Glycerol assimilation and production of 1,3-propanediol by Citrobacter amalonaticus Y19

Applied Microbiology and Biotechnology

Volumn 97, Issue 11, 2013, Pages 5001-5011

  Ainala, Satish Kumar ^a   Ashok, Somasundar ^a   Ko, Yeounjoo ^a   Park, Sunghoon ^a  

^a Pusan National University   (South Korea)

Author keywords

1,3 PDO; Citrobacter amalonaticus Y19; Coenzyme B 12; Glycerol metabolism

Indexed keywords

1,3-PDO; ANAEROBIC CONDITIONS; CITROBACTER AMALONATICUS Y19; GENOME SEQUENCING; KLEBSIELLA PNEUMONIAE; SHAKE-FLASK CULTIVATION; SOLE CARBON SOURCE; WATER-GAS SHIFT REACTION (WGS);

BACTERIA; CARBON MONOXIDE; GENES; HYDROGEN PRODUCTION; METABOLISM; PHYSIOLOGY;

GLYCEROL;

1,3 PROPANEDIOL; CARBON; COBAMAMIDE; CYANOCOBALAMIN; GLYCEROL;

BACTERIUM; CARBON MONOXIDE; ENZYME ACTIVITY; FERMENTATION; GENOME; HYDROGEN; METABOLISM; OXIC CONDITIONS; VITAMIN;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; CARBON SOURCE; CELL GROWTH; CITROBACTER; CITROBACTER AMALONATICUS; CULTURE MEDIUM; ENZYME ACTIVITY; GAMMAPROTEOBACTERIA; GENE SEQUENCE; GENETIC ORGANIZATION; KLEBSIELLA PNEUMONIAE; NONHUMAN; OPERON; SYNTHESIS;

AEROBIOSIS; ANAEROBIOSIS; CITROBACTER; CULTURE MEDIA; GENOME, BACTERIAL; GLYCEROL; METABOLIC NETWORKS AND PATHWAYS; MOLECULAR SEQUENCE DATA; PROPYLENE GLYCOLS; SEQUENCE ANALYSIS, DNA; VITAMIN B 12;

BUTEA MONOSPERMA; CITROBACTER AMALONATICUS; KLEBSIELLA PNEUMONIAE;

EID: 84878011210     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-013-4726-z     Document Type: Article

References (30)

1. Andersson DI, Roth JR (1989) Redox regulation of the genes for cobinamide biosynthesis in Salmonella typhimurium. J Bacteriol 171(12):6734-6739
2. Arasu MV, Kumar V, Ashok S, Song H, Rathnasingh C, Lee HJ, Seung D, Park S (2011) Isolation and characterization of the new Klebsiella pneumoniae J2B strain showing improved growth characteristics with reduced lipopolysaccharide formation. Biotechnol Bioprocess Eng 16(6):1134-1143
3. Ashok S, Mohan Raj S, Ko Y, Sankaranarayanan M, Zhou S, Kumar V, Park S (2012a) Effect of puuC overexpression and nitrate addition on glycerol metabolism and anaerobic 3-hydroxypropionic acid production in recombinant Klebsiella pneumoniae ΔglpKΔdhaT. Metab Eng. doi: 10.1016/j.ymben.2012.09.004
4. Ashok S, Raj SM, Rathnasingh C, Park S (2011) Development of recombinant Klebsiella pneumoniae ΔdhaT strain for the co-production of 3-hydroxypropionic acid and 1,3-propanediol from glycerol. Appl Microbiol Biotechnol 90(4):1253-1265
5. 12 naturally. Biotechnol Bioeng. doi: 10.1002/bit.24726
6. Asnis RE, Brodie AF (1953) A glycerol dehydrogenase from Escherichia coli. J Biol Chem 203(1):153-159
7. 12)-dependent 1, 2-propanediol degradation. J Bacteriol 181(19):5967-5975
8. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
9. 12) biosynthetic operon of Salmonella typhimurium. J Bacteriol 174(1):24-29
10. Ganesh I, Ravikumar S, Hong S (2012) Metabolically engineered Escherichia coli as a tool for the production of bioenergy and biochemicals from glycerol. Biotechnol Bioprocess Eng 17(4):671-678
11. Gonzalez R, Murarka A, Dharmadi Y, Yazdani SS (2008) A new model for the anaerobic fermentation of glycerol in enteric bacteria: trunk and auxiliary pathways in Escherichia coli. Metab Eng 10(5):234-245
12. Hall RH, Stern ES (1950) Acid-catalysed hydration of acrylaldehyde: kinetics of the reaction and isolation of beta-hydroxypropaldehyde. J Chem Soc:490-498
13. + oxidoreductase. J Bacteriol 169(5):2050-2054
14. 12-dependent glycerol dehydratase- and diol dehydratase-encoding genes from metagenomic DNA libraries derived from enrichment cultures. Appl Environ Microbiol 69(6):3048-3060
15. Lee HS, Bae SS, Kim MS, Kwon KK, Kang SG, Lee JH (2011) Complete genome sequence of hyperthermophilic Pyrococcus sp. strain NA2, isolated from a deep-sea hydrothermal vent area. J Bacteriol 193(14):3666-3667
16. Lin EC (1976) Glycerol dissimilation and its regulation in bacteria. Annu Rev Microbiol 30:535-578
17. Perez JM, Arenas FA, Pradenas GA, Sandoval JM, Vasquez CC (2008) Escherichia coli YqhD exhibits aldehyde reductase activity and protects from the harmful effect of lipid peroxidation-derived aldehydes. J Biol Chem 283(12):7346-7353
18. Punta M, Coggill PC, Eberhardt RY, Mistry J, Tate J, Boursnell C, Pang N, Forslund K, Ceric G, Clements J, Heger A, Holm L, Sonnhammer EL, Eddy SR, Bateman A, Finn RD (2012) The Pfam protein families database. Nucleic Acids Res 40:290-301
19. Raj SM, Rathnasingh C, Jo J-E, Park S (2008) Production of 3-hydroxypropionic acid from glycerol by a novel recombinant Escherichia coli BL21 strain. Process Biochem 43(12):1440-1446
20. +-dependent aldehyde dehydrogenase encoded by the puuC gene of Klebsiella pneumoniae DSM 2026 that utilizes 3-hydroxypropionaldehyde as a substrate. Biotechnol Bioprocess Eng 15(1):131-138
21. 12): synthesis and biological significance. Annu Rev Microbiol 50:137-181
22. Saxena RK, Anand P, Saran S, Isar J (2009) Microbial production of 1,3-propanediol: recent developments and emerging opportunities. Biotechnol Adv 27(6):895-913
23. Seo JW, Seo MY, Oh BR, Heo SY, Baek JO, Rairakhwada D, Luo LH, Hong WK, Kim CH (2010) Identification and utilization of a 1,3-propanediol oxidoreductase isoenzyme for production of 1,3-propanediol from glycerol in Klebsiella pneumoniae. Appl Microbiol Biotechnol 85(3):659-666
24. Seo MY, Seo JW, Heo SY, Baek JO, Rairakhwada D, Oh BR, Seo PS, Choi MH, Kim CH (2009) Elimination of by-product formation during production of 1,3-propanediol in Klebsiella pneumoniae by inactivation of glycerol oxidative pathway. Appl Microbiol Biotechnol 84(3):527-534
25. Sun J, van den Heuvel J, Soucaille P, Qu Y, Zeng AP (2003) Comparative genomic analysis of DHA regulon and related genes for anaerobic glycerol metabolism in bacteria. Biotechnol Prog 19(2):263-272
26. Taranto MP, Vera JL, Hugenholtz J, De Valdez GF, Sesma F (2003) Lactobacillus reuteri CRL1098 produces cobalamin. J Bacteriol 185(18):5643-5647
27. Truniger V, Boos W (1994) Mapping and cloning of gldA, the structural gene of the Escherichia coli glycerol dehydrogenase. J Bacteriol 176(6):1796-1800
28. Yarbrough JM, Rake JB, Eagon RG (1980) Bacterial inhibitory effects of nitrite: inhibition of active transport, but not of group translocation, and of intracellular enzymes. Appl Environ Microbiol 39(4):831-834
29. Yasuda S, Mukoyama M, Horikawa H, Toraya T, Morita H (2007) Process for producing 1,3-propanediol and/or 3-hydroxypropionic acid. US patent: US20070148749
30. Yeol Jung G, Rae Kim J, Ok Jung H, Park J-Y, Park S (1999) A new chemoheterotrophic bacterium catalyzing water-gas shift reaction. Biotechnol Lett 21(10):869-873