Isolation, genetic identification, and degradation characteristics of n-hexadecane degrading bacteria from tropical areas in Iran

Fresenius Environmental Bulletin

Volumn 22, Issue 4 B, 2013, Pages 1304-1312

  Samaei, Mohammad R ^a   Mortazavi, Seyed B ^a   Bakhshi, Bita ^a   Jafari, Ahmad Jonidi ^a  

^a TARBIAT MODARES UNIVERSITY   (Iran)

Author keywords

Bacteria; Hexadecane; Isolation; Polymerase chain reaction; Soil

Indexed keywords

BACTERIUM; BIODEGRADATION; BIOREMEDIATION; BIOTECHNOLOGY; CONCENTRATION (COMPOSITION); DIESEL; GENETIC ANALYSIS; GROUNDWATER POLLUTION; HYDROCARBON; MORPHOLOGY; PH; PHYLOGENETICS; POLLUTANT REMOVAL; SALINITY; SOIL REMEDIATION;

IRAN;

ACINETOBACTER; ACINETOBACTER RADIORESISTENS; BACTERIA (MICROORGANISMS); PSEUDOMONAS AERUGINOSA;

EID: 84878280241     PISSN: 10184619     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (41)

1. Hassanshahian M, Emtiazi G, Cappello S. (2012) Isolation and characterization of crude-oil-degrading bacteria from the Persian Gulf and the Caspian Sea. Marine Pollution Bulletin 64, 7-12.
2. Pepi M, Cesaro A, Liut G, Baldi E (2005) An antarctic psychrotrophic bacterium Halomonas sp. ANT-3b, growing on nhexadecane, produces a new emulsyfying glycolipid. FEMS Microbiology Ecology 53, 157-166.
3. Lu S, Wang H, Yao Z. (2006) Isolation and characterization of gasoline-degrading bacteria from gas station leaking-contaminated soils. Journal of Environmental Sciences 18, 969-912.
4. Sakai Y, Maeng JH, Tani Y, Kato N. (1994) Use of long-chain nalkanes by an isolate, Acinetobacer sp. M-1. Bioscience, Biotechnology and Biochemistry 58, 2128-2130.
5. Daisuke K, Fumihiko H, Etsuo Y, Toshiya O, Seon-Yong C, Motoki K. (2001) Biodegradation of Long-Chain n-Paraffins from Waste Oil of Car Engine by Acinetobacter sp. Journal of Bioscience and Bioengineering 91, 94-96.
6. Van Hamme D, Ward Owen P. (2001) Physical and metabolic interactions of Pseudomonas sp. strain JA5-B45 and Rhodococcus sp. strain F9-D79 during growth on crude oil and effect of a chemical surfactant on them. Appl Environ Microbiol 67, 4874-4879.
7. Engelhardt M, Dary K, Swannell R, Head I. (2001) Isolation and characterization of a novel hydrocarbon-degrading, Grampositive bacterium, isolated from intertidal beach sediment, and description of Planococcus alkanoclasticus sp. nov. Journal of Applied Microbiology 90, 237-247.
8. Wael S E, Mohamed K I, Mohamed A-S, Fawkia E-B, Naoya O, Hiroshi S, et al. (2003) Isolation and identification of a Novel strain of the genus Ochrobactrum with phenol-degrading activity. Journal of Bioscience and Bioengineering 96, 310-312.
9. Yuan YJ, Lu ZX, Wu N, Huang U, Lu FX, Bie XM. (2005) Isolation and preliminary characterization of a novel nicotinedegrading bacterium, Ochrobactrum intermedium DN2. International Biodeterioration & Biodegradation 56, 45-50.
10. van Beilen JB, Wubbolts MG, Witholt B. (2005) Genetics of nalkane oxidation by Pseudomonas oleovorans. Biodegradation 5, 161-174.
11. Gallego J L R, Loredo J, Llamas JF, Vazquez F, Sanchez J. (2001) Bioremediation of diesel-contaminated soils: Evaluation of potential in situ techniques by study of bacterial degradation. Biodegradation 12, 325-335.
12. Bouchez-Naitali M, Rakatozafy H, Marchai R, Leveau J-Y, Vandecasteele J-P. (1999) Diversity of bacterial strains degrading hexadecane in relation to the mode of substrate uptake. Journal of Applied Microbiology 86, 421-428.
13. Noordman WH, Wachter JHJ, de Boer GJ, Janssen DB. (2002) The enhancement by surfactants of hexadecane degradation by Pseudomonas aeruginosa varies with substrate availability. Journal of Biotechnology 94, 195-212.
14. Volke-Sepulveda TL, Gutierrez-Rojas M, Favela-Torres E. (2003) Biodegradation of hexadecane in liquid and solid-state fermentations by Aspergillus niger. Bioresource Technology 87, 81-86.
15. Wu J, Ju LK. (1998) Extracellular particles of polymeric material formed in n-hexadecane fermentation by Pseudomonas aeruginosa. Journal of Biotechnology 59, 193-202.
16. Molina-Barahona L, Rodriguez-Vazquez R, Hemandez-Velasco M, Vega-Jarquin C, Zapata-Perez O, Mendoza-Cant, A, et al. (1998) Diesel removal from contaminated soils by biostimulation and supplementation with crop residues. Applied Soil Ecology 27, 165-75.
17. Joseph PJ, Joseph A. (2009) Microbial enhanced separation of oil from a petroleum refinery sludge. Journal of Hazardous Materials 161, 522-5.
18. Kozliak EI. (2000) Efficient steady-state volatile organic compound removal from air by live bacteria immobilized on fiber supports. Bioremediation Journal 4, 81-96.
19. Rezaei Kalantari R. (2003) The effect of humic compounds on bioremediation of hydrocarbon contaminated soils Tarbiat Modares University, School of engineering.
20. Borresen MH, Rike AG. (2007) Effects of nutrient content, moisture content and salinity on mineralization of hexadecane in an Arctic soil. Cold Regions Science and Technology 48, 129-138.
21. Molina M, Gonzalez N, Bautista L, Sanz R, Simarro R, Sanchez I, et al. (2009) Isolation and genetic identification of PAH degrading bacteria from a microbial consortium. Biodegradation 20, 789-800.
22. Lane D. 16S/23S sequencing. In: Stackebrandt E, Goodfellow M, editors. (1991) Nucleic Acid Techniques in Bacterial Systematics (Modem Microbiological Methods). Chichester - New York - Brisbane - Toronto - Singapore: John Wiley & Sons.
23. Tzintzun-Camacho O, Loera O, Ramirez-Saad HC, Gutierrez-Rojas M. () Comparison of mechanisms of hexadecane uptake among pure and mixed cultures derived from a bacterial consortium. International Biodeterioration & Biodegradation 2012 May; 70(0):1-7.
24. Velasco-Alvarez N, Gonzalez I, mian-Matsumura P, Gutierrez-Rojas M. (2011) Enhanced hexadecane degradation and low biomass production by Aspergillus niger exposed to an electric current in a model system. Bioresource Technology 102, 1509-1515.
25. Zhang K, Hua XF, Han HL, Wang J, Miao CC, Xu YY, et al. (2008) Enhanced bioaugmentation of petroleum-and saltcontaminated soil using wheat straw. Chemosphere 73, 1387-1392.
26. Dibble JR, Bartha R. (1979) Effect of environmental parameters on the biodégradation of oil sludge. Appl Environ Microbiol 37, 729-739.
27. Siddique T, Okeke BC, Arshad M, Frankenberger WT. (2002) Temperature and pH effects on biodégradation of hexachlorocyclohexane isomers in water and a soil slurry. Journal of Agricultural and Food Chemistry 50, 5070-5076.
28. Liu Fy, Hong Mz, Liu Dm, Li Yw, Shou Ps, Yan H, et al. (2007) Biodegradation of methyl parathion by Acinetobacter radioresistens USTB-04. Journal of Environmental Sciences 19, 1257-1260.
29. Bouchez-Naitali M, Vandecasteele JP. (2008) Biosurfactants, an help in the biodégradation of hexadecane? The case of Rhodococcus and Pseudomonas strains. World Journal of Microbiology and Biotechnology 24, 1901-1907.
30. Chayabutra C, Kwang ju L. (2000) Degradation of n-Hexadecane and Its Metabolites by Pseudomonas aeruginosa under Microaerobic and Anaerobic Denitrifying Conditions. Appl Environ Microbiol 66, 493-498.
31. Wongsa P, Tanaka M, Ueno A, Hasanuzzaman M, Yumoto I, Okuyama H. (2004) Isolation and characterization of novel strains of Pseudomonas aeruginosa and Serratia marcescens possessing high efficiency to degrade gasoline, kerosene, diesel oil, and lubricating oil. Current Microbiology 49, 415-422.
32. Karamalidis AK, Evangelou AC, Karabika E, Koukkou AI, Drainas C, Voudrias EA. (2010) Laboratory scale bioremediation of petroleum-contaminated soil by indigenous microorganisms and added Pseudomonas aeruginosa strain Spet. Bioresource Technology 101, 6545-6552.
33. Obayori OS, Adebusoye SA, Adewale AO, Oyetibo GO, Oluyemi OO, Amokun RA, et al. (2009) Differential degradation of crude oil (Bonny Light) by four Pseudomonas strains. Journal of Environmental Sciences 21, 243-248.
34. Song H, Liu Y, Xu W, Zeng G, Aibibu N, Xu L, et al. () Simultaneous Cr (VI) reduction and phenol degradation in pure cultures of Pseudomonas aeruginosa CCTCC AB91095. Bioresource Technology 2009 Nov; 100(21):5079-84.
35. Wang Y, Song J, Zhao W, He X, Chen J, Xiao M. (2011) In situ degradation of phenol and promotion of plant growth in contaminated environments by a single Pseudomonas aeruginosa strain. Journal of Hazardous Materials 192, 354-360.
36. Setti L, Lanzarini G, Pifferi PG, Spagna G. (1993) Further research into the aerobic degradation of n-alkanes in a heavy oil by a pure culture of a Pseudomonas sp. Chemosphere 6, 1151-1157.
37. Bharagava R, Chandra R, Rai V. (2009) Isolation and characterization of aerobic bacteria capable of the degradation of synthetic and natural melanoidins from distillery effluent World Journal of Microbiology and Biotechnology 25, 737-744.
38. Atlas RM, Hazen TC. (2009) Oil Biodegradation and Bioremediation: A Tale of the Two Worst Spills in U. S. History. Environmental Science & Technology 45, 6709-6715.
39. Ulrich A, Guigard S, Foght J, Semple K, Pooley K, Armstrong J, et al. (2009) Effect of salt on aerobic biodégradation of petroleum hydrocarbons in contaminated groundwater. Biodegradation 20, 27-38.
40. Pollard S, Hradey S, Fedorak P. (1994) Bioremediation of petroleum-and creosote-contaminated soils: a review of constraints. Waste Management & Research 12, 173-194.
41. Margesin R, Schinner F. (2001) Biodegradation and bioremediation of hydrocarbons in extreme environments. Applied Microbiology and Biotechnology 56, 650-63.