-
1
-
-
0035166973
-
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
-
Apweiler R, Attwood TK, Bairoch A et al. (2001) The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res 29: 37-40.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 37-40
-
-
Apweiler, R.1
Attwood, T.K.2
Bairoch, A.3
-
2
-
-
40549120596
-
The RAST Server: rapid annotations using subsystems technology
-
Aziz RK, Bartels D, Best AA et al. (2008) The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9: 75.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
-
3
-
-
0037255072
-
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
-
Boeckmann B, Bairoch A, Apweiler R et al. (2003) The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res 31: 365-370.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 365-370
-
-
Boeckmann, B.1
Bairoch, A.2
Apweiler, R.3
-
4
-
-
34248399627
-
Biological activity in a heavily organohalogen-contaminated river sediment
-
Bunge M, Kähkönen M, Rämisch W et al. (2007) Biological activity in a heavily organohalogen-contaminated river sediment. Environ Sci Pollut Res 14: 3-10.
-
(2007)
Environ Sci Pollut Res
, vol.14
, pp. 3-10
-
-
Bunge, M.1
Kähkönen, M.2
Rämisch, W.3
-
5
-
-
51649117275
-
Enrichment of a dioxin-dehalogenating Dehalococcoides species in two-liquid phase cultures
-
Bunge M, Wagner A, Fischer M, Andreesen JR & Lechner U (2008) Enrichment of a dioxin-dehalogenating Dehalococcoides species in two-liquid phase cultures. Environ Microbiol 10: 2670-2683.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2670-2683
-
-
Bunge, M.1
Wagner, A.2
Fischer, M.3
Andreesen, J.R.4
Lechner, U.5
-
6
-
-
77950650668
-
Tetrachloroethene conversion to ethene by a Dehalococcoides-containing enrichment culture from Bitterfeld
-
Cichocka D, Nikolausz M, Haest PJ & Nijenhuis I (2010) Tetrachloroethene conversion to ethene by a Dehalococcoides-containing enrichment culture from Bitterfeld. FEMS Microbiol Ecol 72: 297-310.
-
(2010)
FEMS Microbiol Ecol
, vol.72
, pp. 297-310
-
-
Cichocka, D.1
Nikolausz, M.2
Haest, P.J.3
Nijenhuis, I.4
-
8
-
-
84875080705
-
Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases
-
Hug LA, Maphosa F, Leys D, Löffler FE, Smidt H, Edwards EA & Adrian L (2013) Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases. Philos Trans R Soc Lond B Biol Sci 368: 20120322.
-
(2013)
Philos Trans R Soc Lond B Biol Sci
, vol.368
, pp. 20120322
-
-
Hug, L.A.1
Maphosa, F.2
Leys, D.3
Löffler, F.E.4
Smidt, H.5
Edwards, E.A.6
Adrian, L.7
-
9
-
-
84870903837
-
Dehalogenation of diverse halogenated substrates by a highly enriched Dehalococcoides-containing culture derived from the contaminated mega-site in Bitterfeld
-
Kaufhold T, Schmidt M, Cichocka D, Nikolausz M & Nijenhuis I (2013) Dehalogenation of diverse halogenated substrates by a highly enriched Dehalococcoides-containing culture derived from the contaminated mega-site in Bitterfeld. FEMS Microbiol Ecol 83: 176-188.
-
(2013)
FEMS Microbiol Ecol
, vol.83
, pp. 176-188
-
-
Kaufhold, T.1
Schmidt, M.2
Cichocka, D.3
Nikolausz, M.4
Nijenhuis, I.5
-
10
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
-
Krogh A, Larsson B, von Heijne G & Sonnhammer EL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305: 567-580.
-
(2001)
J Mol Biol
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
von Heijne, G.3
Sonnhammer, E.L.4
-
11
-
-
27144500225
-
Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1
-
Kube M, Beck A, Zinder SH, Kuhl H, Reinhardt R & Adrian L (2005) Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1. Nat Biotechnol 23: 1269-1273.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 1269-1273
-
-
Kube, M.1
Beck, A.2
Zinder, S.H.3
Kuhl, H.4
Reinhardt, R.5
Adrian, L.6
-
12
-
-
0035890910
-
REPuter: the manifold applications of repeat analysis on a genomic scale
-
Kurtz S, Choudhuri JV, Ohlebusch E, Schleiermacher C, Stoye J & Giegerich R (2001) REPuter: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Res 29: 4633-4642.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4633-4642
-
-
Kurtz, S.1
Choudhuri, J.V.2
Ohlebusch, E.3
Schleiermacher, C.4
Stoye, J.5
Giegerich, R.6
-
13
-
-
84874041126
-
Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi
-
Löffler FE, Yan J, Ritalahti KM et al. (2013) Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi. Int J Syst Evol Microbiol 63: 625-635.
-
(2013)
Int J Syst Evol Microbiol
, vol.63
, pp. 625-635
-
-
Löffler, F.E.1
Yan, J.2
Ritalahti, K.M.3
-
14
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies M, Egholm M, Altman WE et al. (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
-
15
-
-
73649122427
-
Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides
-
McMurdie PJ, Behrens SF, Müller JA et al. (2009) Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides. PLoS Genet 5: e1000714.
-
(2009)
PLoS Genet
, vol.5
-
-
McMurdie, P.J.1
Behrens, S.F.2
Müller, J.A.3
-
16
-
-
79957817494
-
Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides
-
McMurdie PJ, Hug LA, Edwards EA, Holmes S & Spormann AM (2011) Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides. BMC Genomics 12: 287.
-
(2011)
BMC Genomics
, vol.12
, pp. 287
-
-
McMurdie, P.J.1
Hug, L.A.2
Edwards, E.A.3
Holmes, S.4
Spormann, A.M.5
-
17
-
-
0033635022
-
Artemis: sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA & Barrell B (2000) Artemis: sequence visualization and annotation. Bioinformatics 16: 944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
Barrell, B.7
-
19
-
-
19944426081
-
Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes
-
Seshadri R, Adrian L, Fouts DE et al. (2005) Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Science 307: 105-108.
-
(2005)
Science
, vol.307
, pp. 105-108
-
-
Seshadri, R.1
Adrian, L.2
Fouts, D.E.3
|