Expression of phosphatase of regenerating liver family genes during embryogenesis: An evolutionary developmental analysis among Drosophila, amphioxus, and zebrafish

BMC Developmental Biology

Volumn 13, Issue 1, 2013, Pages

  Lin, Ming Der ^a   Lee, Hsun Tzu ^d   Wang, Szu Chieh ^a   Li, Han Ru ^c   Hsien, Hsin Lun ^a   Cheng, Kai Wen ^d   Chang, Yu Di ^a   Huang, Min Lang ^b   Yu, Jr Kai ^c   Chen, Yau Hung ^d  

^a TZU CHI UNIVERSITY   (Taiwan)

^b NATIONAL CHUNG CHENG UNIVERSITY   (Taiwan)

^c INSTITUTE OF CELLULAR AND ORGANISMIC BIOLOGY   (Taiwan)

^d TAMKANG UNIVERSITY   (Taiwan)

Author keywords

Amphioxus; Drosophila; Embryogenesis; Phosphatase of regenerating liver; PTP4A; Zebrafish

Indexed keywords

ANIMALIA; BRANCHIOSTOMA; BRANCHIOSTOMA LANCEOLATUM; DANIO RERIO; IVA;

MESSENGER RNA; PROTEIN TYROSINE PHOSPHATASE;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CELL LINEAGE; CELL MEMBRANE; CHEMISTRY; CHORDATA; DROSOPHILA; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; PHYLOGENY; PRENATAL DEVELOPMENT; SEQUENCE HOMOLOGY; ZEBRA FISH;

AMINO ACID SEQUENCE; ANIMALS; CELL LINEAGE; CELL MEMBRANE; CHORDATA; DROSOPHILA; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN TYROSINE PHOSPHATASES; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; ZEBRAFISH;

EID: 84876993967     PISSN: None     EISSN: 1471213X     Source Type: Journal    
DOI: 10.1186/1471-213X-13-18     Document Type: Article

References (37)

1. PRL-1, a unique nuclear protein tyrosine phosphatase, affects cell growth. Diamond RH, Cressman DE, Laz TM, Abrams CS, Taub R, Mol Cell Biol 1994 14 3752 3762 8196618 (Pubitemid 24160782)
2. The immediate-early growth response in regenerating liver and insulin-stimulated H-35 cells: comparison with serum-stimulated 3T3 cells and identification of 41 novel immediate-early genes. Mohn KL, Laz TM, Hsu JC, Melby AE, Bravo R, Taub R, Mol Cell Biol 1991 11 381 390 1986233 (Pubitemid 21895216)
3. Mouse PRL-2 and PRL-3, two potentially prenylated protein tyrosine phosphatases homologous to PRL-1. Zeng Q, Hong W, Tan YH, Biochem Biophys Res Commun 1998 244 421 427 10.1006/bbrc.1998.8291 9514946 (Pubitemid 28414098)
4. PRL PTPs: mediators and markers of cancer progression. Bessette DC, Qiu D, Pallen CJ, Cancer Metastasis Rev 2008 27 231 252 10.1007/s10555-008-9121-3 18224294
5. High expression of PRL-3 promotes cancer cell motility and liver metastasis in human colorectal cancer: a predictive molecular marker of metachronous liver and lung metastases. Kato H, Semba S, Miskad UA, Seo Y, Kasuga M, Yokozaki H, Clin Cancer Res 2004 10 7318 7328 10.1158/1078-0432.CCR- 04-0485 15534108 (Pubitemid 39487721)
6. Generation of PRL-3- and PRL-1-specific monoclonal antibodies as potential diagnostic markers for cancer metastases. Li J, Guo K, Koh VW, Tang JP, Gan BQ, Shi H, Li HX, Zeng Q, Clin Cancer Res 2005 11 2195 2204 10.1158/1078-0432.CCR-04-1984 15788667 (Pubitemid 40490178)
7. Identification of differentially expressed genes in pancreatic cancer cells using cDNA microarray. Han H, Bearss DJ, Browne LW, Calaluce R, Nagle RB, Von Hoff DD, Cancer Res 2002 62 2890 2896 12019169 (Pubitemid 34525776)
8. The tyrosine phosphatase PRL-1 localizes to the endoplasmic reticulum and the mitotic spindle and is required for normal mitosis. Wang J, Kirby CE, Herbst R, J Biol Chem 2002 277 46659 46668 10.1074/jbc.M206407200 12235145 (Pubitemid 35417667)
9. Analysis of stromal-epithelial interactions in prostate cancer identifies PTPCAAX2 as a potential oncogene. Wang Q, Holmes DI, Powell SM, Lu QL, Waxman J, Cancer Lett 2002 175 63 69 10.1016/S0304-3835(01)00703-0 11734337 (Pubitemid 33153045)
10. Overexpression of the protein tyrosine phosphatase PRL-2 correlates with breast tumor formation and progression. Hardy S, Wong NN, Muller WJ, Park M, Tremblay ML, Cancer Res 2010 70 8959 8967 10.1158/0008-5472.CAN-10-2041 20841483
11. Expression and prognostic impact of the protein tyrosine phosphatases PRL-1, PRL-2, and PRL-3 in breast cancer. Radke I, Gotte M, Kersting C, Mattsson B, Kiesel L, Wulfing P, Br J Cancer 2006 95 347 354 10.1038/sj.bjc.6603261 16832410 (Pubitemid 44187596)
12. PRL phosphatases as potential molecular targets in cancer. Stephens BJ, Han H, Gokhale V, Von Hoff DD, Mol Cancer Ther 2005 4 1653 1661 10.1158/1535-7163.MCT-05-0248 16275986 (Pubitemid 41685299)
13. PRL-1, a protein tyrosine phosphatase, is expressed in neurons and oligodendrocytes in the brain and induced in the cerebral cortex following transient forebrain ischemia. Takano S, Fukuyama H, Fukumoto M, Kimura J, Xue JH, Ohashi H, Fujita J, Brain Res Mol Brain Res 1996 40 105 115 10.1016/0169-328X(96)00035-6 8840018 (Pubitemid 26241791)
14. Expression of PRL-1 nuclear PTPase is associated with proliferation in liver but with differentiation in intestine. Diamond RH, Peters C, Jung SP, Greenbaum LE, Haber BA, Silberg DG, Traber PG, Taub R, Am J Physiol 1996 271 121 G129 8760115
15. PRL-1 PTPase expression is developmentally regulated with tissue-specific patterns in epithelial tissues. Kong W, Swain GP, Li S, Diamond RH, Am J Physiol Gastrointest Liver Physiol 2000 279 613 G621 10960362
16. Expression of a novel rat protein tyrosine phosphatase gene. Carter DA, Biochim Biophys Acta 1998 1442 405 408 10.1016/S0167-4781(98)00173-0 9805001 (Pubitemid 28530834)
17. PRL-3 initiates tumor angiogenesis by recruiting endothelial cells in vitro and in vivo. Guo K, Li J, Wang H, Osato M, Tang JP, Quah SY, Gan BQ, Zeng Q, Cancer Res 2006 66 9625 9635 10.1158/0008-5472.CAN-06-0726 17018620 (Pubitemid 44623662)
18. Developmental expression of the murine Prl-1 protein tyrosine phosphatase gene. Rundle CH, Kappen C, J Exp Zool 1999 283 612 617 10.1002/(SICI)1097- 010X(19990501)283:6<612::AID-JEZ14>3.0.CO;2-X 10194868 (Pubitemid 29167379)
19. Prenylation-dependent association of protein-tyrosine phosphatases PRL-1, -2, and -3 with the plasma membrane and the early endosome. Zeng Q, Si X, Horstmann H, Xu Y, Hong W, Pallen CJ, J Biol Chem 2000 275 21444 21452 10.1074/jbc.M000453200 10747914 (Pubitemid 30481847)
20. Cellular localization of PRL-1 and PRL-2 gene expression in normal adult human tissues. Dumaual CM, Sandusky GE, Crowell PL, Randall SK, J Histochem Cytochem 2006 54 1401 1412 10.1369/jhc.6A7019.2006 16957164 (Pubitemid 44788825)
21. Role of PRL-3, a human muscle-specific tyrosine phosphatase, in angiotensin-II signaling. Matter WF, Estridge T, Zhang C, Belagaje R, Stancato L, Dixon J, Johnson B, Bloem L, Pickard T, Donaghue M, Biochem Biophys Res Commun 2001 283 1061 1068 10.1006/bbrc.2001.4881 11355880 (Pubitemid 32912875)
22. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Saitou N, Nei M, Mol Biol Evol 1987 4 406 425 3447015
23. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, Mol Biol Evol 2011 28 2731 2739 10.1093/molbev/msr121 21546353
24. Protein tyrosine phosphatases: structure and function, substrate specificity, and inhibitor development. Zhang ZY, Annu Rev Pharmacol Toxicol 2002 42 209 234 10.1146/annurev.pharmtox.42.083001.144616 11807171 (Pubitemid 34160526)
25. Protein-tyrosine phosphatases: biological function, structural characteristics, and mechanism of catalysis. Zhang ZY, Crit Rev Biochem Mol Biol 1998 33 1 52 10.1080/10409239891204161 9543627 (Pubitemid 28124251)
26. Prenylation of oncogenic human PTP(CAAX) protein tyrosine phosphatases. Cates CA, Michael RL, Stayrook KR, Harvey KA, Burke YD, Randall SK, Crowell PL, Crowell DN, Cancer Lett 1996 110 49 55 10.1016/S0304-3835(96)04459-X 9018080 (Pubitemid 27042920)
27. Phosphatase activity, trimerization, and the C-terminal polybasic region are all required for PRL1-mediated cell growth and migration. Sun JP, Luo Y, Yu X, Wang WQ, Zhou B, Liang F, Zhang ZY, J Biol Chem 2007 282 29043 29051 10.1074/jbc.M703537200 17656357 (Pubitemid 47606021)
28. Interaction of farnesylated PRL-2, a protein-tyrosine phosphatase, with the beta-subunit of geranylgeranyltransferase II. Si X, Zeng Q, Ng CH, Hong W, Pallen CJ, J Biol Chem 2001 276 32875 32882 10.1074/jbc.M010400200 11447212
29. The amphioxus genome and the evolution of the chordate karyotype. Putnam NH, Butts T, Ferrier DE, Furlong RF, Hellsten U, Kawashima T, Robinson-Rechavi M, Shoguchi E, Terry A, Yu JK, Nature 2008 453 1064 1071 10.1038/nature06967 18563158 (Pubitemid 351888243)
30. Whole mount RNA fluorescent in situ hybridization of drosophila embryos. Legendre F, Cody N, Iampietro C, Bergalet J, Lefebvre FA, Moquin-Beaudry G, Zhang O, Wang X, Lecuyer E, J Vis Exp 2013 71 50057 10.3791/50057 23407302
31. Novel and unexpected functions of zebrafish CCAAT box binding transcription factor (NF-Y) B subunit during cartilages development. Chen YH, Lin YT, Lee GH, Bone 2009 44 777 784 10.1016/j.bone.2009.01.374 19442608
32. Stages of embryonic development of the zebrafish. Kimmel CB, Ballard WW, Kimmel SR, Ullmann B, Schilling TF, Dev Dyn 1995 203 253 310 10.1002/aja.1002030302 8589427
33. Nephrotoxicity assessments of acetaminophen during zebrafish embryogenesis. Peng HC, Wang YH, Wen CC, Wang WH, Cheng CC, Chen YH, Comp Biochem Physiol C Toxicol Pharmacol 2010 151 480 486 10.1016/j.cbpc.2010.02.004 20170747
34. A cDNA resource for the cephalochordate amphioxus Branchiostoma floridae. Yu JK, Wang MC, Shin I, Kohara Y, Holland LZ, Satoh N, Satou Y, Dev Genes Evol 2008 218 723 727 10.1007/s00427-008-0228-x 18773220
35. Cephalochordate (amphioxus) embryos: procurement, culture, and basic methods. Holland LZ, Yu JK, Methods Cell Biol 2004 74 195 215 15575608
36. Asymmetric localization of germline markers vasa and nanos during early development in the amphioxus Branchiostoma floridae. Wu HR, Chen YT, Su YH, Luo YJ, Holland LZ, Yu JK, Dev Biol 2011 353 147 159 10.1016/j.ydbio.2011.02.014 21354126
37. BMP and delta/notch signaling control the development of amphioxus epidermal sensory neurons: insights into the evolution of the peripheral sensory system. Lu TM, Luo YJ, Yu JK, Development 2012 139 2020 2030 10.1242/dev.073833 22535413