GmNFYA3, a target gene of miR169, is a positive regulator of plant tolerance to drought stress

Plant Molecular Biology

Volumn 82, Issue 1-2, 2013, Pages 113-129

  Ni, Zhiyong ^a   Hu, Zheng ^a   Jiang, Qiyan ^a   Zhang, Hui ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

ABA and salt sensitivity; Drought tolerance; GmNFYA3; miR169; Soybean

Indexed keywords

ABSCISIC ACID; MESSENGER RNA; MICRORNA; NUCLEAR PROTEIN; SODIUM CHLORIDE; VEGETABLE PROTEIN;

ADAPTATION; AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CELL FRACTIONATION; CHEMISTRY; DNA SEQUENCE; DROUGHT; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; GERMINATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGICAL STRESS; PHYSIOLOGY; PLANT GENE; SOYBEAN; TRANSGENIC PLANT;

ABSCISIC ACID; ADAPTATION, PHYSIOLOGICAL; AMINO ACID SEQUENCE; ARABIDOPSIS; BASE SEQUENCE; CLONING, MOLECULAR; DROUGHTS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GERMINATION; MICRORNAS; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PHYLOGENY; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; RNA, MESSENGER; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE; SOYBEANS; STRESS, PHYSIOLOGICAL; SUBCELLULAR FRACTIONS;

ARABIDOPSIS; GLYCINE MAX; NICOTIANA BENTHAMIANA;

EID: 84877593882     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-013-0040-5     Document Type: Article

References (45)

1. Aono M, Kubo A, Saji H, Tanaka K, Kondo N (1993) Enhanced tolerance to photooxidative stress of transgenic Nicotiana tabacum with high chloroplastic glutathione reductase activity. Plant Cell Physiol 34(1): 129-135.
2. Ben-Naim O, Eshed R, Parnis A, Teper-Bamnolker P, Shalit A, Coupland G, Samach A, Lifschitz E (2006) The CCAAT binding factor can mediate interactions between CONSTANS-like proteins and DNA. Plant J 46(3): 462-476. doi: 10. 1111/j. 1365-313X. 2006. 02706. x.
3. Cao S, Kumimoto RW, Siriwardana CL, Risinger JR, Holt BF 3rd (2011) Identification and characterization of NF-Y transcription factor families in the monocot model plant Brachypodium distachyon. PLoS ONE 6(6): e21805. doi: 10. 1371/journal. pone. 0021805.
4. Chen NZ, Zhang XQ, Wei PC, Chen QJ, Ren F, Chen J, Wang XC (2007) AtHAP3b plays a crucial role in the regulation of flowering time in Arabidopsis during osmotic stress. J Biochem Mol Biol 40(6): 1083-1089.
5. Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16(6): 735-743. doi: 10. 1046/j. 1365-313x. 1998. 00343. x.
6. Combier JP, Frugier F, de Billy F, Boualem A, El-Yahyaoui F, Moreau S, Vernie T, Ott T, Gamas P, Crespi M, Niebel A (2006) MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula. Genes Dev 20(22): 3084-3088. doi: 10. 1101/gad. 402806.
7. Ding Z, Li S, An X, Liu X, Qin H, Wang D (2009) Transgenic expression of MYB15 confers enhanced sensitivity to abscisic acid and improved drought tolerance in Arabidopsis thaliana. J Genet Genomics 36(1): 17-29. doi: 10. 1016/S1673-8527(09)60003-5.
8. Finkelstein RR, Gampala SS, Rock CD (2002) Abscisic acid signaling in seeds and seedlings. Plant Cell 14(suppl): S15-S45. doi: 10. 1105/tpc. 010441.
9. Gao T, Wu Y, Zhang Y, Liu L, Ning Y, Wang D, Tong H, Chen S, Chu C, Xie Q (2011) OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice. Plant Mol Biol 76(1-2): 145-156. doi: 10. 1007/s11103-011-9775-z.
10. Gusmaroli G, Tonelli C, Mantovani R (2002) Regulation of novel members of the Arabidopsis thaliana CCAAT-binding nuclear factor Y subunits. Gene 283(1-2): 41-48.
11. Haake V, Cook D, Riechmann JL, Pineda O, Thomashow MF, Zhang JZ (2002) Transcription factor CBF4 is a regulator of drought adaptation in Arabidopsis. Plant Physiol 130(2): 639-648. doi: 10. 1104/pp. 006478.
12. Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27(1): 297-300.
13. Hu H, Dai M, Yao J, Xiao B, Li X, Zhang Q, Xiong L (2006) Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. Proc Natl Acad Sci USA 103(35): 12987-12992. doi: 10. 1073/pnas. 0604882103.
14. Huang XY, Chao DY, Gao JP, Zhu MZ, Shi M, Lin HX (2009) A previously unknown zinc finger protein, DST, regulates drought and salt tolerance in rice via stomatal aperture control. Genes Dev 23(15): 1805-1817. doi: 10. 1101/gad. 1812409.
15. Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2006) Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice. Plant Cell Physiol 47(1): 141-153. doi: 10. 1093/pcp/pci230.
16. Jefferson R, Kavanagh T, Bevan M (1987) GUS fusions:ß-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6(13): 3901-3907.
17. Jones-Rhoades MW, Bartel DP (2004) Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol Cell 14(6): 787-799. doi: 10. 1016/j. molcel. 2004. 05. 027.
18. Kang JY, Choi HI, Im MY, Kim SY (2002) Arabidopsis basic leucine zipper proteins that mediate stress-responsive abscisic acid signaling. Plant Cell 14(2): 343-357. doi: 10. 1105/Tpc. 010362.
19. Kasuga M, Liu Q, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat Biotechnol 17(3): 287-291. doi: 10. 1038/7036.
20. Ko JH, Yang SH, Han KH (2006) Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis. Plant J 47(3): 343-355. doi: 10. 1111/j. 1365-313X. 2006. 02782. x.
21. Lee H, Fischer RL, Goldberg RB, Harada JJ (2003) Arabidopsis LEAFY COTYLEDON1 represents a functionally specialized subunit of the CCAAT binding transcription factor. Proc Natl Acad Sci USA 100(4): 2152-2156. doi: 10. 1073/pnas. 0437909100.
22. Léon-Kloosterziel KM, Gil MA, Ruijs GJ, Jacobsen SE, Olszewski NE, Schwartz SH, Zeevaart JAD, Koornneef M (1996) Isolation and characterization of abscisic acid-deficient Arabidopsis mutants at two new loci. Plant J 10(4): 655-661. doi: 10. 1046/j. 1365-313X. 1996. 10040655. x.
23. Li H, Sun J, Xu Y, Jiang H, Wu X, Li C (2007) The bHLH-type transcription factor AtAIB positively regulates ABA response in Arabidopsis. Plant Mol Biol 65(5): 655-665. doi: 10. 1007/s11103-007-9230-3.
24. Li WX, Oono Y, Zhu J, He XJ, Wu JM, Iida K, Lu XY, Cui X, Jin H, Zhu JK (2008) The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. Plant Cell 20(8): 2238-2251. doi: 10. 1105/tpc. 108. 059444.
25. Liang M, Hole D, Wu J, Blake T, Wu Y (2012) Expression and functional analysis of NUCLEAR FACTOR-Y, subunit B genes in barley. Planta 235(4): 779-791. doi: 10. 1007/s00425-011-1539-0.
26. Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25(4): 402-408. doi: 10. 1006/meth. 2001. 1262.
27. Llave C, Xie Z, Kasschau KD, Carrington JC (2002) Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297(5589): 2053-2056. doi: 10. 1126/science. 1076311.
28. Mantovani R (1999) The molecular biology of the CCAAT-binding factor NF-Y. Gene 239(1): 15-27.
29. Merlot S, Gosti F, Guerrier D, Vavasseur A, Giraudat J (2001) The ABI1 and ABI2 protein phosphatases 2C act in a negative feedback regulatory loop of the abscisic acid signalling pathway. Plant J 25(3): 295-303.
30. Najafabadi MS (2012) Improving rice (Oryza sativa L.) drought tolerance by suppressing a NF-YA transcription factor. Iran. J Biotechnol 10(1): 40-48.
31. Nelson DE, Repetti PP, Adams TR, Creelman RA, Wu J, Warner DC, Anstrom DC, Bensen RJ, Castiglioni PP, Donnarummo MG, Hinchey BS, Kumimoto RW, Maszle DR, Canales RD, Krolikowski KA, Dotson SB, Gutterson N, Ratcliffe OJ, Heard JE (2007) Plant nuclear factor Y (NF-Y) B subunits confer drought tolerance and lead to improved corn yields on water-limited acres. Proc Natl Acad Sci USA 104(42): 16450-16455. doi: 10. 1073/pnas. 0707193104.
32. Oh SJ, Song SI, Kim YS, Jang HJ, Kim SY, Kim M, Kim YK, Nahm BH, Kim JK (2005) Arabidopsis CBF3/DREB1A and ABF3 in transgenic rice increased tolerance to abiotic stress without stunting growth. Plant Physiol 138(1): 341-351. doi: 10. 1104/pp. 104. 059147.
33. Stephenson TJ, McIntyre CL, Collet C, Xue GP (2007) Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum. Plant Mol Biol 65(1-2): 77-92. doi: 10. 1007/s11103-007-9200-9.
34. Thao NP, Tran LS (2012) Potentials toward genetic engineering of drought-tolerant soybean. Crit Rev Biotechnol 32(4): 349-362. doi: 10. 3109/07388551. 2011. 643463.
35. Thirumurugan T, Ito Y, Kubo T, Serizawa A, Kurata N (2008) Identification, characterization and interaction of HAP family genes in rice. Mol Genet Genomics 279(3): 279-289. doi: 10. 1007/s00438-007-0312-3.
36. Tian AG, Wang J, Cui P, Han YJ, Xu H, Cong LJ, Huang XG, Wang XL, Jiao YZ, Wang BJ, Wang YJ, Zhang JS, Chen SY (2004) Characterization of soybean genomic features by analysis of its expressed sequence tags. Theor Appl Genet 108(5): 903-913. doi: 10. 1007/s00122-003-1499-2.
37. Werner JE, Finkelstein RR (1995) Arabidopsis mutants with reduced response to NaCl and osmotic-stress. Physiol Plant 93(4): 659-666. doi: 10. 1111/j. 1399-3054. 1995. tb05114. x.
38. Xiong L, Lee B, Ishitani M, Lee H, Zhang C, Zhu JK (2001) FIERY1 encoding an inositol polyphosphate 1-phosphatase is a negative regulator of abscisic acid and stress signaling in Arabidopsis. Genes Dev 15(15): 1971-1984. doi: 10. 1101/gad. 891901.
39. Yamaguchi-Shinozaki K, Shinozaki K (1994) A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6(2): 251-264.
40. Yamaguchi-Shinozaki K, Shinozaki K (2005) Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters. Trends Plant Sci 10(2): 88-94. doi: 10. 1016/j. tplants. 2004. 12. 012.
41. Yoo CY, Pence HE, Jin JB, Miura K, Gosney MJ, Hasegawa PM, Mickelbart MV (2010) The Arabidopsis GTL1 transcription factor regulates water use efficiency and drought tolerance by modulating stomatal density via transrepression of SDD1. Plant Cell 22(12): 4128-4141. doi: 10. 1105/tpc. 110. 078691.
42. Zhang Y, Yang C, Li Y, Zheng N, Chen H, Zhao Q, Gao T, Guo H, Xie Q (2007) SDIR1 is a RING finger E3 ligase that positively regulates stress-responsive abscisic acid signaling in Arabidopsis. Plant Cell 19(6): 1912-1929. doi: 10. 1105/tpc. 106. 048488.
43. Zhao B, Ge L, Liang R, Li W, Ruan K, Lin H, Jin Y (2009) Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor. BMC Mol Biol 10: 29. doi: 10. 1186/1471-2199-10-29.
44. Zhu JK (2000) Genetic analysis of plant salt tolerance using Arabidopsis. Plant Physiol 124(3): 941-948.
45. Zhu JK (2002) Salt and drought stress signal transduction in plants. Annu Rev Plant Biol 53: 247-273. doi: 10. 1146/annurev. arplant. 53. 091401. 143329.