5/PCAF-containing complexes function as co-activators and are involved in transcription factor and global histone acetylation. Oncogene 2007; 26:5341-57; PMID:17694077; http://dx.doi.org/10.1038/sj.onc.1210604
-
(2007)
Oncogene
, vol.26
, pp. 5341-5357
-
-
Nagy, Z.1
Tora, L.2
-
22
-
-
70350376876
-
TAF4/4b x TAF12 displays a unique mode of DNA binding and is required for core promoter function of a subset of genes
-
PMID:19635797
-
Gazit K, Moshonov S, Elfakess R, Sharon M, Mengus G, Davidson I, et al. TAF4/4b x TAF12 displays a unique mode of DNA binding and is required for core promoter function of a subset of genes. J Biol Chem 2009; 284:26286-96; PMID:19635797; http://dx.doi.org/10.1074/jbc.M109.011486
-
(2009)
J Biol Chem
, vol.284
, pp. 26286-26296
-
-
Gazit, K.1
Moshonov, S.2
Elfakess, R.3
Sharon, M.4
Mengus, G.5
Davidson, I.6
-
23
-
-
33747603251
-
TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter
-
PMID:16895980
-
nd, Tjian R. TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter. Proc Natl Acad Sci U S A 2006; 103:12347-52; PMID:16895980; http://dx.doi.org/10.1073/pnas.0605499103
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 12347-12352
-
-
Wright, K.J.1
Marr II, M.T.2
Tjian, R.3
-
24
-
-
84873093285
-
The architecture of human general transcription factor TFIID core complex
-
PMID:23292512
-
Bieniossek C, Papai G, Schaffitzel C, Garzoni F, Chaillet M, Scheer E, et al. The architecture of human general transcription factor TFIID core complex. Nature 2013; 493:699-702; PMID:23292512; http://dx.doi.org/10.1038/nature11791
-
(2013)
Nature
, vol.493
, pp. 699-702
-
-
Bieniossek, C.1
Papai, G.2
Schaffitzel, C.3
Garzoni, F.4
Chaillet, M.5
Scheer, E.6
-
25
-
-
0030669466
-
The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila
-
PMID:9367984
-
Burke TW, Kadonaga JT. The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila. Genes Dev 1997; 11:3020-31; PMID:9367984; http://dx.doi.org/10.1101/gad.11.22.3020
-
(1997)
Genes Dev
, vol.11
, pp. 3020-3031
-
-
Burke, T.W.1
Kadonaga, J.T.2
-
26
-
-
84872505828
-
Human TFIID binds to core promoter DNA in a reorganized structural state
-
PMID:23332750
-
Cianfrocco MA, Kassavetis GA, Grob P, Fang J, Juven-Gershon T, Kadonaga JT, et al. Human TFIID binds to core promoter DNA in a reorganized structural state. Cell 2013; 152:120-31; PMID:23332750; http://dx.doi.org/10.1016/j.cell.2012.12.005
-
(2013)
Cell
, vol.152
, pp. 120-131
-
-
Cianfrocco, M.A.1
Kassavetis, G.A.2
Grob, P.3
Fang, J.4
Juven-Gershon, T.5
Kadonaga, J.T.6
-
27
-
-
0037115591
-
The NC2 alpha and beta subunits play different roles in vivo
-
PMID:12502746
-
Creton S, Svejstrup JQ, Collart MA. The NC2 alpha and beta subunits play different roles in vivo. Genes Dev 2002; 16:3265-76; PMID:12502746; http://dx.doi.org/10.1101/gad.234002
-
(2002)
Genes Dev
, vol.16
, pp. 3265-3276
-
-
Creton, S.1
Svejstrup, J.Q.2
Collart, M.A.3
-
28
-
-
84873036600
-
The promiscuous life of plant NUCLEAR FACTOR Y transcription factors
-
PMID:23275578
-
Petroni K, Kumimoto RW, Gnesutta N, Calvenzani V, Fornari M, Tonelli C, et al. The promiscuous life of plant NUCLEAR FACTOR Y transcription factors. Plant Cell 2012; 24:4777-92; PMID:23275578; http://dx.doi.org/10.1105/tpc.112.105734
-
(2012)
Plant Cell
, vol.24
, pp. 4777-4792
-
-
Petroni, K.1
Kumimoto, R.W.2
Gnesutta, N.3
Calvenzani, V.4
Fornari, M.5
Tonelli, C.6
-
29
-
-
80054033461
-
A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles
-
M111.013284
-
Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, et al. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. Mol Cell Proteomics 2011; 10:M111.013284.
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Wagner, S.A.1
Beli, P.2
Weinert, B.T.3
Nielsen, M.L.4
Cox, J.5
Mann, M.6
-
30
-
-
78650238493
-
The ACF1 complex is required for DNA double-strand break repair in human cells
-
PMID:21172662
-
Lan L, Ui A, Nakajima S, Hatakeyama K, Hoshi M, Watanabe R, et al. The ACF1 complex is required for DNA double-strand break repair in human cells. Mol Cell 2010; 40:976-87; PMID:21172662; http://dx.doi.org/10.1016/j.molcel.2010.12.003
-
(2010)
Mol Cell
, vol.40
, pp. 976-987
-
-
Lan, L.1
Ui, A.2
Nakajima, S.3
Hatakeyama, K.4
Hoshi, M.5
Watanabe, R.6
-
31
-
-
59849090498
-
TAF12 recruits Gadd45a and the nucleotide excision repair complex to the promoter of rRNA genes leading to active DNA demethylation
-
PMID:19217408
-
Schmitz KM, Schmitt N, Hoffmann-Rohrer U, Schäfer A, Grummt I, Mayer C. TAF12 recruits Gadd45a and the nucleotide excision repair complex to the promoter of rRNA genes leading to active DNA demethylation. Mol Cell 2009; 33:344-53; PMID:19217408; http://dx.doi.org/10.1016/j.molcel.2009.01.015
-
(2009)
Mol Cell
, vol.33
, pp. 344-353
-
-
Schmitz, K.M.1
Schmitt, N.2
Hoffmann-Rohrer, U.3
Schäfer, A.4
Grummt, I.5
Mayer, C.6
-
32
-
-
79953759105
-
Sensing of replication stress and Mec1 activation act through two independent pathways involving the 9-1-1 complex and DNA polymerase ε
-
PMID:21436894
-
Puddu F, Piergiovanni G, Plevani P, Muzi-Falconi M. Sensing of replication stress and Mec1 activation act through two independent pathways involving the 9-1-1 complex and DNA polymerase ε. PLoS Genet 2011; 7:e1002022; PMID:21436894; http://dx.doi.org/10.1371/journal.pgen.1002022
-
(2011)
PLoS Genet
, vol.7
-
-
Puddu, F.1
Piergiovanni, G.2
Plevani, P.3
Muzi-Falconi, M.4
|