The interaction between breeding and crop management in improved cotton yield

Field Crops Research

Volumn 148, Issue , 2013, Pages 49-60

  Liu, S M ^a   Constable, G A ^a   Reid, P E ^a   Stiller, W N ^a   Cullis, B R ^a,b  

^a CSIRO   (Australia)

^b UNIVERSITY OF WOLLONGONG   (Australia)

Author keywords

Cotton breeding; Cultivar management interaction; Genetic gain; Genotype environment interaction; Gossypium hirsutum L.; Linear mixed model; Multi environment trials

Indexed keywords

AGRICULTURAL MANAGEMENT; COTTON; CROP YIELD; CULTIVAR; GENETIC VARIATION; GENOTYPE-ENVIRONMENT INTERACTION; REPRODUCTIVE BIOLOGY;

AUSTRALIA;

EID: 84877808563     PISSN: 03784290     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fcr.2013.04.006     Document Type: Article

References (81)

1. Allard R.W. Principles of Plant Breeding 1960, John Wiley & Sons, Inc., New York.
2. Allen S.J. Bacterial Blight of Cotton 1984-85 1986, NSW Department of Agriculture, Biology Branch, pp. 31-32.
3. Allen S.J. The impact of disease incidence and severity on the yield of cotton in Australia. Proceedings of Beltwide Cotton Conferences 2002, J. McRae, D.A. Richter (Eds.).
4. Allen S.J. Fusarium resistance ranking protocol for cotton cultivars in Australia. Proceedings of Beltwide Cotton Conferences 2003, 180-182. D.A. Richter (Ed.).
5. Atlin G.N., Baker R.J., McRae K.B., Lu X. Selection response in subdivided target regions. Crop Sci. 2000, 40:7-13.
6. Bayles M.B., Verhalen L.M., Johnson W.M., Barnes B.R. Trends over time among cotton cultivars released by the Oklahoma agricultural experiment station. Crop Sci. 2005, 45:966-980.
7. Becker H.C., Leon J. Stability analysis in plant breeding. Plant Breeding 1988, 101:1-23.
8. Bridge R.R., Meredith W.R., Chism J.F. Comparative performance of obsolete varieties and current varieties of upland cotton. Crop Sci. 1971, 11:29-32.
9. Bridge R.R., Meredith W.R. Comparative performance of obsolete and current cotton cultivars. Crop Sci. 1983, 23:949-952.
10. Butler D.G., Cullis B., Gilmour A., Gogel B. ASREML-R Reference Manual 2009, Queensland Department of Primary Industries and Fisheries, NSW Department of Primary Industries. The State of Queensland, Department of Primary Industries and Fisheries.
11. Calhoun D.S., Bowman D.T. Techniques for development of new cultivars. Cotton: Origin, History, Technology, and Production 1999, 361-414. John Wiley & Sons, New York. C.W. Smith, J.T. Cothren (Eds.).
12. Calhoun D.S., Bowman D.T., May O.L. Pedigree of Upland and Pima Cotton Cultivars Released between 1970 and 1990. Mississippi Agricultural and Forestry Experiment Station Bulletin 1017 1994, Mississippi State University, Mississippi, pp. 1-42.
13. Campbell B.T., Chee P.W., Lubbers E., Bowman D.T., Meredith W.R., Johnson J., Fraser D.E. Genetic improvement of the Pee Dee cotton germplasm collection following seventy years of plant breeding. Crop Sci. 2011, 51:955-968.
14. Cochran W.G., Cox G.M. Experimental Designs 1964, John Wiley & Sons, New York. 2nd ed.
15. Comstock R.E., Moll R.H. Genotype-environment interactions. Statistical Genetics and Plant Breeding 1963, 164-194. National Academy of Sciences-National Research Council, Washington, DC. W.D. Hanson, H.F. Robinson (Eds.).
16. Constable G.A., Harris N.V., Paull R.E. The effect of planting date on yield and some fibre properties of cotton in the Namoi Valley. Aust. J. Exp. Agric. Anim. Husb. 1976, 16:265-271.
17. Constable G.A. Research's contribution to the evolution of the Australian cotton industry. 4th International Crop Science Congress 2004, 1-9.
18. Constable G.A. Breeding as a business - return on R&D investment in crop improvement. Proceedings of 14th Australasian Plant Breeding Conference and 11th SABRAO Conference 2009.
19. Constable G.A., Shaw A.J. Temperature requirements for cotton. Agfacts Agdex 151/022 1988, 1-4.
20. Constable G.A., Thomson N.J., Reid P.E. Approaches utilized in breeding and development of cotton cultivars in Australia. Genetic Improvement of Cotton: Emerging Technologies 2001, 1-15. Science Publishers, Enfield, NH. J.N. Jenkins, S. Saha (Eds.).
21. Cullis B.R., Smith A.B., Beeck C.P., Cowling W.A. Analysis of yield and oil from a series of canola breeding trials. Part II. Exploring variety by environment interaction using factor analysis. Genome 2010, 53:1002-1016.
22. Cullis B.R., Thomson F.M., Fisher J.A., Gilmour A.R., Thompson R. The analysis of the NSW wheat variety database. II. Variance component estimation. Theor. Appl. Genet. 1996, 92:28-39.
23. Culp T.W., Green C.C. Performance of obsolete and current cultivars and Pee Dee germplasm lines of cotton. Crop Sci. 1992, 32:35-41.
24. Davis D.D., Malm N.R., Roberts C.R., Chew C.F., Barnes C.E., Staten G., Wood R.L. Registration of Acala 1517-70 cotton. Crop Sci. 1978, 18:164.
25. de la Vega A.J., DeLacy I.H., Chapman S.C. Progress over 20 years of sunflower breeding in central Argentina. Field Crops Res. 2007, 100:61-72.
26. DeLacy I.H., Basford K.E., Cooper M., Bull J.K., McLaren C.G. Analysis of multi-environment trials - an historical perspective. Plant Adaptation and Crop Improvement 1996, 39-123. CAB International. M. Cooper, G.L. Hammer (Eds.).
27. Evans L.T. Crop Evolution, Adaptation and Yield 1993, Cambridge University Press, Cambridge.
28. Evans L.T., Fischer R.A. Yield potential: its definition, measurement, and significance. Crop Sci. 1999, 39:1544-1551.
29. Finlay K.W., Wilkinson G.N. The analysis of adaptation in a plant-breeding programme. Aust. J. Agric. Res. 1963, 14:742-754.
30. Fok M.A.C. Cotton yield stagnation: addressing a common effect of various causes. Proceedings of the World Cotton Research Conference-2: New Frontiers Cotton Research 1998, 38-45. P. Petridis, Athens, Greece. F.M. Gillham (Ed.).
31. Gogel B.J., Cullis B.R., Verbyla A.P. REML estimation of multiplicative effects in multi-environment variety trials. Biometrics 1995, 51:744-749.
32. Hearn A.B., Fitt G.P. Cotton cropping systems. Field Crop Ecosystems 1992, 85-142. Elsevier, London. C.J. Pearson (Ed.).
33. Hillocks R.J. Cotton Diseases 1992, CAB International, Wallingford.
34. Llewellyn D., Tyson C., Constable G.A., Duggan B., Beale S., Steel P. Containment of regulated genetically modified cotton in the field. Agric. Ecosyst. Environ. 2007, 121:419-429.
35. Kilby C.R., Tan D.K.Y., Duggan B.L., Constable G.A. Yield components of high-yielding Australian cotton cultivars. 16th Australian Agronomy Conference 2012.
36. Kirkby K.A., Lonergan P.A., Allen S.J. An update on Verticillium wilt in Australia. Proceedings of Beltwide Cotton Conferences 2012, 314-317. S. Boyd, M. Huffman, B. Robertson (Eds.).
37. Mackay I., Horwell A., Garner J., White J., McKee J., Philpott H. Reanalyses of the historical series of UK variety trials to quantify the contributions of genetic and environmental factors to trends and variability in yield over time. Theor. Appl. Genet. 2011, 122:225-238.
38. Mauney J.R., Fry K.E., Guinn G. Relationship of photosynthetic rate to growth and fruiting of cotton, soybean, sorghum, and sunflower. Crop Sci. 1978, 18:259-263.
39. McMahon J., Low A. Growing degree days as measure of temperature effects on cotton. Cot. Grow. Rev. 1972, 49:39-49.
40. Meredith W.R. Quantitative genetics. Cotton 1984, 131-150. ASA, CSSA, SSSA, Madison, WI, USA. R.J. Kohel, C.F. Lewis (Eds.).
41. Meredith W.R. Contributions of Introductions to Cotton Improvement. Use of Plant Introductions in Cultivar Development, Part 1. 1991, Crop Science Society of America, Madison, WI, pp. 127-146.
42. Meredith W.R. Cotton yield progress - why has it reached a plateau?. Better Crops Plant Food 2000, 84:6-9.
43. Meredith W.R., Bridge R. Genetic contributions to yield changes in upland cotton. Genetic Contributions to Yield Gains of Five Major Crop Plants 1984, 75-87. Crop Science Society of America, Madison, WI. W.R. Fehr (Ed.).
44. Meredith W.R., Heitholt J.J., Pettigrew W.T., Rayburn S.T. Comparison of obsolete and modern cotton cultivars at two nitrogen levels. Crop Sci. 1997, 37:1453-1457.
45. Miller P.A. Comparative yields of obsolete and current varieties of upland cotton. Proceedings of Beltwide Cotton Production - Mechanisation Conference, Atlanta, Georgia 1977, 58-61. J.M. Brown (Ed.).
46. Nabugoomu R., Kempton R.A., Talbot M. Analysis of series of trials where varieties differ in sensitivity to locations. J. Agric. Biol. Environ. Stat. 1999, 4:310-325.
47. Patterson H.D., Silvey V., Talbot M., Weatherup S.T.C. Variability of yields of cereal varieties in U.K. trials. J. Agric. Sci. 1977, 89:239-245.
48. Pettigrew W.T., Gerik T.J. Cotton leaf photosynthesis and carbon metabolism. Adv. Agron. 2007, 94:209-236.
49. Piepho H.P. Analyzing genotype-environment data by mixed models with multiplicative terms. Biometrics 1997, 53:761-766.
50. Piepho H.P., Mohring J. Best linear unbiased prediction of cultivar effects for subdivided target regions. Crop Sci. 2005, 45:1151-1159.
51. Ramey H.H. Yield response of six cultivars of upland cotton, Gossypium hirsutum L. in two cultural regimes. Crop Sci. 1972, 12:353-354.
52. R Development Core Team R: A Language and Environment for Statistical Computing 2011, R Foundation for Statistical Computing, Vienna, Austria. http://www.r-project.org/.
53. Reid P.E. CS 50. Plant Var. J. 1992, 5:2.
54. Reid P.E. Siokra L23. Plant Var. J. 1992, 5:2.
55. Reid P.E. Siokra V-15. Plant Var. J. 1995, 8:13.
56. Reid P.E. Sicala V-2. Plant Var. J. 1995, 8:12-13.
57. Reid P.E. Sicot 189. Plant Var. J. 1996, 9:18-19.
58. Reid P.E. Siokra V-16. Plant Var. J. 1998, 11:20.
59. Reid P.E. Sicala 40. Plant Var. J. 1999, 12:23-24.
60. Reid P.E. Siokra V-17. Plant Var. J. 2000, 13:48.
61. Reid P.E. Sicot 53. Plant Var. J. 2000, 13:47-48.
62. Reid P.E. Sicot 70. Plant Var. J. 2001, 14:35-36.
63. Reid P.E. Sicot 80. Plant Var. J. 2002, 15:24.
64. Reid P.E. Sicala 43. Plant Var. J. 2003, 16:35.
65. Reid P.E. Sicot 71. Plant Var. J. 2003, 16:35-36.
66. Reid P.E. Siokra V-18. Plant Var. J. 2003, 16:36.
67. Reid P.E., Thomson N.J., Lawrence P.K., Luckett D.J., McIntyre G.T., Williams E.R. Regional evaluation of cotton cultivars in eastern Australia, 1974-1985. Aust. J. Agric. Res. 1989, 29:679-689.
68. Richmond T.R. Procedures and methods of cotton breeding with special reference to American cultivated species. Adv. Genet. 1951, 4:213-245.
69. Rosenthal W.D., Gerik T.J. Radiation use efficiency among cotton cultivars. Agron. J. 1991, 83:655-658.
70. Schwartz B.M., Smith C.W. Genetic gain in yield potential of upland cotton under varying plant densities. Crop Sci. 2008, 48:601-605.
71. Smith A., Cullis B., Gilmour A. The analysis of crop variety evaluation data in Australia. Aust. NZ J. Stat. 2001, 43:129-145.
72. Smith A.B., Cullis B.R., Thompson R. The analysis of crop cultivar breeding and evaluation trials: an overview of current mixed model approaches. J. Agric. Sci. 2005, 143:449-462.
73. Stiller W.N., Reid P.E. Sicot 73. Plant Var. J. 2005, 18:93-97.
74. Stiller W.N. Sicot 75. Plant Var. J. 2008, 21:190-193.
75. Thomson N.J. Intra-varietal variability and response to single plant selection in Gossypium hirsutum L. I. Phenotypic variability. J. Agric. Sci. 1973, 80:135-145.
76. Thomson N.J. Intra-varietal variability and response to single plant selection in Gossypium hirsutum L. II. Genotypic variability. J. Agric. Sci. 1973, 80:147-160.
77. Thomson N.J., Cunningham R.B. Genotype×environment interactions and evaluation of cotton cultivars. Aust. J. Agric. Res. 1979, 30:105-112.
78. Ward W.T. Soils and Landscapes Near Narrabri and Edgeroi, NSW, with Data Analysis Using Fuzzy k-Means 1999, CSIRO Land and Water.
79. Wells R., Meredith W.R. Comparative growth of obsolete and modern cotton cultivars: II. Reproductive dry matter partitioning. Crop Sci. 1984, 24:863-872.
80. Williams E.R., Luckett D.J., Reid P.E., Thomson N.J. Comparison of locations used in cotton-breeding trials. Aust. J. Exp. Agric. 1992, 32:739-746.
81. Zhang J.F., Lu Y., Adragna H., Hughs E. Genetic improvement of New Mexico Acala cotton germplasm and their genetic diversity. Crop Sci. 2005, 45:2363-2373.