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Volumn 5, Issue 2, 2013, Pages 327-330

Molecular forensics in the precious Mediterranean red coral, Corallium rubrum: Testing DNA extraction and microsatellite genotyping using dried colonies

Author keywords

Corallium rubrum; Degraded DNA; DNA extraction; Dried tissues; Genotyping; Microsatellites; Poaching

Indexed keywords

ANTHOZOA; CORALLIUM RUBRUM;

EID: 84876858517     PISSN: 18777252     EISSN: 18777260     Source Type: Journal    
DOI: 10.1007/s12686-012-9795-2     Document Type: Article
Times cited : (9)

References (20)
  • 1
    • 79960985316 scopus 로고    scopus 로고
    • Phylogeography of the red coral (Corallium rubrum): inferences on the evolutionary history of a temperate gorgonian
    • Aurelle D, Ledoux JB, Rocher C, Borsa P, Chenuil A, Féral JP (2011) Phylogeography of the red coral (Corallium rubrum): inferences on the evolutionary history of a temperate gorgonian. Genetica 139: 855-869.
    • (2011) Genetica , vol.139 , pp. 855-869
    • Aurelle, D.1    Ledoux, J.B.2    Rocher, C.3    Borsa, P.4    Chenuil, A.5    Féral, J.P.6
  • 2
    • 74049135298 scopus 로고    scopus 로고
    • Rate and extent of decline in Corallium (pink and red coral) populations: existing data meet the requirements for a CITES Appendix II listing
    • Bruckner AW (2009) Rate and extent of decline in Corallium (pink and red coral) populations: existing data meet the requirements for a CITES Appendix II listing. Mar Ecol Prog Ser 397: 319-332.
    • (2009) Mar Ecol Prog Ser , vol.397 , pp. 319-332
    • Bruckner, A.W.1
  • 3
    • 33746285615 scopus 로고    scopus 로고
    • Evaluation of the utility of COI and ITS markers as tools for population genetic studies of temperate gorgonians
    • Calderon I, Garrabou J, Aurelle A (2006) Evaluation of the utility of COI and ITS markers as tools for population genetic studies of temperate gorgonians. J Exp Mar Biol Ecol 336: 184-197.
    • (2006) J Exp Mar Biol Ecol , vol.336 , pp. 184-197
    • Calderon, I.1    Garrabou, J.2    Aurelle, A.3
  • 4
    • 54249153312 scopus 로고    scopus 로고
    • Effects of microsatellite null alleles on assignment testing
    • Carlsson J (2008) Effects of microsatellite null alleles on assignment testing. J Hered 99: 616-623.
    • (2008) J Hered , vol.99 , pp. 616-623
    • Carlsson, J.1
  • 5
    • 33847668722 scopus 로고    scopus 로고
    • Microsatellite null alleles and estimation of population differentiation
    • Chapuis MP, Estoup A (2007) Microsatellite null alleles and estimation of population differentiation. Mol Biol Evol 24: 621-631.
    • (2007) Mol Biol Evol , vol.24 , pp. 621-631
    • Chapuis, M.P.1    Estoup, A.2
  • 6
    • 33646889556 scopus 로고    scopus 로고
    • Development of microsatellite markers for the Mediterranean gorgonian coral Corallium rubrum
    • Costantini F, Abbiati M (2006) Development of microsatellite markers for the Mediterranean gorgonian coral Corallium rubrum. Mol Ecol Notes 6: 521-523.
    • (2006) Mol Ecol Notes , vol.6 , pp. 521-523
    • Costantini, F.1    Abbiati, M.2
  • 7
    • 37249045459 scopus 로고    scopus 로고
    • Genetic structuring of the temperate gorgonian coral (Corallium rubrum) across the western Mediterranean Sea revealed by microsatellites and nuclear sequences
    • Costantini F, Fauvelot C, Abbiatti M (2007) Genetic structuring of the temperate gorgonian coral (Corallium rubrum) across the western Mediterranean Sea revealed by microsatellites and nuclear sequences. Mol Ecol 16: 5168-5182.
    • (2007) Mol Ecol , vol.16 , pp. 5168-5182
    • Costantini, F.1    Fauvelot, C.2    Abbiatti, M.3
  • 8
    • 80255131372 scopus 로고    scopus 로고
    • Low connectivity and declining genetic variability along a depth gradient in Corallium rubrum populations
    • Costantini F, Rossi S, Pintus E, Cerrano C, Gili JM, Abbiati M (2011) Low connectivity and declining genetic variability along a depth gradient in Corallium rubrum populations. Coral Reefs 30: 991-1003.
    • (2011) Coral Reefs , vol.30 , pp. 991-1003
    • Costantini, F.1    Rossi, S.2    Pintus, E.3    Cerrano, C.4    Gili, J.M.5    Abbiati, M.6
  • 9
    • 64949203781 scopus 로고    scopus 로고
    • Mass mortality in northwestern Mediterranean rocky benthic communities: effects of the 2003 heat wave
    • Garrabou J, Coma R, Bally M, Bensoussan N, Chevaldonné P, Cigliano M et al (2009) Mass mortality in northwestern Mediterranean rocky benthic communities: effects of the 2003 heat wave. Global Change Biol 15: 1090-1103.
    • (2009) Global Change Biol , vol.15 , pp. 1090-1103
    • Garrabou, J.1    Coma, R.2    Bally, M.3    Bensoussan, N.4    Chevaldonné, P.5    Cigliano, M.6
  • 10
    • 13444282592 scopus 로고    scopus 로고
    • Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion
    • Hoffman JI, Amos W (2005) Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion. Mol Ecol 14: 599-612.
    • (2005) Mol Ecol , vol.14 , pp. 599-612
    • Hoffman, J.I.1    Amos, W.2
  • 11
    • 77749301207 scopus 로고    scopus 로고
    • Genetic survey of shallow populations of the Mediterranean red coral [Corallium rubrum (Linnaeus, 1758)]: new insights into evolutionary processes shaping nuclear diversity and implications for conservation
    • Ledoux JB, Mokthar-Jamai K, Roby C, Feral JP, Garrabou J, Aurelle D (2010a) Genetic survey of shallow populations of the Mediterranean red coral [Corallium rubrum (Linnaeus, 1758)]: new insights into evolutionary processes shaping nuclear diversity and implications for conservation. Mol Ecol 19: 675-690.
    • (2010) Mol Ecol , vol.19 , pp. 675-690
    • Ledoux, J.B.1    Mokthar-Jamai, K.2    Roby, C.3    Feral, J.P.4    Garrabou, J.5    Aurelle, D.6
  • 12
    • 77957243322 scopus 로고    scopus 로고
    • Fine-scale genetic structure and inferences on population biology in the threatened Mediterranean red coral, Corallium rubrum
    • Ledoux JB, Garrabou J, Bianchimani O, Drap P, Feral JP, Aurelle D (2010b) Fine-scale genetic structure and inferences on population biology in the threatened Mediterranean red coral, Corallium rubrum. Mol Ecol 19: 4204-4216.
    • (2010) Mol Ecol , vol.19 , pp. 4204-4216
    • Ledoux, J.B.1    Garrabou, J.2    Bianchimani, O.3    Drap, P.4    Feral, J.P.5    Aurelle, D.6
  • 13
    • 84856317226 scopus 로고    scopus 로고
    • Assessing the effectiveness of marine reserves on unsustainably harvested long-lived sessile invertebrates
    • Linares C, Garrabou J, Hereu B, Diaz D, Marschal C, Sala E, Zabala M (2012) Assessing the effectiveness of marine reserves on unsustainably harvested long-lived sessile invertebrates. Conserv Biol 26: 88-96.
    • (2012) Conserv Biol , vol.26 , pp. 88-96
    • Linares, C.1    Garrabou, J.2    Hereu, B.3    Diaz, D.4    Marschal, C.5    Sala, E.6    Zabala, M.7
  • 14
    • 0036268487 scopus 로고    scopus 로고
    • Detecting wildlife poaching: identifying the origin of individuals with Bayesian assignment tests and multilocus génotypes
    • Manel S, Berthier P, Luikart G (2002) Detecting wildlife poaching: identifying the origin of individuals with Bayesian assignment tests and multilocus génotypes. Conserv Biol 16: 650-659.
    • (2002) Conserv Biol , vol.16 , pp. 650-659
    • Manel, S.1    Berthier, P.2    Luikart, G.3
  • 15
    • 0024284028 scopus 로고
    • A simple salting out procedure for extracting DNA from human nucleated cells
    • Miller SA, Dykes DD, Polesky HF (1988) A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16: 1215.
    • (1988) Nucleic Acids Res , vol.16 , pp. 1215
    • Miller, S.A.1    Dykes, D.D.2    Polesky, H.F.3
  • 16
    • 78149440967 scopus 로고    scopus 로고
    • Isolation by distance across the Hawaiian Archipelago in the reef-building coral Porites lobata
    • Polato NR, Conception GT, Toonen RJ, Baums IB (2010) Isolation by distance across the Hawaiian Archipelago in the reef-building coral Porites lobata. Mol Ecol 19: 4661-4677.
    • (2010) Mol Ecol , vol.19 , pp. 4661-4677
    • Polato, N.R.1    Conception, G.T.2    Toonen, R.J.3    Baums, I.B.4
  • 18
    • 0242485246 scopus 로고    scopus 로고
    • Microsatellite amplification from museum feather samples: effects of fragment size and template concentration on genotyping errors
    • Sefc KM, Payne RB, Sorenson MD (2003) Microsatellite amplification from museum feather samples: effects of fragment size and template concentration on genotyping errors. Auk 120: 982-989.
    • (2003) Auk , vol.120 , pp. 982-989
    • Sefc, K.M.1    Payne, R.B.2    Sorenson, M.D.3
  • 19
    • 33645894192 scopus 로고    scopus 로고
    • Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers
    • Selkoe KA, Toonen RJ (2006) Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecol Lett 9: 615-629.
    • (2006) Ecol Lett , vol.9 , pp. 615-629
    • Selkoe, K.A.1    Toonen, R.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.