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Volumn 8, Issue 5, 2013, Pages

Interactions between the R2R3-MYB Transcription Factor, AtMYB61, and Target DNA Binding Sites

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE; BACTERIAL PROTEIN; CYTOSINE; PROTEIN ATMYB61; PROTEIN MYB; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR R2R3 MYB; UNCLASSIFIED DRUG;

EID: 84878572579     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0065132     Document Type: Article
Times cited : (36)

References (54)
  • 1
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome I, (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
    • Arabidopsis Genome, I.1
  • 3
    • 0031081131 scopus 로고    scopus 로고
    • MYB transcription factors in plants
    • Martin C, PazAres J, (1997) MYB transcription factors in plants. Trends in Genetics 13: 67-73.
    • (1997) Trends in Genetics , vol.13 , pp. 67-73
    • Martin, C.1    PazAres, J.2
  • 4
    • 0034671865 scopus 로고    scopus 로고
    • Arabidopsis transcription factors: Genome-wide comparative analysis among eukaryotes
    • Riechmann JL, Heard J, Martin G, Reuber L, Jiang CZ, et al. (2000) Arabidopsis transcription factors: Genome-wide comparative analysis among eukaryotes. Science 290: 2105-2110.
    • (2000) Science , vol.290 , pp. 2105-2110
    • Riechmann, J.L.1    Heard, J.2    Martin, G.3    Reuber, L.4    Jiang, C.Z.5
  • 6
    • 84879488394 scopus 로고    scopus 로고
    • Transcriptome-wide identification of R2R3-MYB transcription factors in barley with their boron responsive expression analysis
    • Tombuloglu H, Kekec G, Sakcali MS, Unver T, (2013) Transcriptome-wide identification of R2R3-MYB transcription factors in barley with their boron responsive expression analysis. Mol Genet Genomics 288: 141-155.
    • (2013) Mol Genet Genomics , vol.288 , pp. 141-155
    • Tombuloglu, H.1    Kekec, G.2    Sakcali, M.S.3    Unver, T.4
  • 7
    • 0031964050 scopus 로고    scopus 로고
    • Molecular evolution of the Myb family of transcription factors: Evidence for polyphyletic origin
    • Rosinski JA, Atchley WR, (1998) Molecular evolution of the Myb family of transcription factors: Evidence for polyphyletic origin. Journal of Molecular Evolution 46: 74-83.
    • (1998) Journal of Molecular Evolution , vol.46 , pp. 74-83
    • Rosinski, J.A.1    Atchley, W.R.2
  • 8
    • 4143088144 scopus 로고    scopus 로고
    • Functional interactions between a glutamine synthetase promoter and MYB proteins
    • Gomez-Maldonado J, Avila C, de la Torre F, Canas R, Canovas FM, et al. (2004) Functional interactions between a glutamine synthetase promoter and MYB proteins. Plant Journal 39: 513-526.
    • (2004) Plant Journal , vol.39 , pp. 513-526
    • Gomez-Maldonado, J.1    Avila, C.2    de la Torre, F.3    Canas, R.4    Canovas, F.M.5
  • 9
    • 0031713237 scopus 로고    scopus 로고
    • Development of several epidermal cell types can be specified by the same MYB-related plant transcription factor
    • Glover BJ, Perez-Rodriguez M, Martin C, (1998) Development of several epidermal cell types can be specified by the same MYB-related plant transcription factor. Development 125: 3497-3508.
    • (1998) Development , vol.125 , pp. 3497-3508
    • Glover, B.J.1    Perez-Rodriguez, M.2    Martin, C.3
  • 10
    • 0033227377 scopus 로고    scopus 로고
    • Multifunctionality and diversity within the plant MYB-gene family
    • Jin HL, Martin C, (1999) Multifunctionality and diversity within the plant MYB-gene family. Plant Molecular Biology 41: 577-585.
    • (1999) Plant Molecular Biology , vol.41 , pp. 577-585
    • Jin, H.L.1    Martin, C.2
  • 11
    • 0029831579 scopus 로고    scopus 로고
    • One billion years of Myb
    • Lipsick JS, (1996) One billion years of Myb. Oncogene 13: 223-235.
    • (1996) Oncogene , vol.13 , pp. 223-235
    • Lipsick, J.S.1
  • 13
    • 21844443585 scopus 로고    scopus 로고
    • AtMYB61, an R2R3-MYB transcription factor controlling stomatal aperture in Arabidopsis thaliana
    • Liang YK, Dubos C, Dodd IC, Holroyd GH, Hetherington AM, et al. (2005) AtMYB61, an R2R3-MYB transcription factor controlling stomatal aperture in Arabidopsis thaliana. Current Biology 15: 1201-1206.
    • (2005) Current Biology , vol.15 , pp. 1201-1206
    • Liang, Y.K.1    Dubos, C.2    Dodd, I.C.3    Holroyd, G.H.4    Hetherington, A.M.5
  • 14
    • 1642523648 scopus 로고    scopus 로고
    • Involvement of the R2R3-MYB, AtMYB61, in the ectopic lignification and dark-photomorphogenic components of the det3 mutant phenotype
    • Newman LJ, Perazza DE, Juda L, Campbell MM, (2004) Involvement of the R2R3-MYB, AtMYB61, in the ectopic lignification and dark-photomorphogenic components of the det3 mutant phenotype. Plant Journal 37: 239-250.
    • (2004) Plant Journal , vol.37 , pp. 239-250
    • Newman, L.J.1    Perazza, D.E.2    Juda, L.3    Campbell, M.M.4
  • 18
    • 0029311264 scopus 로고
    • 2 Classes of cis sequences contribute to tissue-specific expression of a PAL2 promtoer in transgenic tobacco
    • Hatton D, Sablowski R, Yung MH, Smith C, Schuch W, et al. (1995) 2 Classes of cis sequences contribute to tissue-specific expression of a PAL2 promtoer in transgenic tobacco. Plant Journal 7: 859-876.
    • (1995) Plant Journal , vol.7 , pp. 859-876
    • Hatton, D.1    Sablowski, R.2    Yung, M.H.3    Smith, C.4    Schuch, W.5
  • 19
    • 0031105968 scopus 로고    scopus 로고
    • Cinnamate-4-hydroxylase expression in Arabidopsis - Regulation in response to development and the environment
    • BellLelong DA, Cusumano JC, Meyer K, Chapple C, (1997) Cinnamate-4-hydroxylase expression in Arabidopsis- Regulation in response to development and the environment. Plant Physiology 113: 729-738.
    • (1997) Plant Physiology , vol.113 , pp. 729-738
    • BellLelong, D.A.1    Cusumano, J.C.2    Meyer, K.3    Chapple, C.4
  • 20
    • 0027648774 scopus 로고
    • Combinatorial interactions between positive and negative cis-acting elements control spatial patterns of 4CL-1 expression in transgenic tobacco Plant Journal
    • Hauffe KD, Lee SP, Subramaniam R, Douglas CJ, (1993) Combinatorial interactions between positive and negative cis-acting elements control spatial patterns of 4CL-1 expression in transgenic tobacco Plant Journal. 4: 235-253.
    • (1993) , vol.4 , pp. 235-253
    • Hauffe, K.D.1    Lee, S.P.2    Subramaniam, R.3    Douglas, C.J.4
  • 21
    • 0026543902 scopus 로고
    • Phenylalanine ammonia-lyase in potato (Solanum-tuberosum L) - genomic complexity, structural comparison of 2 selected genes and modes of expression European Journal of Biochemistry
    • Joos HJ, Hahlbrock K, (1992) Phenylalanine ammonia-lyase in potato (Solanum-tuberosum L)- genomic complexity, structural comparison of 2 selected genes and modes of expression European Journal of Biochemistry. 204: 621-629.
    • (1992) , vol.204 , pp. 621-629
    • Joos, H.J.1    Hahlbrock, K.2
  • 22
    • 0033832317 scopus 로고    scopus 로고
    • Characterization of cis-elements required for vascular expression of the Cinnamoyl CoA Reductase gene and for protein-DNA complex formation
    • Lacombe E, Van Doorsselaere J, Boerjan W, Boudet AM, Grima-Pettenati J, (2000) Characterization of cis-elements required for vascular expression of the Cinnamoyl CoA Reductase gene and for protein-DNA complex formation. Plant Journal 23: 663-676.
    • (2000) Plant Journal , vol.23 , pp. 663-676
    • Lacombe, E.1    Van Doorsselaere, J.2    Boerjan, W.3    Boudet, A.M.4    Grima-Pettenati, J.5
  • 23
    • 0036792416 scopus 로고    scopus 로고
    • The vascular expression pattern directed by the Eucalyptus gunnii cinnamyl alcohol dehydrogenase EgCAD2 promoter is conserved among woody and herbaceous plant species
    • Lauvergeat V, Rech P, Jauneau A, Guez C, Coutos-Thevenot P, et al. (2002) The vascular expression pattern directed by the Eucalyptus gunnii cinnamyl alcohol dehydrogenase EgCAD2 promoter is conserved among woody and herbaceous plant species. Plant Molecular Biology 50: 497-509.
    • (2002) Plant Molecular Biology , vol.50 , pp. 497-509
    • Lauvergeat, V.1    Rech, P.2    Jauneau, A.3    Guez, C.4    Coutos-Thevenot, P.5
  • 24
    • 0026829338 scopus 로고
    • Cis-element combinations determine phenylalanine ammonia-lyase gene tissue-specific expression patterns
    • Leyva A, Liang XW, Pintortoro JA, Dixon RA, Lamb CJ, (1992) Cis-element combinations determine phenylalanine ammonia-lyase gene tissue-specific expression patterns. Plant Cell 4: 263-271.
    • (1992) Plant Cell , vol.4 , pp. 263-271
    • Leyva, A.1    Liang, X.W.2    Pintortoro, J.A.3    Dixon, R.A.4    Lamb, C.J.5
  • 26
    • 0345403931 scopus 로고
    • A phenylalanine ammonia-lyase gene from parsley - structure, regulation and identification of elicitor and light responsive cis-acting elements
    • Lois R, Dietrich A, Hahlbrock K, Schulz W, (1989) A phenylalanine ammonia-lyase gene from parsley- structure, regulation and identification of elicitor and light responsive cis-acting elements. Embo Journal 8: 1641-1648.
    • (1989) Embo Journal , vol.8 , pp. 1641-1648
    • Lois, R.1    Dietrich, A.2    Hahlbrock, K.3    Schulz, W.4
  • 27
    • 0031260204 scopus 로고    scopus 로고
    • Characterization of a gene encoding a DNA-binding protein that interacts in vitro with vascular specific cis elements of the phenylalanine ammonia-lyase promoter
    • Seguin A, Laible G, Leyva A, Dixon RA, Lamb CJ, (1997) Characterization of a gene encoding a DNA-binding protein that interacts in vitro with vascular specific cis elements of the phenylalanine ammonia-lyase promoter. Plant Molecular Biology 35: 281-291.
    • (1997) Plant Molecular Biology , vol.35 , pp. 281-291
    • Seguin, A.1    Laible, G.2    Leyva, A.3    Dixon, R.A.4    Lamb, C.J.5
  • 28
    • 0034669209 scopus 로고    scopus 로고
    • Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis
    • Jin HL, Cominelli E, Bailey P, Parr A, Mehrtens F, et al. (2000) Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis. Embo Journal 19: 6150-6161.
    • (2000) Embo Journal , vol.19 , pp. 6150-6161
    • Jin, H.L.1    Cominelli, E.2    Bailey, P.3    Parr, A.4    Mehrtens, F.5
  • 30
    • 0028964702 scopus 로고
    • Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb
    • Ogata K, Morikawa S, Nakamura H, Hojo H, Yoshimura S, et al. (1995) Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nature Structural Biology 2: 309-320.
    • (1995) Nature Structural Biology , vol.2 , pp. 309-320
    • Ogata, K.1    Morikawa, S.2    Nakamura, H.3    Hojo, H.4    Yoshimura, S.5
  • 31
    • 0028138773 scopus 로고
    • Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices
    • Ogata K, Morikawa S, Nakamura H, Sekikawa A, Inoue T, et al. (1994) Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices. Cell 79: 639-648.
    • (1994) Cell , vol.79 , pp. 639-648
    • Ogata, K.1    Morikawa, S.2    Nakamura, H.3    Sekikawa, A.4    Inoue, T.5
  • 32
    • 0034766499 scopus 로고    scopus 로고
    • Crystals of ternary protein-DNA complexes composed of DNA-binding domains of c-Myb or v-Myb, C/EBP alpha or C/EBP beta and tom-1A promoter fragment
    • Tahirov TH, Sasaki M, Inoue-Bungo T, Fujikawa A, Sato K, et al. (2001) Crystals of ternary protein-DNA complexes composed of DNA-binding domains of c-Myb or v-Myb, C/EBP alpha or C/EBP beta and tom-1A promoter fragment. Acta Crystallographica Section D-Biological Crystallography 57: 1655-1658.
    • (2001) Acta Crystallographica Section D-Biological Crystallography , vol.57 , pp. 1655-1658
    • Tahirov, T.H.1    Sasaki, M.2    Inoue-Bungo, T.3    Fujikawa, A.4    Sato, K.5
  • 33
    • 18244394860 scopus 로고    scopus 로고
    • Mechanism of c-Myb-C/EBP beta cooperation from separated sites on a promoter
    • Tahirov TH, Sato K, Ichikawa-Iwata E, Sasaki M, Inoue-Bungo T, et al. (2002) Mechanism of c-Myb-C/EBP beta cooperation from separated sites on a promoter. Cell 108: 57-70.
    • (2002) Cell , vol.108 , pp. 57-70
    • Tahirov, T.H.1    Sato, K.2    Ichikawa-Iwata, E.3    Sasaki, M.4    Inoue-Bungo, T.5
  • 34
    • 84864549155 scopus 로고    scopus 로고
    • AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network
    • Romano JM, Dubos C, Prouse MB, Wilkins O, Hong H, et al. (2012) AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network. New Phytologist 195: 774-786.
    • (2012) New Phytologist , vol.195 , pp. 774-786
    • Romano, J.M.1    Dubos, C.2    Prouse, M.B.3    Wilkins, O.4    Hong, H.5
  • 35
    • 27644530140 scopus 로고    scopus 로고
    • Kanamycin reveals the role played by glutamate receptors in shaping plant resource allocation
    • Dubos C, Willment J, Huggins D, Grant GH, Campbell MM, (2005) Kanamycin reveals the role played by glutamate receptors in shaping plant resource allocation. Plant Journal 43: 348-355.
    • (2005) Plant Journal , vol.43 , pp. 348-355
    • Dubos, C.1    Willment, J.2    Huggins, D.3    Grant, G.H.4    Campbell, M.M.5
  • 36
    • 0035542785 scopus 로고    scopus 로고
    • MYB61 is required for mucilage deposition and extrusion in the Arabidopsis seed coat
    • Penfield S, Meissner RC, Shoue DA, Carpita NC, Bevan MW, (2001) MYB61 is required for mucilage deposition and extrusion in the Arabidopsis seed coat. Plant Cell 13: 2777-2791.
    • (2001) Plant Cell , vol.13 , pp. 2777-2791
    • Penfield, S.1    Meissner, R.C.2    Shoue, D.A.3    Carpita, N.C.4    Bevan, M.W.5
  • 37
    • 0025822948 scopus 로고
    • Cyclic amplification and selection of targets (CASTing) for the myogenin consensus binding site
    • Wright WE, Binder M, Funk W, (1991) Cyclic amplification and selection of targets (CASTing) for the myogenin consensus binding site. Molecular and Cellular Biology 11: 4104-4110.
    • (1991) Molecular and Cellular Biology , vol.11 , pp. 4104-4110
    • Wright, W.E.1    Binder, M.2    Funk, W.3
  • 38
  • 40
    • 0032623267 scopus 로고    scopus 로고
    • Nitrocellulose Filter Binding for Determination of Dissociation Constants
    • Hall KB, and Kranz J.K. (2008) Nitrocellulose Filter Binding for Determination of Dissociation Constants. In RNA Protein Interaction Protocols Humana Press: 105-114.
    • (2008) RNA Protein Interaction Protocols Humana Press , pp. 105-114
    • Hall, K.B.1    Kranz, J.K.2
  • 41
    • 32144456009 scopus 로고    scopus 로고
    • Paircoil2: improved prediction of coiled coils from sequence
    • McDonnell AV, Jiang T, Keating AE, Berger B, (2006) Paircoil2: improved prediction of coiled coils from sequence. Bioinformatics 22: 356-358.
    • (2006) Bioinformatics , vol.22 , pp. 356-358
    • McDonnell, A.V.1    Jiang, T.2    Keating, A.E.3    Berger, B.4
  • 42
    • 0033824470 scopus 로고    scopus 로고
    • DaliLite workbench for protein structure comparison
    • Holm L, Park J, (2000) DaliLite workbench for protein structure comparison. Bioinformatics 16: 566-567.
    • (2000) Bioinformatics , vol.16 , pp. 566-567
    • Holm, L.1    Park, J.2
  • 45
    • 27144549989 scopus 로고    scopus 로고
    • EgMYB2, a new transcriptional activator from Eucalyptus xylem, regulates secondary cell wall formation and lignin biosynthesis
    • Goicoechea M, Lacombe E, Legay S, Mihaljevic S, Rech P, et al. (2005) EgMYB2, a new transcriptional activator from Eucalyptus xylem, regulates secondary cell wall formation and lignin biosynthesis. Plant Journal 43: 553-567.
    • (2005) Plant Journal , vol.43 , pp. 553-567
    • Goicoechea, M.1    Lacombe, E.2    Legay, S.3    Mihaljevic, S.4    Rech, P.5
  • 46
    • 0028670510 scopus 로고
    • Biophysical characterization of the c-Myb DNA-binding domain
    • Ebneth A, Schweers O, Thole H, Fagin U, Urbanke C, et al. (1994) Biophysical characterization of the c-Myb DNA-binding domain. Biochemistry 33: 14586-14593.
    • (1994) Biochemistry , vol.33 , pp. 14586-14593
    • Ebneth, A.1    Schweers, O.2    Thole, H.3    Fagin, U.4    Urbanke, C.5
  • 49
    • 0032580207 scopus 로고    scopus 로고
    • Allosteric effects of DNA on transcriptional regulators
    • Lefstin JA, Yamamoto KR, (1998) Allosteric effects of DNA on transcriptional regulators. Nature 392: 885-888.
    • (1998) Nature , vol.392 , pp. 885-888
    • Lefstin, J.A.1    Yamamoto, K.R.2
  • 50
    • 48749124117 scopus 로고    scopus 로고
    • ChIPping away at gene regulation
    • Massie CE, Mills IG, (2008) ChIPping away at gene regulation. Embo Reports 9: 337-343.
    • (2008) Embo Reports , vol.9 , pp. 337-343
    • Massie, C.E.1    Mills, I.G.2
  • 51
    • 77950519937 scopus 로고    scopus 로고
    • Origins of Specificity in Protein-DNA Recognition
    • In: Kornberg RD, Raetz CRH, Rothman JE, Thorner JW, editors Palo Alto: Annual Reviews
    • Rohs R, Jin XS, West SM, Joshi R, Honig B,et al. (2010) Origins of Specificity in Protein-DNA Recognition. In: Kornberg RD, Raetz CRH, Rothman JE, Thorner JW, editors. Annual Review of Biochemistry, Vol 79. Palo Alto: Annual Reviews. 233-269.
    • (2010) Annual Review of Biochemistry , vol.79 , pp. 233-269
    • Rohs, R.1    Jin, X.S.2    West, S.M.3    Joshi, R.4    Honig, B.5
  • 52
    • 79960327383 scopus 로고    scopus 로고
    • In vitro DNA-binding profile of transcription factors: methods and new insights
    • Wang J, Lu J, Gu G, Liu Y, (2011) In vitro DNA-binding profile of transcription factors: methods and new insights. Journal of Endocrinology 210: 15-27.
    • (2011) Journal of Endocrinology , vol.210 , pp. 15-27
    • Wang, J.1    Lu, J.2    Gu, G.3    Liu, Y.4
  • 53
    • 65249167505 scopus 로고    scopus 로고
    • DNA Binding Site Sequence Directs Glucocorticoid Receptor Structure and Activity
    • Meijsing SH, Pufall MA, So AY, Bates DL, Chen L, et al. (2009) DNA Binding Site Sequence Directs Glucocorticoid Receptor Structure and Activity. Science 324: 407-410.
    • (2009) Science , vol.324 , pp. 407-410
    • Meijsing, S.H.1    Pufall, M.A.2    So, A.Y.3    Bates, D.L.4    Chen, L.5
  • 54
    • 22044437388 scopus 로고    scopus 로고
    • The Botany Array Resource: e-Northerns, Expression Angling, and Promoter analyses
    • Toufighi K, Brady SM, Austin R, Ly E, Provart NJ, (2005) The Botany Array Resource: e-Northerns, Expression Angling, and Promoter analyses. Plant Journal 43: 153-163.
    • (2005) Plant Journal , vol.43 , pp. 153-163
    • Toufighi, K.1    Brady, S.M.2    Austin, R.3    Ly, E.4    Provart, N.J.5


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