Adaptive dynamics under development-based genotype-phenotype maps

Nature

Volumn 497, Issue 7449, 2013, Pages 361-364

  Salazar Ciudad, Isaac ^a,b   Marín Riera, Miquel ^b  

^a UNIVERSITY OF HELSINKI   (Finland)

^b UNIVERSITAT AUTÒNOMA DE BARCELONA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

FITNESS; GENETIC ANALYSIS; GENETIC VARIATION; GENOTYPE; MAPPING; NATURAL SELECTION; OPTIMIZATION; PHENOTYPE; SIMULATION; SURFACE ROUGHNESS;

ADAPTATION; ARTICLE; CELL STRUCTURE; GENE MAPPING; GENOTYPE PHENOTYPE CORRELATION; HUMAN; ORGANOGENESIS; PRIORITY JOURNAL;

ADAPTATION, PHYSIOLOGICAL; ALGORITHMS; BIOLOGICAL EVOLUTION; COMPUTER SIMULATION; GENETIC FITNESS; GENOTYPE; MODELS, BIOLOGICAL; PHENOTYPE; POPULATION DENSITY; PRINCIPAL COMPONENT ANALYSIS; SELECTION, GENETIC; TOOTH;

EID: 84878113717     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature12142     Document Type: Article

References (29)

1. Haldane, J. B. S. The Causes of Evolution (Harper Brothers, 1932).
2. Wright, S. The roles of mutation, inbreeding, crossbreeding and selection in evolution. Proc. VI Intern. Congress Genet. 1, 356-366 (1932).
3. Gould, S. J. & Lewontin, R. C. The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist program. Proc. R. Soc. Lond. B 205, 581-598 (1979).
4. Alberch, P. In Evolution and Development Dahlem Konferenzen (ed. Bonner, J. T.) 313-332 (Springer, 1982).
5. Lande, R. & Arnold, S. J. The measurement of selection on correlated characters. Evolution 37, 1210-1226 (1983).
6. Fontana, W. Modelling 'evo-devo' with RNA. Bioessays 24, 1164-1177 (2002).
7. Salazar-Ciudad, I. & Jernvall, J. A computational model of teeth and the developmental origins of morphological variation. Nature 464, 583-586 (2010).
8. Waddington, C. H. The Strategy of the Genes (George Allen and Unwin, 1957).
9. Huynen, M. A., Stadler, P. F. & Fontana, W.Smoothness within ruggedness: the role of neutrality in adaptation. Proc. Natl Acad. Sci. USA 93, 397-401 (1996).
10. Ferrada, E. & Wagner, A. A comparison of genotype-phenotypemaps for RNAand proteins. Biophys. J. 102, 1916-1925 (2012).
11. Salazar-Ciudad, I. Developmental constraints vs. variational properties: how pattern formation can help to understand evolution and development. J. Exp. Zoolog. B 306B, 107-125 (2006).
12. Kauffman, S. A. The Origins of Order (Oxford Univ. Press, 1993).
13. Wagner, A. Evolution of gene networks by gene duplications: a mathematical model and its implications on genome organization. Proc. Natl Acad. Sci. USA 91, 4387-4391 (1994).
14. Hansen, T. F. & Wagner, G. P.Modeling genetic architecture: amultilinear theory of gene interaction. Theor. Popul. Biol. 59, 61-86 (2001).
15. Salazar-Ciudad, I. & Jernvall, J. How different types of pattern formation mechanisms affect the evolution of form and development. Evol. Dev. 6, 6-16 (2004).
16. Evans, A. R. et al. High-level similarity of dentitions in carnivorans and rodents. Nature 445, 78-81 (2007).
17. Orzack, S. H. & Sober, E. Optimalitymodels and the test of adaptationism.Am. Nat. 143, 361-380 (1994).
18. Maynard Smith, J. Optimization theory in evolution. Ann. Rev. Ecol. Syst. 9, 31-56 (1978).
19. Ji, Q. et al. The earliest known eutherian mammal. Nature 416, 816-822 (2002).
20. Charles, C. et al. Regulation of tooth number by fine-tuning levels of receptortyrosine kinase signaling. Development 138, 4063-4073 (2011).
21. Klingenberg, C. P. Morphometrics and the role of the phenotype in studies of the evolution of developmental mechanisms. Gene 287, 3-10 (2002).
22. Bunn, J. M. et al.Comparing Dirichlet normal surface energy of tooth crowns, a new technique of molar shape quantification for dietary inference, with previous methods in isolation and in combination. Am. J. Phys. Anthropol. 145, 247-261 (2011).
23. Alfaro, M. E. et al. Evolutionary consequences of many-to-one mapping of jaw morphology to mechanics in labrid fishes. Am. Nat. 165, E140-E154 (2005).
24. Santana, S. E., Strait, S. & Dumont, E. R. The better to eat you with: functional correlates of tooth structure in bats. Funct. Ecol. 25, 839-847 (2011).
25. Godfrey, L. R. et al. Dental topography indicates ecological contraction of lemur communities. Am. J. Phys. Anthropol. 148, 215-227 (2012).
26. Charlesworth, B. Fundamental concepts in genetics: effective population size and patterns of molecular evolution and variation. Nature Rev. Genet. 10, 195-205 (2009).
27. Tenaillon, O. et al. Quantifying organismal complexity using a population genetic approach. PLoS ONE 2, e217 (2007).
28. Polly, P. D., Le Comber, S. C. & Burland, T. M. On the occlusal fit of tribosphenic molars: Are we underestimating species diversity in the Mesozoic? J. Mamm. Evol. 12, 283-299 (2005).
29. Orr, H. A. The population genetics of adaptation on correlated fitness landscapes: the block model. Evolution 60, 1113-1124 (2006).