메뉴 건너뛰기




Volumn 117, Issue 5, 2013, Pages 329-347

Characterization of Phytophthora hybrids from ITS clade 6 associated with riparian ecosystems in South Africa and Australia

Author keywords

CoxI; Evolution; Interspecific hybridization; Phylogeny; Recombination

Indexed keywords

MITOCHONDRIAL DNA; SPACER DNA;

EID: 84878507687     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2013.03.004     Document Type: Article
Times cited : (62)

References (65)
  • 1
    • 78649501394 scopus 로고    scopus 로고
    • Meiotic versus mitotic recombination: two different routes for double-strand break repair
    • Andersen S.L., Sekelsky J. Meiotic versus mitotic recombination: two different routes for double-strand break repair. BioEssays 2010, 32:1058-1066.
    • (2010) BioEssays , vol.32 , pp. 1058-1066
    • Andersen, S.L.1    Sekelsky, J.2
  • 3
    • 0034636485 scopus 로고    scopus 로고
    • The rise of the hybrid fungi
    • Brasier C. The rise of the hybrid fungi. Nature 2000, 405:134-135.
    • (2000) Nature , vol.405 , pp. 134-135
    • Brasier, C.1
  • 4
    • 77955016561 scopus 로고    scopus 로고
    • Phytophthora biodiversity: how many Phytophthora species are there?
    • Monterey, California
    • Brasier C, 2009. Phytophthora biodiversity: how many Phytophthora species are there? In: Phytophthoras in Forests and Natural Ecosystems, Monterey, California, p.101.
    • (2009) Phytophthoras in Forests and Natural Ecosystems , pp. 101
    • Brasier, C.1
  • 6
    • 0038075386 scopus 로고    scopus 로고
    • Multiple new phenotypic taxa from trees and riparian ecosystems in Phytophthora gonapodyides-P. megasperma ITS clade 6, which tend to be high-temperature tolerant and either inbreeding or sterile
    • Brasier C.M., Cooke D.E.L., Duncan J.M., Hansen E.M. Multiple new phenotypic taxa from trees and riparian ecosystems in Phytophthora gonapodyides-P. megasperma ITS clade 6, which tend to be high-temperature tolerant and either inbreeding or sterile. Mycological Research 2003, 107:277-290.
    • (2003) Mycological Research , vol.107 , pp. 277-290
    • Brasier, C.M.1    Cooke, D.E.L.2    Duncan, J.M.3    Hansen, E.M.4
  • 7
    • 0000757399 scopus 로고
    • Cultural characters, protein patterns and unusual mating behaviour of Phytophthora gonapodyides isolates from Britain and North America
    • Brasier C.M., Hamm P.B., Hansen E.M. Cultural characters, protein patterns and unusual mating behaviour of Phytophthora gonapodyides isolates from Britain and North America. Mycological Research 1993, 97:1287-1298.
    • (1993) Mycological Research , vol.97 , pp. 1287-1298
    • Brasier, C.M.1    Hamm, P.B.2    Hansen, E.M.3
  • 8
    • 6344220063 scopus 로고    scopus 로고
    • Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees
    • Brasier C.M., Kirk S.A., Delcan J., Cooke D.E.L., Jung T., Man In't Veld W.A. Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees. Mycological Research 2004, 108:1172-1184.
    • (2004) Mycological Research , vol.108 , pp. 1172-1184
    • Brasier, C.M.1    Kirk, S.A.2    Delcan, J.3    Cooke, D.E.L.4    Jung, T.5    Man In't Veld, W.A.6
  • 9
    • 0028994556 scopus 로고
    • An unusual Phytophthora associated with widespread alder mortality in Britain
    • Brasier C.M., Rose J., Gibbs J.N. An unusual Phytophthora associated with widespread alder mortality in Britain. Plant Pathology 1995, 44:999-1007.
    • (1995) Plant Pathology , vol.44 , pp. 999-1007
    • Brasier, C.M.1    Rose, J.2    Gibbs, J.N.3
  • 10
    • 0038283182 scopus 로고    scopus 로고
    • Phytophthora inundata sp. nov., a part heterothallic pathogen of trees and shrubs in wet or flooded soils
    • Brasier C.M., Sanchez-Hernandez E., Kirk S.A. Phytophthora inundata sp. nov., a part heterothallic pathogen of trees and shrubs in wet or flooded soils. Mycological Research 2003, 107:477-484.
    • (2003) Mycological Research , vol.107 , pp. 477-484
    • Brasier, C.M.1    Sanchez-Hernandez, E.2    Kirk, S.A.3
  • 13
    • 33644674439 scopus 로고    scopus 로고
    • The organization and inheritance of the mitochondrial genome
    • Chen X.J., Butow R.A. The organization and inheritance of the mitochondrial genome. Nature Reviews Genetics 2005, 6:815-825.
    • (2005) Nature Reviews Genetics , vol.6 , pp. 815-825
    • Chen, X.J.1    Butow, R.A.2
  • 16
    • 27644479823 scopus 로고    scopus 로고
    • The 'asparagus' Phytophthora infecting members of the Agavaceae at the Royal Botanic Gardens, Melbourne
    • Cunnington J.H., De Alwis S., Pascoe I.G., Symes P. The 'asparagus' Phytophthora infecting members of the Agavaceae at the Royal Botanic Gardens, Melbourne. Australasian Plant Pathology 2005, 34:413-414.
    • (2005) Australasian Plant Pathology , vol.34 , pp. 413-414
    • Cunnington, J.H.1    De Alwis, S.2    Pascoe, I.G.3    Symes, P.4
  • 17
    • 0036346161 scopus 로고    scopus 로고
    • Non-Mendelian inheritance revealed in a genetic analysis of sexual progeny of Phytophthora cinnamomi with microsatellite markers
    • Dobrowolski M.P., Tommerup I.C., Blakeman H.D., O'Brien P.A. Non-Mendelian inheritance revealed in a genetic analysis of sexual progeny of Phytophthora cinnamomi with microsatellite markers. Fungal Genetics and Biology 2002, 35:197-212.
    • (2002) Fungal Genetics and Biology , vol.35 , pp. 197-212
    • Dobrowolski, M.P.1    Tommerup, I.C.2    Blakeman, H.D.3    O'Brien, P.A.4
  • 20
    • 0029188433 scopus 로고
    • Creation of species hybrids of Phytophthora with modified host ranges by zoospore fusion
    • Ersek T., English J.T., Schoelz J.E. Creation of species hybrids of Phytophthora with modified host ranges by zoospore fusion. Phytopathology 1995, 85:1343-1347.
    • (1995) Phytopathology , vol.85 , pp. 1343-1347
    • Ersek, T.1    English, J.T.2    Schoelz, J.E.3
  • 22
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 23
    • 0025639944 scopus 로고
    • Mating behavior of Phytophthora parasitica: evidence for sexual recombination in oospores using DNA restriction fragment length polymorphisms as genetic markers
    • Förster H., Coffey M.D. Mating behavior of Phytophthora parasitica: evidence for sexual recombination in oospores using DNA restriction fragment length polymorphisms as genetic markers. Experimental Mycology 1990, 14:351-359.
    • (1990) Experimental Mycology , vol.14 , pp. 351-359
    • Förster, H.1    Coffey, M.D.2
  • 24
    • 0000885698 scopus 로고
    • Molecular taxonomy of Phytophthora megasperma based on mitochondrial and nuclear DNA polymorphisms
    • Förster H., Coffey M.D. Molecular taxonomy of Phytophthora megasperma based on mitochondrial and nuclear DNA polymorphisms. Mycological Research 1993, 97:1101-1112.
    • (1993) Mycological Research , vol.97 , pp. 1101-1112
    • Förster, H.1    Coffey, M.D.2
  • 25
    • 0000285959 scopus 로고
    • An integrated approach to the analysis of variation in Phytophthora nicotianae and a redescription of the species
    • Hall G. An integrated approach to the analysis of variation in Phytophthora nicotianae and a redescription of the species. Mycological Research 1993, 97:559-574.
    • (1993) Mycological Research , vol.97 , pp. 559-574
    • Hall, G.1
  • 27
    • 0033961827 scopus 로고    scopus 로고
    • Managing Port-Orford-cedar and the introduced pathogen Phytophthora lateralis
    • Hansen E.M., Goheen D.J., Jules E.S., Ullian B. Managing Port-Orford-cedar and the introduced pathogen Phytophthora lateralis. Plant Disease 2000, 84:4-14.
    • (2000) Plant Disease , vol.84 , pp. 4-14
    • Hansen, E.M.1    Goheen, D.J.2    Jules, E.S.3    Ullian, B.4
  • 30
    • 0034409183 scopus 로고    scopus 로고
    • False-negative isolations or absence of lesions may cause mis-diagnosis of diseased plants infected with Phytophthora cinnamomi
    • Hüberli D., Tommerup I.C., Hardy G.E.S.J. False-negative isolations or absence of lesions may cause mis-diagnosis of diseased plants infected with Phytophthora cinnamomi. Australasian Plant Pathology 2000, 29:164-169.
    • (2000) Australasian Plant Pathology , vol.29 , pp. 164-169
    • Hüberli, D.1    Tommerup, I.C.2    Hardy, G.E.S.J.3
  • 31
    • 67650892264 scopus 로고    scopus 로고
    • Molecular comparison of natural hybrids of Phytophthora nicotianae and P. cactorum infecting loquat trees in Peru and Taiwan
    • Hurtado-Gonzales O.P., Aragon-Caballero L.M., Flores-Torres J.G., Man W., Lamour K.H. Molecular comparison of natural hybrids of Phytophthora nicotianae and P. cactorum infecting loquat trees in Peru and Taiwan. Mycologia 2009, 101:496-502.
    • (2009) Mycologia , vol.101 , pp. 496-502
    • Hurtado-Gonzales, O.P.1    Aragon-Caballero, L.M.2    Flores-Torres, J.G.3    Man, W.4    Lamour, K.H.5
  • 32
    • 78751537495 scopus 로고    scopus 로고
    • Detecting Phytophthora ramorum and other species of Phytophthora in streams in natural ecosystems using baiting and filtration methods
    • Santa Rosa, California, S.J.K. Frankel, T. John, Palmieri, M. Katharine (Eds.)
    • Hwang J., Oak S.W., Jeffers S. Detecting Phytophthora ramorum and other species of Phytophthora in streams in natural ecosystems using baiting and filtration methods. Proceedings of the Sudden Oak Death Third Science Symposium 2008, Santa Rosa, California. S.J.K. Frankel, T. John, Palmieri, M. Katharine (Eds.).
    • (2008) Proceedings of the Sudden Oak Death Third Science Symposium
    • Hwang, J.1    Oak, S.W.2    Jeffers, S.3
  • 33
    • 33646753785 scopus 로고    scopus 로고
    • Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses
    • Ioos R., Andrieux A., Marçais B., Frey P. Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses. Fungal Genetics and Biology 2006, 43:511-529.
    • (2006) Fungal Genetics and Biology , vol.43 , pp. 511-529
    • Ioos, R.1    Andrieux, A.2    Marçais, B.3    Frey, P.4
  • 34
    • 11144348955 scopus 로고    scopus 로고
    • The spores of Phytophthora: weapons of the plant destroyer
    • Judelson H.S., Blanco F.A. The spores of Phytophthora: weapons of the plant destroyer. Nature Reviews Microbiology 2005, 3:47-58.
    • (2005) Nature Reviews Microbiology , vol.3 , pp. 47-58
    • Judelson, H.S.1    Blanco, F.A.2
  • 36
    • 79960611994 scopus 로고    scopus 로고
    • Multiple new Phytophthora species from ITS clade 6 associated with natural ecosystems in Australia: evolutionary and ecological implications
    • Jung T., Stukely M.J.C., Hardy G.E.S.J., White D., Paap T., Dunstan W.A., Burgess T.I. Multiple new Phytophthora species from ITS clade 6 associated with natural ecosystems in Australia: evolutionary and ecological implications. Persoonia 2011, 26:13-39.
    • (2011) Persoonia , vol.26 , pp. 13-39
    • Jung, T.1    Stukely, M.J.C.2    Hardy, G.E.S.J.3    White, D.4    Paap, T.5    Dunstan, W.A.6    Burgess, T.I.7
  • 37
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: improvement in accuracy of multiple sequence alignment
    • Katoh K., Kuma K., Toh H., Miyata T. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research 2005, 33:511.
    • (2005) Nucleic Acids Research , vol.33 , pp. 511
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 39
    • 33845620672 scopus 로고    scopus 로고
    • Natural hybrids of resident and introduced Phytophthora species proliferating on multiple new hosts
    • Man in't Veld W.A., de Cock A.W.A.M., Summerbell R.C. Natural hybrids of resident and introduced Phytophthora species proliferating on multiple new hosts. European Journal of Plant Pathology 2007, 117:25-33.
    • (2007) European Journal of Plant Pathology , vol.117 , pp. 25-33
    • Man in't Veld, W.A.1    de Cock, A.W.A.M.2    Summerbell, R.C.3
  • 40
    • 84871775260 scopus 로고    scopus 로고
    • Phytophthora X serendipita sp. nov. and P. X pelgrandis, two destructive pathogens generated by natural hybridization
    • Man in't Veld W.A., Rosendahl K.C.H.M., Hong C. Phytophthora X serendipita sp. nov. and P. X pelgrandis, two destructive pathogens generated by natural hybridization. Mycologia 2012, 104:1390-1396.
    • (2012) Mycologia , vol.104 , pp. 1390-1396
    • Man in't Veld, W.A.1    Rosendahl, K.C.H.M.2    Hong, C.3
  • 41
    • 0031679420 scopus 로고    scopus 로고
    • Natural hybrids of Phytophthora nicotianae and Phytophthora cactorum demonstrated by isozyme analysis and random amplified polymorphic DNA
    • Man in't Veld W.A., Veenbaas-Rijks W.J., Ilieva E., de Cock A.W.A.M., Bonants P.J.M., Pieters R. Natural hybrids of Phytophthora nicotianae and Phytophthora cactorum demonstrated by isozyme analysis and random amplified polymorphic DNA. Phytopathology 1998, 88:922-929.
    • (1998) Phytopathology , vol.88 , pp. 922-929
    • Man in't Veld, W.A.1    Veenbaas-Rijks, W.J.2    Ilieva, E.3    de Cock, A.W.A.M.4    Bonants, P.J.M.5    Pieters, R.6
  • 42
    • 84950610961 scopus 로고
    • Detection of Phytophthora cinnamomi in soils
    • Marks G.C., Kassaby F.Y. Detection of Phytophthora cinnamomi in soils. Australian Forestry 1974, 36:198-203.
    • (1974) Australian Forestry , vol.36 , pp. 198-203
    • Marks, G.C.1    Kassaby, F.Y.2
  • 43
    • 0037656232 scopus 로고    scopus 로고
    • Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes
    • Martin F.N., Tooley P.W. Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes. Mycologia 2003, 95:269-284.
    • (2003) Mycologia , vol.95 , pp. 269-284
    • Martin, F.N.1    Tooley, P.W.2
  • 44
    • 57749186418 scopus 로고    scopus 로고
    • Epigenetic, transposon and small RNA determinants of hybrid dysfunctions
    • Michalak P. Epigenetic, transposon and small RNA determinants of hybrid dysfunctions. Heredity 2008, 102:45-50.
    • (2008) Heredity , vol.102 , pp. 45-50
    • Michalak, P.1
  • 45
    • 0026495490 scopus 로고
    • A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissues
    • Möller E.M., Bahnweg G., Sandermann H., Geiger H.H. A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissues. Nucleic Acids Research 1992, 20:6115.
    • (1992) Nucleic Acids Research , vol.20 , pp. 6115
    • Möller, E.M.1    Bahnweg, G.2    Sandermann, H.3    Geiger, H.H.4
  • 47
    • 0037385149 scopus 로고    scopus 로고
    • Standard and Swedish variant types of the hybrid alder Phytophthora attacking alder in Hungary
    • Nagy Z.A., Bakonyi J., Ersek T. Standard and Swedish variant types of the hybrid alder Phytophthora attacking alder in Hungary. Pest Management Science 2003, 59:484-492.
    • (2003) Pest Management Science , vol.59 , pp. 484-492
    • Nagy, Z.A.1    Bakonyi, J.2    Ersek, T.3
  • 48
    • 65549162674 scopus 로고    scopus 로고
    • Phytophthora x pelgrandis, a new natural hybrid pathogenic to Pelargonium grandiflorum hort
    • Nirenberg H.I., Gerlach W.F., Grafenhan T. Phytophthora x pelgrandis, a new natural hybrid pathogenic to Pelargonium grandiflorum hort. Mycologia 2009, 101:220.
    • (2009) Mycologia , vol.101 , pp. 220
    • Nirenberg, H.I.1    Gerlach, W.F.2    Grafenhan, T.3
  • 52
    • 0035400605 scopus 로고    scopus 로고
    • Chromosomal rearrangements and speciation
    • Rieseberg L.H. Chromosomal rearrangements and speciation. Trends in Ecology & Evolution 2001, 16:351-358.
    • (2001) Trends in Ecology & Evolution , vol.16 , pp. 351-358
    • Rieseberg, L.H.1
  • 53
    • 0036185434 scopus 로고    scopus 로고
    • Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California
    • Rizzo D.M., Garbelotto M., Davidson J.M., Slaughter G.W., Koike S.T. Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California. Plant Disease 2002, 86:205-214.
    • (2002) Plant Disease , vol.86 , pp. 205-214
    • Rizzo, D.M.1    Garbelotto, M.2    Davidson, J.M.3    Slaughter, G.W.4    Koike, S.T.5
  • 54
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572.
    • (2003) Bioinformatics , vol.19 , pp. 1572
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 55
    • 78650254880 scopus 로고    scopus 로고
    • Endophytes as potential pathogens of the baobab species Adansonia gregorii: a focus on the Botryosphaeriaceae
    • Sakalidis M.L., Hardy G.E., Burgess T.I. Endophytes as potential pathogens of the baobab species Adansonia gregorii: a focus on the Botryosphaeriaceae. Fungal Ecology 2011, 4:1-14.
    • (2011) Fungal Ecology , vol.4 , pp. 1-14
    • Sakalidis, M.L.1    Hardy, G.E.2    Burgess, T.I.3
  • 56
    • 0029125662 scopus 로고
    • Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications for biogeography and concerted evolution
    • Sang T., Crawford D.J., Stuessy T.F. Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications for biogeography and concerted evolution. Proceedings of the National Academy of Sciences of the United States of America 1995, 92:6813.
    • (1995) Proceedings of the National Academy of Sciences of the United States of America , vol.92 , pp. 6813
    • Sang, T.1    Crawford, D.J.2    Stuessy, T.F.3
  • 57
    • 54249085950 scopus 로고    scopus 로고
    • Occurrence and characterization of a Phytophthora sp. pathogenic to asparagus (Asparagus officinalis) in Michigan
    • Saude C., Hurtado-Gonzales O.P., Lamour K.H., Hausbeck M.K. Occurrence and characterization of a Phytophthora sp. pathogenic to asparagus (Asparagus officinalis) in Michigan. Phytopathology 2008, 98:1075-1083.
    • (2008) Phytopathology , vol.98 , pp. 1075-1083
    • Saude, C.1    Hurtado-Gonzales, O.P.2    Lamour, K.H.3    Hausbeck, M.K.4
  • 58
    • 0036072469 scopus 로고    scopus 로고
    • Phytophthora disease of alder (Alnus glutinosa) in France: investigations between 1995 and 1999
    • Streito J., Legrand P.H., Tabary F., Villartay G. Phytophthora disease of alder (Alnus glutinosa) in France: investigations between 1995 and 1999. Forest Pathology 2002, 32:179-191.
    • (2002) Forest Pathology , vol.32 , pp. 179-191
    • Streito, J.1    Legrand, P.H.2    Tabary, F.3    Villartay, G.4
  • 59
    • 84892442865 scopus 로고    scopus 로고
    • New Phytophthoras in Western Australia's natural ecosystems
    • Stukely M.J.C. New Phytophthoras in Western Australia's natural ecosystems. Microbiology Australia 2012, 32:31-33.
    • (2012) Microbiology Australia , vol.32 , pp. 31-33
    • Stukely, M.J.C.1
  • 61
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems in the analysis of DNA sequences
    • Tavaré S. Some probabilistic and statistical problems in the analysis of DNA sequences. Lectures on Mathematics in the Life Sciences 1986, 17:57-86.
    • (1986) Lectures on Mathematics in the Life Sciences , vol.17 , pp. 57-86
    • Tavaré, S.1
  • 63
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Academic Press, San Diego, M. Innis, D. Gelfand, J. Snisky, T. White (Eds.)
    • White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: a guide to methods and applications 1990, 315-322. Academic Press, San Diego. M. Innis, D. Gelfand, J. Snisky, T. White (Eds.).
    • (1990) PCR Protocols: a guide to methods and applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 64
    • 0028055696 scopus 로고
    • Inheritance of mitochondrial DNA in Phytophthora infestans
    • Whittaker S.L., Assinder S.J., Shaw D.S. Inheritance of mitochondrial DNA in Phytophthora infestans. Mycological Research 1994, 98:569-575.
    • (1994) Mycological Research , vol.98 , pp. 569-575
    • Whittaker, S.L.1    Assinder, S.J.2    Shaw, D.S.3
  • 65
    • 1542777838 scopus 로고
    • Ethanol precipitation of DNA
    • Zeugin J.A., Hartley J.L. Ethanol precipitation of DNA. Focus 1985, 7:1-2.
    • (1985) Focus , vol.7 , pp. 1-2
    • Zeugin, J.A.1    Hartley, J.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.