Automatic neonatal brain tissue segmentation with MRI

Progress in Biomedical Optics and Imaging - Proceedings of SPIE

Volumn 8669, Issue , 2013, Pages

  Srhoj Egekher, Vedran ^a   Benders, Manon J N L ^b   Viergever, Max A ^c   Išgum, Ivana ^c  

^a UNIVERSITY OF ZAGREB   (Croatia)

^b UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^c UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

Author keywords

Atlas based segmentation; Brain segmentation; Neonatal brain mri; Supervised classification

Indexed keywords

ATLAS-BASED SEGMENTATION; AUTOMATIC SEGMENTATIONS; BRAIN MRI; BRAIN SEGMENTATION; BRAIN TISSUE SEGMENTATIONS; K-NEAREST NEIGHBOR CLASSIFIERS (KNN); MODIFIED HAUSDORFF DISTANCES; SUPERVISED CLASSIFICATION;

CEREBROSPINAL FLUID; GEOMETRY; IMAGE PROCESSING; MAGNETIC RESONANCE IMAGING; MEDICAL IMAGING; TISSUE;

BRAIN;

EID: 84878335608     PISSN: 16057422     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1117/12.2006653     Document Type: Conference Paper

References (12)

1. Huppi, P. S., Warfield, S. K., Kikinis, R., Barnes, P. D., Zientara, G. P., Jolesz, F. A., Tsuji, M. K., and Volpe, J. J., \Quantitative magnetic resonance imaging of brain development in premature and mature newborns., " Annals of Neurology 43(2), 224{235 (1998).
2. Woodward, L. J., Anderson, P. J., Austin, N. C., Howard, K., and Inder, T. E., \Neonatal MRI to predict neurodevelopmental outcomes in preterm infants., " N Engl J Med 355(7), 685{694 (2006).
3. Xue, H., Srinivasan, L., Jiang, S., Rutherford, M., Edwards, A. D., Rueckert, D., and Hajnal, J. V., \Automatic segmentation and reconstruction of the cortex from neonatal MRI., " NeuroImage 38(3), 461{ 477 (2007).
4. Weisenfeld, N. I. and Warfield, S. K., \Automatic segmentation of newborn brain MRI., " NeuroImage 47(2), 564{572 (2009).
5. Cardoso, M. J., Melbourne, A., Kendall, G. S., Modat, M., Robertson, N. J., Marlow, N., and Ourselin, S., \AdaPT: An adaptive preterm segmentation algorithm for neonatal brain MRI., " NeuroImage 65(0), 97{108 (2013).
6. Prastawa, M., Gilmore, J. H., Lin, W., and Gerig, G., \Automatic segmentation of MR images of the developing newborn brain., " Medical Image Analysis 9(5), 457{466 (2005).
7. Shi, F., Fan, Y., Tang, S., Gilmore, J. H., Lin, W., and Shen, D., \Neonatal brain image segmentation in longitudinal MRI studies., " NeuroImage 49(1), 391{400 (2010).
8. Song, Z., Awate, S. P., Licht, D. J., and Gee, J. C., \Clinical neonatal brain MRI segmentation using adaptive nonparametric data models and intensity-based Markov priors., " in [MICCAI (1)], Ayache, N., Ourselin, S., and Maeder, A., eds., Lecture Notes in Computer Science 4791, 883{890, Springer (2007).
9. Anbeek, P., Vincken, K. L., Groenendaal, F., Koeman, A., van Osch, M. J. P., and van der Grond, J., \Probabilistic Brain Tissue Segmentation in Neonatal MR Imaging., " Pediatric Research 63(2), 158{63 (2008).
10. Gui, L., Lisowski, R., Faundez, T., Huppi, P. S., Lazeyras, F., and Kocher, M., \Morphology-driven au- tomatic segmentation of MR images of the neonatal brain., " Medical Image Analysis 16(8), 1565{1579 (2012).
11. Smith, S. M., \Fast robust automated brain extraction., " Human Brain Mapping 17(3), 143{155 (2002).
12. Klein, S., Staring, M., Murphy, K., Viergever, M. A., and Pluim, J. P. W., \elastix: a toolbox for intensity- based medical image registration., " IEEE Transactions on Medical Imaging 29(1), 196{205 (2010).